Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G004070.1 | Barley | cytosol | 51.62 | 72.02 |
| HORVU7Hr1G096980.1 | Barley | extracellular, vacuole | 43.66 | 71.5 |
| Zm00001d003499_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 78.76 | 68.81 |
| HORVU5Hr1G086510.1 | Barley | mitochondrion | 17.7 | 68.18 |
| HORVU1Hr1G001970.1 | Barley | mitochondrion | 17.99 | 67.78 |
| KXG26428 | Sorghum | plasma membrane | 80.53 | 67.24 |
| HORVU6Hr1G051510.1 | Barley | nucleus | 15.34 | 59.77 |
| Os02t0572200-01 | Rice | plasma membrane | 51.33 | 49.86 |
| TraesCS7B01G475300.1 | Wheat | endoplasmic reticulum, plasma membrane | 27.73 | 48.96 |
| TraesCS7D01G537300.1 | Wheat | golgi, nucleus, plasma membrane | 28.02 | 44.6 |
| GSMUA_Achr8P09280_001 | Banana | cytosol | 6.19 | 43.75 |
| TraesCS7A01G551400.1 | Wheat | golgi, plastid | 31.27 | 43.44 |
| TraesCS7D01G538000.1 | Wheat | golgi | 32.45 | 42.97 |
| HORVU7Hr1G121570.1 | Barley | endoplasmic reticulum | 30.97 | 41.5 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 38.94 | 34.11 |
| Os08t0484200-01 | Rice | golgi | 38.94 | 31.96 |
| KRH38505 | Soybean | plasma membrane, vacuole | 23.3 | 27.72 |
| Os02t0572300-00 | Rice | nucleus, plastid | 33.33 | 27.03 |
| Os10t0574400-01 | Rice | mitochondrion, plasma membrane, plastid | 15.63 | 26.63 |
| Os03t0188200-01 | Rice | golgi | 27.73 | 26.63 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 34.22 | 26.24 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 32.74 | 25.4 |
| KRH13267 | Soybean | plasma membrane | 11.5 | 23.93 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 25.07 | 19.54 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 18.88 | 16.62 |
| Os06t0695900-01 | Rice | endoplasmic reticulum, vacuole | 19.17 | 16.29 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | UniProt:A0A0P0WAZ3 | ProteinID:BAS89453.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 |
| GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlantsGene:Os04g0450300 | EnsemblPlants:Os04t0450300-00 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF434 | SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000393931B | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
Similar to H0818E04.18 protein. (Os04t0450300-00)
Coordinates
chr4:+:22435662..22436681
Molecular Weight (calculated)
36059.4 Da
IEP (calculated)
8.179
GRAVY (calculated)
-0.447
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTVITVSIS VFFFLLFFCA YINQCRLAEA GDARAAAAAA AGGGAGGGPS RRGKRGLDPA VVATFPIVPY REVVKHKIGK SVLECAVCLT SFDDGDDLRL
101: LPHCSHAFHP ECIDPWLESR VTCPLCRANL EKPPPPPPPP PAAAAASPSP ERSPRCQPSP PPPPPPHALV IPVEDEEDDS DEDDRKEEAV ELEMLRSERR
201: AARLPRSHST GHSLVASAAA AAESGDHERF TLRLPQHVRD EVLRSLRLRH AASLVNLSDM SSEGSSRGGR RALGLAFGNG GGSSHGGRRW QAFLARTVSW
301: ARGGGDGSVR RGWDGSTRRG KDDAESSRKG ATSPAAGRP
101: LPHCSHAFHP ECIDPWLESR VTCPLCRANL EKPPPPPPPP PAAAAASPSP ERSPRCQPSP PPPPPPHALV IPVEDEEDDS DEDDRKEEAV ELEMLRSERR
201: AARLPRSHST GHSLVASAAA AAESGDHERF TLRLPQHVRD EVLRSLRLRH AASLVNLSDM SSEGSSRGGR RALGLAFGNG GGSSHGGRRW QAFLARTVSW
301: ARGGGDGSVR RGWDGSTRRG KDDAESSRKG ATSPAAGRP
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.