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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, extracellular, nucleus

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • extracellular 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, nucleus
Any Predictor:extracellular, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 87.79 76.44
CDY05145 Canola plasma membrane 59.41 60.61
CDY27787 Canola extracellular, plasma membrane, vacuole 60.07 60.47
AT3G05200.1 Thale cress plasma membrane 71.95 54.77
CDY18787 Canola plasma membrane 66.67 52.2
CDY53236 Canola plasma membrane 55.45 48.41
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 50.16 43.43
CDX99986 Canola plasma membrane 49.51 42.98
CDY25038 Canola plasma membrane 52.15 42.7
CDY05577 Canola plasma membrane 52.81 41.88
CDX86163 Canola plasma membrane 33.0 33.33
CDX80653 Canola plasma membrane 32.01 32.01
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 31.35 31.25
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 28.05 25.3
KRH33975 Soybean golgi, plasma membrane, vacuole 29.7 25.07
KRH68588 Soybean plasma membrane 29.04 24.04
KRG96857 Soybean vacuole 29.37 23.73
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 24.42 21.45
TraesCS3B01G549900.1 Wheat vacuole 22.11 21.27
Zm00001d005936_P001 Maize plasma membrane 27.39 21.12
CDX90377 Canola extracellular, golgi 21.45 21.1
CDY39477 Canola extracellular 21.45 20.97
GSMUA_AchrUn_... Banana golgi, plasma membrane 24.09 20.68
Os09t0468300-00 Rice golgi, plasma membrane 26.4 20.67
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 26.73 20.66
GSMUA_Achr6P30500_001 Banana plasma membrane 19.8 20.55
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 28.38 20.48
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 20.46 20.33
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 23.76 20.11
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 25.74 20.1
TraesCS5B01G245800.1 Wheat plasma membrane 26.07 19.95
TraesCS5A01G248100.1 Wheat plasma membrane 26.07 19.9
Zm00001d020789_P001 Maize plasma membrane 26.07 19.85
HORVU5Hr1G069980.1 Barley plasma membrane 25.08 19.79
EER99041 Sorghum endoplasmic reticulum, plasma membrane 26.4 19.42
HORVU4Hr1G080840.1 Barley cytosol 15.18 19.41
GSMUA_Achr3P20400_001 Banana mitochondrion 21.78 19.19
CDY31657 Canola extracellular, plasma membrane, plastid 22.77 18.75
GSMUA_Achr10P... Banana plasma membrane 23.76 18.56
CDX84270 Canola cytosol, plastid, vacuole 19.14 18.53
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 19.14 18.53
TraesCS3D01G495500.1 Wheat vacuole 23.43 18.39
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 24.42 18.32
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 22.11 18.21
TraesCS6D01G113000.1 Wheat golgi 24.09 18.2
CDY05049 Canola plasma membrane 17.16 17.81
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 23.76 17.73
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 22.77 17.08
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 23.43 16.86
CDX90713 Canola extracellular, golgi, plasma membrane 18.81 16.81
Os08t0484200-01 Rice golgi 22.77 16.71
Zm00001d031261_P001 Maize golgi 20.46 16.45
CDX82176 Canola extracellular 19.8 16.44
GSMUA_AchrUn_... Banana plastid 19.47 16.39
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 22.44 16.39
EES18560 Sorghum golgi, plasma membrane 21.12 16.29
Zm00001d018122_P001 Maize vacuole 22.44 16.23
TraesCS7D01G178000.1 Wheat golgi 21.78 16.18
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 23.1 16.02
TraesCS7B01G081700.1 Wheat golgi 21.78 15.94
CDY70284 Canola plasma membrane 20.46 15.94
TraesCS7A01G176700.1 Wheat golgi 21.78 15.9
CDY50446 Canola mitochondrion 12.54 15.9
CDY03651 Canola plasma membrane 21.12 15.88
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 21.12 15.8
HORVU4Hr1G078260.1 Barley plasma membrane 18.48 15.69
OQU85775 Sorghum golgi, plasma membrane, vacuole 21.78 15.6
