Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 97.83 | 97.83 |
| Bra005374.1-P | Field mustard | plasma membrane, plastid, vacuole | 97.01 | 97.01 |
| AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 75.82 | 73.81 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 36.14 | 39.23 |
| CDY03116 | Canola | plasma membrane | 36.96 | 38.53 |
| CDY12022 | Canola | plasma membrane | 36.68 | 38.24 |
| CDY05049 | Canola | plasma membrane | 30.16 | 38.01 |
| CDX75097 | Canola | extracellular | 13.86 | 36.96 |
| CDY48058 | Canola | extracellular | 13.32 | 35.51 |
| CDX82175 | Canola | extracellular | 21.2 | 33.33 |
| CDY53236 | Canola | plasma membrane | 31.25 | 33.14 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 25.54 | 32.19 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 30.16 | 32.17 |
| CDX82176 | Canola | extracellular | 31.52 | 31.78 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.89 | 31.43 |
| CDY39477 | Canola | extracellular | 26.36 | 31.29 |
| CDX99986 | Canola | plasma membrane | 29.62 | 31.23 |
| CDX90377 | Canola | extracellular, golgi | 26.09 | 31.17 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 29.08 | 31.1 |
| CDX80653 | Canola | plasma membrane | 25.54 | 31.02 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 26.36 | 30.99 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 26.36 | 30.99 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 29.35 | 30.59 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.27 | 30.59 |
| CDY31686 | Canola | nucleus | 8.7 | 30.48 |
| CDY21367 | Canola | golgi, plasma membrane | 30.98 | 30.32 |
| CDY62007 | Canola | golgi, plasma membrane | 30.98 | 30.32 |
| CDY18787 | Canola | plasma membrane | 31.79 | 30.23 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 31.79 | 30.23 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 32.07 | 30.1 |
| CDY25038 | Canola | plasma membrane | 30.16 | 30.0 |
| CDX82179 | Canola | plasma membrane | 28.53 | 29.91 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 24.73 | 29.84 |
| CDY70284 | Canola | plasma membrane | 31.52 | 29.82 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.41 | 29.58 |
| Zm00001d005936_P001 | Maize | plasma membrane | 31.52 | 29.52 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 30.71 | 29.43 |
| CDX86163 | Canola | plasma membrane | 23.91 | 29.33 |
| CDY03652 | Canola | plasma membrane | 31.25 | 29.04 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 31.25 | 29.04 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 31.25 | 28.97 |
| CDY03651 | Canola | plasma membrane | 31.52 | 28.78 |
| GSMUA_Achr10P... | Banana | plasma membrane | 29.62 | 28.09 |
| CDY05577 | Canola | plasma membrane | 29.08 | 28.01 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 16.03 | 27.83 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 30.98 | 27.67 |
| Zm00001d020789_P001 | Maize | plasma membrane | 29.89 | 27.64 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 28.8 | 27.46 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 23.37 | 27.3 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 20.65 | 26.48 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 20.65 | 26.48 |
| EES18560 | Sorghum | golgi, plasma membrane | 27.99 | 26.21 |
| GSMUA_AchrUn_... | Banana | plastid | 25.54 | 26.11 |
| Zm00001d031261_P001 | Maize | golgi | 26.63 | 25.99 |
| EER92732 | Sorghum | golgi | 25.82 | 25.82 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 27.17 | 25.77 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 24.73 | 25.63 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 24.73 | 25.63 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 27.99 | 25.5 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 24.73 | 25.49 |
| TraesCS6D01G113000.1 | Wheat | golgi | 27.72 | 25.44 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 16.3 | 25.32 |
| CDY35174 | Canola | plasma membrane | 19.29 | 25.27 |
| Os03t0188200-01 | Rice | golgi | 24.18 | 25.21 |
| Os08t0484200-01 | Rice | golgi | 28.26 | 25.18 |
| CDX78812 | Canola | plasma membrane | 20.11 | 25.17 |
| CDY44502 | Canola | plasma membrane | 20.11 | 25.17 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 24.46 | 25.14 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 24.18 | 25.07 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 27.45 | 25.0 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 27.17 | 24.63 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.9 | 24.63 |
| CDY03202 | Canola | plasma membrane | 18.75 | 24.56 |
