Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48058 Canola extracellular 96.38 96.38
AT4G09100.1 Thale cress extracellular 69.57 72.73
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 26.09 25.35
CDY31686 Canola nucleus 15.22 20.0
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 29.71 19.34
CDX82175 Canola extracellular 30.43 17.95
CDY05713 Canola extracellular 18.84 17.69
CDX80653 Canola plasma membrane 34.06 15.51
CDX86163 Canola plasma membrane 33.33 15.33
CDY53236 Canola plasma membrane 37.68 14.99
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 32.61 14.75
CDY05049 Canola plasma membrane 31.16 14.73
CDX84270 Canola cytosol, plastid, vacuole 33.33 14.7
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 31.88 14.47
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 29.71 14.29
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 29.71 14.29
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 31.88 14.06
GSMUA_Achr6P30500_001 Banana plasma membrane 29.71 14.04
CDY62419 Canola cytosol 15.22 14.0
CDX90377 Canola extracellular, golgi 31.16 13.96
GSMUA_AchrUn_... Banana plastid 36.23 13.89
GSMUA_AchrUn_... Banana golgi, plasma membrane 35.51 13.88
CDY39477 Canola extracellular 31.16 13.87
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 36.96 13.86
CDY31657 Canola extracellular, plasma membrane, plastid 36.96 13.86
CDY01502 Canola plasma membrane 29.71 13.8
CDY18787 Canola plasma membrane 38.41 13.7
GSMUA_Achr3P20400_001 Banana mitochondrion 34.06 13.66
CDX78812 Canola plasma membrane 28.99 13.61
CDY44502 Canola plasma membrane 28.99 13.61
CDY03202 Canola plasma membrane 26.81 13.17
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 32.61 13.04
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 32.61 12.86
CDY35174 Canola plasma membrane 26.09 12.81
CDY21367 Canola golgi, plasma membrane 34.78 12.77
CDX90713 Canola extracellular, golgi, plasma membrane 31.16 12.68
CDX99986 Canola plasma membrane 31.88 12.61
HORVU4Hr1G078260.1 Barley plasma membrane 32.61 12.61
CDY70284 Canola plasma membrane 35.51 12.6
CDY62007 Canola golgi, plasma membrane 34.06 12.5
EER92732 Sorghum golgi 33.33 12.5
TraesCS6D01G113000.1 Wheat golgi 36.23 12.47
Zm00001d005936_P001 Maize plasma membrane 35.51 12.47
CDY25038 Canola plasma membrane 33.33 12.43
Zm00001d027983_P001 Maize plasma membrane, plastid 32.61 12.43
TraesCS4A01G104900.1 Wheat mitochondrion 34.78 12.4
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 36.23 12.32
CDX82179 Canola plasma membrane 31.16 12.25
CDY12022 Canola plasma membrane 31.16 12.18
Os03t0188200-01 Rice golgi 31.16 12.18
CDY03651 Canola plasma membrane 35.51 12.16
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 35.51 12.13
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 35.51 12.13
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 34.06 12.11
TraesCS4A01G404600.1 Wheat plasma membrane 31.16 12.11
TraesCS4B01G304400.1 Wheat plasma membrane 31.16 12.11
Zm00001d048230_P001 Maize golgi 33.33 12.11
CDY05577 Canola plasma membrane 33.33 12.04
Zm00001d029395_P001 Maize plasma membrane, plastid 33.33 12.01
EES18560 Sorghum golgi, plasma membrane 34.06 11.96
TraesCS3D01G495500.1 Wheat vacuole 33.33 11.92
CDY03116 Canola plasma membrane 30.43 11.9
EER99041 Sorghum endoplasmic reticulum, plasma membrane 35.51 11.89
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 33.33 11.89
TraesCS4D01G302600.1 Wheat plasma membrane 30.43 11.83
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 33.33 11.73
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 30.43 11.73
Zm00001d031261_P001 Maize golgi 31.88 11.67
HORVU4Hr1G057610.1 Barley plastid 34.78 11.65
Os09t0468300-00 Rice golgi, plasma membrane 32.61 11.63
Zm00001d020789_P001 Maize plasma membrane 33.33 11.56
