Factsheet for Os06t0218300-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 3
nucleus 1
extracellular 3
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037192_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	66.29	69.6
TraesCS7D01G178000.1	Wheat	golgi	61.31	66.42
TraesCS7B01G081700.1	Wheat	golgi	61.99	66.18
TraesCS7A01G176700.1	Wheat	golgi	61.09	65.06
HORVU4Hr1G080840.1	Barley	cytosol	32.81	61.18
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	29.19	60.85
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	53.17	56.49
OQU76061	Sorghum	cytosol, peroxisome, plasma membrane	69.0	55.96
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	43.89	44.39
Os09t0468300-00	Rice	golgi, plasma membrane	36.65	41.86
AT4G09100.1	Thale cress	extracellular	11.99	40.15
Os08t0484200-01	Rice	golgi	35.52	38.01
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	28.51	37.5
KRH33975	Soybean	golgi, plasma membrane, vacuole	28.96	35.65
Bra010641.1-P	Field mustard	extracellular, golgi	23.98	34.42
CDX90377	Canola	extracellular, golgi	23.98	34.42
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	26.24	34.22
CDY39477	Canola	extracellular	23.98	34.19
Os02t0572200-01	Rice	plasma membrane	26.47	33.52
CDX75097	Canola	extracellular	10.41	33.33
CDX82175	Canola	extracellular	17.42	32.91
Bra038386.1-P	Field mustard	extracellular	10.18	32.61
CDY48058	Canola	extracellular	10.18	32.61
KRG96857	Soybean	vacuole	27.6	32.53
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.83	32.45
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.57	32.29
KRH72413	Soybean	cytosol, golgi, vacuole	27.15	32.09
Bra036631.1-P	Field mustard	plasma membrane	25.34	32.0
CDX99986	Canola	plasma membrane	25.11	31.81
CDY53236	Canola	plasma membrane	24.89	31.7
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	26.24	31.52
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	23.76	31.44
KRH68588	Soybean	plasma membrane	26.02	31.42
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	23.98	31.18
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	27.83	30.9
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	21.04	30.59
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.04	30.59
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	28.96	30.48
Bra009962.1-P	Field mustard	mitochondrion, plastid	19.68	30.42
CDX84270	Canola	cytosol, plastid, vacuole	21.49	30.35
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	21.27	30.03
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	21.27	30.03
CDX86163	Canola	plasma membrane	20.36	30.0
CDY18787	Canola	plasma membrane	26.24	29.97
Os03t0188200-01	Rice	golgi	23.76	29.75
CDY25038	Canola	plasma membrane	24.89	29.73
CDX80653	Canola	plasma membrane	20.36	29.7
Os10t0574400-01	Rice	mitochondrion, plasma membrane, plastid	13.35	29.65
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.79	29.53
Bra040642.1-P	Field mustard	plasma membrane	25.79	29.53
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	26.47	29.4
AT3G05200.1	Thale cress	plasma membrane	26.24	29.15
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.24	29.15
Bra020591.1-P	Field mustard	plasma membrane	25.11	29.13
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	21.27	29.1
CDY05577	Canola	plasma membrane	25.11	29.06
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	23.08	28.41
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	23.53	28.26
AT4G09120.1	Thale cress	plasma membrane	21.72	27.83
AT2G34990.2	Thale cress	plasma membrane	20.36	27.78
AT1G72200.1	Thale cress	plasma membrane	25.34	27.72
KRH72412	Soybean	nucleus, plasma membrane, plastid	24.21	27.72
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	23.08	27.72
CDY31657	Canola	extracellular, plasma membrane, plastid	23.08	27.72
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	23.53	27.51
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	26.92	27.48
CDX82176	Canola	extracellular	22.62	27.4
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	24.21	27.37
CDY70284	Canola	plasma membrane	23.76	26.99
AT1G35330.1	Thale cress	endoplasmic reticulum	19.91	26.83
CDX82179	Canola	plasma membrane	21.27	26.78
KRH16794	Soybean	plasma membrane	23.53	26.53
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	23.53	26.46
Bra028075.1-P	Field mustard	plasma membrane	21.04	26.35
CDY12022	Canola	plasma membrane	21.04	26.35
Bra008016.1-P	Field mustard	plasma membrane	23.98	26.3
CDY03651	Canola	plasma membrane	23.98	26.3
CDY03116	Canola	plasma membrane	20.81	26.06
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	19.68	25.66
CDY62007	Canola	golgi, plasma membrane	21.72	25.53
Bra008015.1-P	Field mustard	plasma membrane	22.85	25.51
CDY03652	Canola	plasma membrane	22.85	25.51
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	20.59	25.49
CDX90713	Canola	extracellular, golgi, plasma membrane	19.46	25.37
Bra040855.1-P	Field mustard	golgi, plasma membrane	21.49	25.27
CDY21367	Canola	golgi, plasma membrane	21.49	25.27
CDY05049	Canola	plasma membrane	16.52	25.0
Solyc12g087860.1.1	Tomato	vacuole	21.04	24.93
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	16.97	24.83
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	24.21	24.6
Bra012330.1-P	Field mustard	golgi, plasma membrane	19.0	24.42
AT1G22500.1	Thale cress	plasma membrane	20.81	24.15
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	19.0	24.14
PGSC0003DMT400045807	Potato	plasma membrane	20.36	23.81
Os02t0572300-00	Rice	nucleus, plastid	21.95	23.21
CDY05145	Canola	plasma membrane	14.93	22.22
CDY70750	Canola	extracellular, mitochondrion, nucleus	14.93	21.78
CDY27787	Canola	extracellular, plasma membrane, vacuole	14.48	21.26
CDY12527	Canola	extracellular, plasma membrane, vacuole	9.95	18.49
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.95	18.49
Os05t0596500-01	Rice	endoplasmic reticulum, plasma membrane	15.61	17.92
Os06t0695900-01	Rice	endoplasmic reticulum, vacuole	15.61	17.29
CDY50446	Canola	mitochondrion	8.37	15.48