| CDY05713 | Canola | extracellular | 9.78 | 24.49 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 23.64 | 24.03 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.36 | 23.95 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 26.36 | 23.89 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.09 | 23.7 |
| Zm00001d048230_P001 | Maize | golgi | 24.46 | 23.68 |
| CDY01502 | Canola | plasma membrane | 19.02 | 23.57 |
| HORVU4Hr1G057610.1 | Barley | plastid | 26.36 | 23.54 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 15.22 | 23.53 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 26.9 | 23.52 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 26.09 | 23.13 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 27.72 | 23.08 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 24.18 | 23.0 |
| TraesCS7B01G081700.1 | Wheat | golgi | 25.82 | 22.95 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 26.36 | 22.93 |
| Zm00001d018122_P001 | Maize | vacuole | 26.09 | 22.91 |
| TraesCS7D01G178000.1 | Wheat | golgi | 25.27 | 22.79 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 26.9 | 22.76 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 14.67 | 22.69 |
| CDY62419 | Canola | cytosol | 9.24 | 22.67 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 26.63 | 22.43 |
| TraesCS7A01G176700.1 | Wheat | golgi | 25.27 | 22.41 |
| CDY05145 | Canola | plasma membrane | 17.93 | 22.22 |
| TraesCS4D01G200100.1 | Wheat | plastid | 25.0 | 22.22 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 18.21 | 22.11 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 17.93 | 21.93 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 22.28 | 21.41 |
| TraesCS4B01G199100.1 | Wheat | plastid | 25.0 | 20.58 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 21.47 | 20.41 |
| CDY50446 | Canola | mitochondrion | 13.04 | 20.08 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 26.9 | 18.17 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 19.84 | 17.55 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.39 | 17.25 |
| CDY13888 | Canola | plasma membrane | 16.85 | 16.76 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 15.22 | 15.86 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.3 | 15.67 |
| CDX70126 | Canola | plasma membrane | 17.12 | 15.63 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 17.66 | 15.59 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.12 | 15.44 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 17.12 | 15.4 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 17.39 | 15.35 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 16.85 | 14.76 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 16.58 | 14.7 |
| CDX90435 | Canola | nucleus | 19.02 | 11.4 |
| CDY05714 | Canola | cytosol | 4.89 | 8.45 |
| CDY31685 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX84269 | EnsemblPlantsGene:GSBRNA2T00141350001 | Gene3D:3.30.40.10 | GO:A0A078D7B5 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX84269 | ProteinID:CDX84269.1 | SEG:seg | SignalP:SignalP-TM | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI0004EB50BF | MapMan:19.2.2.1.5.3.3 | : | : | : |
Description
BnaC04g10310D
Coordinates
chrLK031836:+:1298137..1299465
Molecular Weight (calculated)
40266.8 Da
IEP (calculated)
8.813
GRAVY (calculated)
-0.195
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIIYNRWIP RSASLLLVFL LLHSVPYGSG QPTPPVPQTR ASDPVVIVIT VLFFVIFSMV FGSIFCRRSS VYSRPSVFGL TDADAAVGVV RIRRSAARGL
101: EPEVIESFPT FIYSDVKAVR IGKGGVECAV CLCEFEDEET LRLMPPCCHV FHADCVDVWL SERSTCPLCR ADLVQKQGDG GSDLSSDPGT VSSGSDPERG
201: GLEASDRHLL DGVTWTNSNN ITPRSKSTGL ASWSITGLLF PRSHSTGHSL VQPVGDLDRF TLRLPDDVHR QLMKTRTIRN VTLPQARSSR SGYRSGSVGS
301: GTGGVFSYGR KNHNHNRRLH SLSFSFSFRS GSVRSTFGGD TVAPPKNFPA ANESGERSFE RLRPDERV
101: EPEVIESFPT FIYSDVKAVR IGKGGVECAV CLCEFEDEET LRLMPPCCHV FHADCVDVWL SERSTCPLCR ADLVQKQGDG GSDLSSDPGT VSSGSDPERG
201: GLEASDRHLL DGVTWTNSNN ITPRSKSTGL ASWSITGLLF PRSHSTGHSL VQPVGDLDRF TLRLPDDVHR QLMKTRTIRN VTLPQARSSR SGYRSGSVGS
301: GTGGVFSYGR KNHNHNRRLH SLSFSFSFRS GSVRSTFGGD TVAPPKNFPA ANESGERSFE RLRPDERV
001: MAILDTKSSR WIPHNLLFLL LLLLLQSVPY GFGQTQTTPP GTTKTKPNDP VVVVITVLFL VIFFMVFGSI FCRRSNAQFS RSSIFRSTDA DAESQVVRIR
101: RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
201: GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
301: RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF SGDAPKNLPT SIEAGERSFE RLRPDERV
101: RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
201: GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
301: RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF SGDAPKNLPT SIEAGERSFE RLRPDERV
Arabidopsis Description
ATL9E3 ubiquitin-protein ligase ATL9 [Source:UniProtKB/Swiss-Prot;Acc:O64763]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.