Factsheet for Os06t0695900-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G420000.1	Wheat	plastid	85.71	85.29
TraesCSU01G093700.1	Wheat	plastid	84.96	85.18
TraesCS7B01G327800.1	Wheat	plastid	85.71	85.07
HORVU7Hr1G098470.1	Barley	plastid	84.71	84.5
Zm00001d014612_P001	Maize	peroxisome	81.7	82.12
EER90301	Sorghum	endoplasmic reticulum, golgi, vacuole	81.2	80.6
GSMUA_Achr9P13810_001	Banana	golgi, mitochondrion, plastid, vacuole	43.11	46.74
GSMUA_Achr3P05190_001	Banana	endoplasmic reticulum, golgi, plastid	44.11	45.83
CDX98867	Canola	endoplasmic reticulum, golgi	37.59	42.49
KRH62179	Soybean	plasma membrane	35.09	41.67
CDX70126	Canola	plasma membrane	40.6	40.2
Bra009136.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	39.6	39.11
AT5G05810.1	Thale cress	endoplasmic reticulum, golgi	39.85	39.07
KRH70712	Soybean	endoplasmic reticulum, extracellular, vacuole	20.05	37.56
PGSC0003DMT400078951	Potato	plasma membrane	39.6	37.44
Solyc07g007440.1.1	Tomato	plasma membrane, vacuole	39.35	37.38
VIT_11s0052g00530.t01	Wine grape	plasma membrane	42.61	37.2
Os05t0596500-01	Rice	endoplasmic reticulum, plasma membrane	28.07	29.09
Os10t0574400-01	Rice	mitochondrion, plasma membrane, plastid	11.78	23.62
Os02t0572200-01	Rice	plasma membrane	17.29	19.77
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	16.29	19.17
Os09t0468300-00	Rice	golgi, plasma membrane	18.05	18.6
Os08t0484200-01	Rice	golgi	18.05	17.43
Os03t0188200-01	Rice	golgi	15.29	17.28
Os02t0572300-00	Rice	nucleus, plastid	17.04	16.27
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	17.29	15.61
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	16.79	15.4
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	15.54	14.19

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	UniProt:A0A0P0X0S9	ProteinID:BAS99286.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161
GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os06g0695900	EnsemblPlants:Os06t0695900-01	PFAM:PF13639
PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF78	SMART:SM00184	SUPFAM:SSF57850	TMHMM:TMhelix
UniParc:UPI0003938F91	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Zinc finger, RING-type domain containing protein. (Os06t0695900-01)

Coordinates

chr6:-:29078436..29080258

Molecular Weight (calculated)

41661.5 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.201

Length

399 amino acids

Sequence
(BLAST)

001: PMEPSRRLLL SDYDGAIVSP LPSPPPSSAT PFRPGVAVVV GILTSVFSIT FLLLLYAKHC KRNAAESSGP YGSGGAFGSS GGGGAGERRN SGVDRAVVES
101: LPVFRFGALR GQKAGLECAV CLGRFEPTEA LRLLPKCRHG FHVECVDTWL DAHSTCPLCR SRVDPEDVLL LPEPPKPSTT GPPDPPETKV AAAAAAATAK
201: DKEASLAPAA PAPSPAFRGF FSGRHSTGSV RAPGRVGPAS RRSADLVGGD GGAVVGCFEA AKVRKDRVLL MEPAAAVAEP DPEAYDRRFG HRILVSTAGG
301: CEDETAPAAK QRWSEVRPSD LMFVRSEMLV TEAGRYSCSA AVHSGNGRSV ISARSLSELA GVSRLPPIRA SGEPRAGARR WPGSSWWARG PPALNGPST

Best Arabidopsis Sequence Match ( AT5G05810.1 )
(BLAST)

001: MSSSSLILLF STLSLFLNVS LADNHTAVVI TTSDTPPPLP PPSPPPRHNF TSSLMPGIAV VIAVLTAFFS LTFLLLLYVK HCKRRNGSVY VNHPQRFAIT
101: RYGGGYYNGG GVVGGRKNSG IDRSVIESLP VFRFGALSGH KDGLECAVCL ARFEPTEVLR LLPKCKHAFH VECVDTWLDA HSTCPLCRYR VDPEDILLIG
201: DCNSWFELQF SKDESNSVNN NPPGLTRFIP VSRISGRHSS AGERASRLNE IRTSSSYKSN PMSFRRSLDS SLKVNDAGEE KSESVAVNCL DRLQRKDGLL
301: LIPNRESFEG RFEHRIIISG GNRDDQRWSE VRPSDLLYLR SEMILSDCRK LAAAEGGRDV INGRSVSELT GIERRRRWGG EPRQRQATAV ISRWLAWSHR
401: ASASSIV

Arabidopsis Description

ATL43ATL43 [Source:UniProtKB/TrEMBL;Acc:A0A178ULT1]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.