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 20.46 15.42
CDY03652 Canola plasma membrane 20.13 15.4
CDX82179 Canola plasma membrane 17.82 15.38
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 20.46 15.31
CDY12022 Canola plasma membrane 17.82 15.3
TraesCS4D01G302600.1 Wheat plasma membrane 17.82 15.21
HORVU6Hr1G077610.1 Barley plasma membrane 20.13 15.02
CDY03202 Canola plasma membrane 13.86 14.95
CDY35174 Canola plasma membrane 13.86 14.95
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 21.78 14.93
TraesCS4B01G304400.1 Wheat plasma membrane 17.49 14.93
CDY03116 Canola plasma membrane 17.16 14.73
Os03t0188200-01 Rice golgi 17.16 14.73
TraesCS4A01G404600.1 Wheat plasma membrane 17.16 14.65
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 13.86 14.63
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 13.86 14.63
CDY62007 Canola golgi, plasma membrane 17.82 14.36
CDY31686 Canola nucleus 4.95 14.29
EER92732 Sorghum golgi 17.16 14.13
CDY12527 Canola extracellular, plasma membrane, vacuole 10.89 13.87
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 10.89 13.87
CDY21367 Canola golgi, plasma membrane 17.16 13.83
Zm00001d029395_P001 Maize plasma membrane, plastid 17.16 13.58
TraesCS4A01G104900.1 Wheat mitochondrion 17.16 13.44
HORVU4Hr1G057610.1 Barley plastid 18.15 13.35
TraesCS4D01G200100.1 Wheat plastid 18.15 13.29
CDX78812 Canola plasma membrane 12.87 13.27
CDY44502 Canola plasma membrane 12.87 13.27
Zm00001d027983_P001 Maize plasma membrane, plastid 15.84 13.26
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 16.5 12.92
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 23.1 12.84
CDX82175 Canola extracellular 9.9 12.82
CDY62419 Canola cytosol 6.27 12.67
Zm00001d048230_P001 Maize golgi 15.84 12.63
CDY01502 Canola plasma membrane 12.21 12.46
TraesCS4B01G199100.1 Wheat plastid 17.82 12.08
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 16.5 12.02
CDX75097 Canola extracellular 5.28 11.59
CDY48058 Canola extracellular 5.28 11.59
Os03t0391100-00 Rice endoplasmic reticulum, golgi 16.5 11.49
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 7.59 10.85
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 4.62 9.86
CDY05714 Canola cytosol 6.6 9.39
CDX98867 Canola endoplasmic reticulum, golgi 9.9 8.5
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 10.23 8.36
CDX70126 Canola plasma membrane 10.89 8.19
CDY13888 Canola plasma membrane 9.9 8.11
CDY06859 Canola endoplasmic reticulum, plasma membrane 10.89 7.91
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 10.56 7.84
CDY66475 Canola endoplasmic reticulum, plasma membrane 10.56 7.82
CDY35230 Canola endoplasmic reticulum, plasma membrane 10.56 7.67
CDY50930 Canola endoplasmic reticulum, plasma membrane 10.56 7.62
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 9.57 7.57
CDX92900 Canola endoplasmic reticulum, plasma membrane 10.23 7.47
CDY05713 Canola extracellular 3.3 6.8
CDX90435 Canola nucleus 12.21 6.03
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY70750EnsemblPlantsGene:GSBRNA2T00007141001ProteinID:CDY70750ProteinID:CDY70750.1SEG:segSignalP:SignalP-noTM
UniParc:UPI0004EE4D61UniProt:A0A078JWE5MapMan:35.1:::
Description
BnaA03g57320DBnaA03g57320D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JWE5]
Coordinates
chrLK043173:+:2..998
Molecular Weight (calculated)
33945.1 Da
IEP (calculated)
11.817
GRAVY (calculated)
-0.729
Length
303 amino acids
Sequence
(BLAST)
001: RDPHRSSLLH GLLLHLLPLL LRRTRRRSFT GWWWKNQRKR HRGGAWARRF RGGDVSYVCL LGGEDAEARE RGAGVCDLSE RVRRRRNAAA NLAEQVAVEP
101: DLELQEVGVD PEPVVDASVP EQSVTNEVDS RRLPGVPVDV KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRMVEN WKLNRSDSLT RGGSSRRGKP
201: IDRSRAWSDR WLFRKTPSFL WRSRDDGSIR LGATGSVRGN AVVNSTGDSV RSDRWAFLRN GSFLWRNSSV HVPRGGVNKD GEGTSVKSTG AGGSTSGSVR
301: IPV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.