Factsheet for Os10t0574400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G192600.1	Wheat	plastid	56.28	53.08
Zm00001d030038_P001	Maize	plastid	57.29	49.14
OQU92087	Sorghum	golgi, peroxisome, plastid	58.79	46.99
GSMUA_Achr4P12270_001	Banana	plastid	31.16	35.84
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plasma membrane	28.64	33.93
KRH53320	Soybean	mitochondrion	12.56	23.58
AT2G35420.1	Thale cress	plasma membrane, plastid	28.64	22.44
CDY62419	Canola	cytosol	16.08	21.33
Bra005343.1-P	Field mustard	plastid	29.65	21.15
PGSC0003DMT400001221	Potato	vacuole	19.6	20.86
Bra017320.1-P	Field mustard	extracellular, nucleus, plasma membrane	29.15	17.26
Os02t0572200-01	Rice	plasma membrane	29.65	16.91
Os09t0468300-00	Rice	golgi, plasma membrane	32.16	16.54
Solyc11g066510.1.1	Tomato	nucleus	19.6	16.53
KRH14610	Soybean	endoplasmic reticulum, nucleus, plastid	14.57	16.48
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	26.63	15.63
Os08t0484200-01	Rice	golgi	31.66	15.25
Os03t0188200-01	Rice	golgi	26.13	14.73
KRH31340	Soybean	endoplasmic reticulum, plasma membrane	16.08	14.22
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	29.65	13.56
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	29.65	13.35
Os02t0572300-00	Rice	nucleus, plastid	27.64	13.16
Os06t0695900-01	Rice	endoplasmic reticulum, vacuole	23.62	11.78
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	25.13	11.44
Os05t0596500-01	Rice	endoplasmic reticulum, plasma membrane	21.11	10.91

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	UniProt:A0A0P0XXU1	ProteinID:BAT12183.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161
GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os10g0574400	EnsemblPlants:Os10t0574400-01	PFAM:PF13639
PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF305	SMART:SM00184	SUPFAM:SSF57850	TMHMM:TMhelix
UniParc:UPI0000DD9AA6	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Zinc finger, RING-type domain containing protein. (Os10t0574400-01)

Coordinates

chr10:+:22818070..22819033

Molecular Weight (calculated)

21456.9 Da

IEP (calculated)

8.174

GRAVY (calculated)

0.144

Length

199 amino acids

Sequence
(BLAST)

001: APMAAPTRRL LLLNHEPTTT PASSSSSSRQ SFPTLLPVFI LFVLLLCFLS IFLVRDLLHF LSLCLRRRRL LLRHGEDHDS SSVSMQSSAS PINAQAPRKP
101: PGLDPAILAS FPTLRFKASA AAPECAVCLS DFAAGDALRL LTVCRHAFHT PCIDSWLRAH TTCPVCRSDL DAAPAPAPRH EDPAAVAVDV ECDRRGGAG

Best Arabidopsis Sequence Match ( AT2G35420.1 )
(BLAST)

001: MSSTTSIDSI PATAVFPSVS MPVTVVLTGV LLFVIFAGFF SLFLWQFLLN RLFTTWNLQR TPYGDLIHVA TPPENTGLDP FIIRSFPVFH YSSATKKNHG
101: TECAICLSEF SDEDTVRLIT VCRHPFHSNC IDLWFELHKT CPVCRCELDP GMIGSGRLES FHNTVTITIQ DINHDEENPP TAGSSKRLIE ASAWRFSRSH
201: STGHFMVKTT DANVKSKRRH YQTGSCVSFD ELTRYEGAGW QWLGDSSHIS RIEV

Arabidopsis Description

ATL28RING-H2 finger protein ATL28 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKR1]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.