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EntrezGene:4340502	ProteinID:BAD36097.1	ProteinID:BAS96809.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0043161	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os06g0218300	EnsemblPlants:Os06t0218300-01
PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF281	UniProt:Q69QB2	SMART:SM00184
SUPFAM:SSF57850	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000040399E	RefSeq:XP_015641420.1	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

Zinc finger, RING-type domain containing protein. (Os06t0218300-01)

Coordinates

chr6:-:6058841..6060541

Molecular Weight (calculated)

46966.1 Da

IEP (calculated)

6.087

GRAVY (calculated)

-0.400

Length

442 amino acids

Sequence
(BLAST)

001: MPTPRPRHRH HALPLALALA APLLLLAAAD GQPNESRDKN NGGGGGGFMA PSGGGGGMGS QSPSFSAPMV VLLVALIAAF FFIGFFSIYI RRCGGEASTG
101: PTIPAAALAA LSRQEQRSRR QRGLDPAVVE SFPTMKYAEA RELRDGGKDA VLECAVCLSE FDDDEELRLL PKCSHAFHPD CIGEWLAGHV TCPVCRCNLA
201: PDAAAAEANV VSGEVDGEQQ EEEVVVAIDV DREGEEEDEE RRREAMELER IGSQRRAVRS RSGRPLPLPR SHSTGHSLAT TRLGDAGDLE RFTLRLPEHV
301: RREMVAAAGE ESLRRTAVRE GRVGGGARSA RIGRSDRWPS FIARTFSSRI PFWSASRRVL DAAEAGADAA ATTTTTTPTS TARTKRDKTA AAADGSVSSA
401: KGSVRFDCLG GGGGGGGPSN RVVAFANDDE EDDDEKPIAR QV

Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)

001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV

Arabidopsis Description

ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.