HORVU5Hr1G069980.1 Barley plasma membrane 31.88 11.46
Os08t0484200-01 Rice golgi 34.06 11.38
TraesCS5B01G245800.1 Wheat plasma membrane 32.61 11.36
TraesCS4D01G200100.1 Wheat plastid 34.06 11.35
GSMUA_Achr10P... Banana plasma membrane 31.88 11.34
TraesCS5A01G248100.1 Wheat plasma membrane 32.61 11.34
Os03t0391100-00 Rice endoplasmic reticulum, golgi 35.51 11.26
CDX82176 Canola extracellular 29.71 11.23
CDX98867 Canola endoplasmic reticulum, golgi 28.26 11.05
HORVU4Hr1G080840.1 Barley cytosol 18.84 10.97
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 33.33 10.93
CDY03652 Canola plasma membrane 31.16 10.86
TraesCS7B01G081700.1 Wheat golgi 31.88 10.63
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 31.88 10.6
TraesCS7D01G178000.1 Wheat golgi 31.16 10.54
TraesCS4B01G199100.1 Wheat plastid 34.06 10.51
CDX70126 Canola plasma membrane 30.43 10.42
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 33.33 10.41
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 30.43 10.37
TraesCS7A01G176700.1 Wheat golgi 31.16 10.36
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 31.16 10.34
CDY13888 Canola plasma membrane 27.54 10.27
OQU85775 Sorghum golgi, plasma membrane, vacuole 31.16 10.17
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.71 10.12
HORVU6Hr1G077610.1 Barley plasma membrane 29.71 10.1
CDY66475 Canola endoplasmic reticulum, plasma membrane 29.71 10.02
Zm00001d018122_P001 Maize vacuole 30.43 10.02
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 26.81 9.97
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.99 9.95
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 27.54 9.92
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 31.16 9.84
CDY06859 Canola endoplasmic reticulum, plasma membrane 29.71 9.83
CDY35230 Canola endoplasmic reticulum, plasma membrane 29.71 9.83
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 28.99 9.8
CDX92900 Canola endoplasmic reticulum, plasma membrane 28.99 9.64
CDY50930 Canola endoplasmic reticulum, plasma membrane 28.26 9.29
TraesCS3B01G549900.1 Wheat vacuole 19.57 8.57
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 32.61 8.26
CDX90435 Canola nucleus 29.71 6.68
CDY12527 Canola extracellular, plasma membrane, vacuole 10.87 6.3
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 10.87 6.3
CDY70750 Canola extracellular, mitochondrion, nucleus 11.59 5.28
CDY05145 Canola plasma membrane 8.7 4.04
CDY27787 Canola extracellular, plasma membrane, vacuole 8.7 3.99
CDY50446 Canola mitochondrion 4.35 2.51
CDY05714 Canola cytosol 0.72 0.47
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00220+6.3.2.-KEGG:00261+6.3.2.-KEGG:00380+6.3.2.-MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:A0A078CE52
EnsemblPlants:CDX75097ProteinID:CDX75097ProteinID:CDX75097.1GO:GO:0003674GO:GO:0005488GO:GO:0008270
EnsemblPlantsGene:GSBRNA2T00118800001InterPro:IPR001841InterPro:IPR011016InterPro:IPR013083PFAM:PF13639PFscan:PS50089
PANTHER:PTHR14155PANTHER:PTHR14155:SF263SMART:SM00184SMART:SM00744SUPFAM:SSF57850TMHMM:TMhelix
UniParc:UPI0004EB97D8InterPro:Znf_RINGInterPro:Znf_RING-CHInterPro:Znf_RING/FYVE/PHD::
Description
BnaC09g25850D
Coordinates
chrLK031803:+:69439..69855
Molecular Weight (calculated)
15444.7 Da
IEP (calculated)
5.639
GRAVY (calculated)
0.207
Length
138 amino acids
Sequence
(BLAST)
001: MSYFRKNEGT IVFTLASLAF IAFYCINYCF RRCRNRDVAL AAGDTEEAVL SPIRPPRGLD AKGVQSIPSF IYTEANGIGP GHGELVCAVC LNEYKEDEML
101: RLILPCGHVF HVDCVDIWLS YRSTCPICRA DVIVDPVY
Best Arabidopsis Sequence Match ( AT4G09100.1 )
(BLAST)
001: MSYFKRNEGT IVFAFASIGF IAFYIINYYI RRCRNRAAAA GDIEEARMSP RRPPRGLDAE AIKSFPSFVY TEARGIEPGI GELECVVCLN EFKDDETLRL
101: VPPCVHVFHA DCVDIWLSHS STCPICRAKV VP
Arabidopsis Description
ATL39RING-H2 finger protein ATL39 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.