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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G537300.1 Wheat golgi, nucleus, plasma membrane 90.1 81.22
GSMUA_Achr8P09280_001 Banana cytosol 9.9 39.58
Os04t0450300-00 Rice endoplasmic reticulum, golgi 48.96 27.73
TraesCS3B01G060000.1 Wheat mitochondrion 31.25 25.75
TraesCS2B01G336300.1 Wheat extracellular, golgi, plasma membrane 50.0 25.26
Zm00001d003499_P001 Maize endoplasmic reticulum, golgi, plasma membrane 49.48 24.48
KXG26428 Sorghum plasma membrane 48.96 23.15
TraesCS2B01G529100.1 Wheat plastid 18.75 18.27
KRH13267 Soybean plasma membrane 15.1 17.79
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 35.94 17.08
TraesCS5B01G245800.1 Wheat plasma membrane 33.85 16.41
TraesCS5B01G442500.1 Wheat golgi 27.6 15.63
TraesCS3B01G499500.1 Wheat vacuole 26.56 14.7
TraesCS7B01G081700.1 Wheat golgi 30.73 14.25
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.69 14.18
TraesCS4B01G304400.1 Wheat plasma membrane 24.48 13.24
KRH38505 Soybean plasma membrane, vacuole 19.27 12.98
TraesCS3B01G549900.1 Wheat vacuole 19.79 12.06
TraesCS4B01G199100.1 Wheat plastid 24.48 10.51
TraesCS7B01G327800.1 Wheat plastid 21.35 10.2
TraesCS1B01G479700.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 20.31 9.03
Protein Annotations
EnsemblPlants:TraesCS7B01G475300.1EnsemblPlantsGene:TraesCS7B01G475300Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDncoils:CoilPANTHER:PTHR14155PANTHER:PTHR14155:SF454PFAM:PF13639PFscan:PS50089
SEG:segSMART:SM00184SUPFAM:SSF57850TIGR:cd16454TMHMM:TMhelixMapMan:19.2.2.1.5.3.3
Description
No Description!
Coordinates
chr7B:+:731243223..731244027
Molecular Weight (calculated)
21029.3 Da
IEP (calculated)
6.982
GRAVY (calculated)
-0.224
Length
192 amino acids
Sequence
(BLAST)
001: MPTATSEDNS TARSTIISVV VCIMFLLLFF GGYMNRHCRH DHGGAATGRP APEGGRASSG RGKRGLDQSV LATFPIMPWR DLHRKKRAMV EAGDERCPVC
101: LTAFVEGDSL RLLPHCSHVF HPVCIDPWLH QRATCPLCRA NLERPLPADA VAIAISAEGS DDDMHDGKEE EAMELEMLRA ERRAARLLAA GT
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.