Factsheet for TraesCS6B01G151000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G113000.1	Wheat	golgi	92.57	93.27
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	92.57	92.12
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	87.13	87.13
Os08t0484200-01	Rice	golgi	66.83	65.38
EES18560	Sorghum	golgi, plasma membrane	61.88	63.61
Zm00001d031261_P001	Maize	golgi	55.69	59.68
TraesCS5B01G245800.1	Wheat	plasma membrane	56.19	57.32
TraesCS3B01G549900.1	Wheat	vacuole	40.35	51.75
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	34.65	41.67
AT4G09100.1	Thale cress	extracellular	13.37	40.91
KRH33975	Soybean	golgi, plasma membrane, vacuole	35.4	39.83
KRG96857	Soybean	vacuole	34.41	37.07
KRH68588	Soybean	plasma membrane	33.42	36.89
CDY53236	Canola	plasma membrane	31.19	36.31
TraesCS7B01G475300.1	Wheat	endoplasmic reticulum, plasma membrane	17.08	35.94
CDY39477	Canola	extracellular	27.48	35.81
TraesCS7B01G081700.1	Wheat	golgi	36.63	35.75
CDX75097	Canola	extracellular	12.13	35.51
Bra010641.1-P	Field mustard	extracellular, golgi	26.98	35.39
CDX90377	Canola	extracellular, golgi	26.98	35.39
CDY18787	Canola	plasma membrane	33.17	34.63
Bra040642.1-P	Field mustard	plasma membrane	32.92	34.46
AT3G05200.1	Thale cress	plasma membrane	33.91	34.42
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	28.71	34.12
Bra038386.1-P	Field mustard	extracellular	11.63	34.06
CDY48058	Canola	extracellular	11.63	34.06
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	35.15	33.81
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	27.72	33.53
TraesCS6B01G346000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	33.17	33.33
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	31.19	33.25
KRH72413	Soybean	cytosol, golgi, vacuole	30.45	32.89
Bra036631.1-P	Field mustard	plasma membrane	28.47	32.86
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.47	32.86
TraesCS2B01G336300.1	Wheat	extracellular, golgi, plasma membrane	30.69	32.63
TraesCS5B01G442500.1	Wheat	golgi	27.23	32.45
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.94	32.38
CDX99986	Canola	plasma membrane	27.97	32.38
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	29.21	32.07
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	31.44	31.91
Bra009962.1-P	Field mustard	mitochondrion, plastid	22.52	31.82
CDX82175	Canola	extracellular	18.32	31.62
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	25.25	31.58
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	30.94	31.41
CDX80653	Canola	plasma membrane	23.27	31.02
CDX84270	Canola	cytosol, plastid, vacuole	23.76	30.67
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	30.2	30.65
CDY25038	Canola	plasma membrane	27.97	30.54
CDY05577	Canola	plasma membrane	28.71	30.37
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	23.51	30.35
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	23.51	30.35
CDX86163	Canola	plasma membrane	22.52	30.33
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	22.77	30.26
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.77	30.26
TraesCS3B01G499500.1	Wheat	vacuole	25.74	29.97
Bra020591.1-P	Field mustard	plasma membrane	28.22	29.92
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.24	29.53
TraesCS4B01G304400.1	Wheat	plasma membrane	25.74	29.3
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	31.19	29.1
AT4G09120.1	Thale cress	plasma membrane	24.75	28.99
AT1G35330.1	Thale cress	endoplasmic reticulum	23.51	28.96
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	26.98	28.84
TraesCS2B01G529100.1	Wheat	plastid	13.86	28.43
KRH16794	Soybean	plasma membrane	27.48	28.32
CDY70284	Canola	plasma membrane	27.23	28.28
KRH72412	Soybean	nucleus, plasma membrane, plastid	26.98	28.24
CDY31657	Canola	extracellular, plasma membrane, plastid	25.25	27.72
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	25.0	27.45
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	25.0	27.45
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	23.02	27.43
CDX82176	Canola	extracellular	24.75	27.4
CDY62007	Canola	golgi, plasma membrane	25.5	27.39
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.49	27.37
CDX82179	Canola	plasma membrane	23.76	27.35
AT2G34990.2	Thale cress	plasma membrane	21.78	27.16
CDX90713	Canola	extracellular, golgi, plasma membrane	22.77	27.14
Bra040855.1-P	Field mustard	golgi, plasma membrane	25.25	27.13
CDY21367	Canola	golgi, plasma membrane	25.25	27.13
CDY05049	Canola	plasma membrane	19.55	27.05
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	23.27	27.01
CDY12022	Canola	plasma membrane	23.51	26.91
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	20.05	26.82
Bra008016.1-P	Field mustard	plasma membrane	26.73	26.8
CDY03651	Canola	plasma membrane	26.73	26.8
Bra012330.1-P	Field mustard	golgi, plasma membrane	22.77	26.74
AT1G72200.1	Thale cress	plasma membrane	26.73	26.73
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	25.99	26.72
CDY03116	Canola	plasma membrane	23.27	26.63
TraesCS3B01G060000.1	Wheat	mitochondrion	15.35	26.61
Solyc12g087860.1.1	Tomato	vacuole	24.5	26.54
PGSC0003DMT400045807	Potato	plasma membrane	24.75	26.45
Bra028075.1-P	Field mustard	plasma membrane	23.02	26.35
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	23.27	26.33
Bra008015.1-P	Field mustard	plasma membrane	25.0	25.51
CDY03652	Canola	plasma membrane	25.0	25.51
AT1G22500.1	Thale cress	plasma membrane	24.01	25.46
TraesCS4B01G199100.1	Wheat	plastid	27.97	25.28
CDY27787	Canola	extracellular, plasma membrane, vacuole	18.56	24.92
CDY05145	Canola	plasma membrane	18.32	24.92
CDY70750	Canola	extracellular, mitochondrion, nucleus	18.32	24.42
CDY12527	Canola	extracellular, plasma membrane, vacuole	10.89	18.49
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.89	18.49
TraesCS7B01G327800.1	Wheat	plastid	17.57	17.66
CDY50446	Canola	mitochondrion	10.4	17.57
TraesCS1B01G479700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	17.82	16.67

Protein Annotations

EnsemblPlants:TraesCS6B01G151000.1	EnsemblPlantsGene:TraesCS6B01G151000	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF322	PFAM:PF13639	PFscan:PS50089	SEG:seg
SignalP:SignalP-TM	SMART:SM00184	SMART:SM01197	SUPFAM:SSF57850	TIGR:cd16454	TMHMM:TMhelix
MapMan:19.2.2.1.5.3.3	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:152107839..152109053

Molecular Weight (calculated)

42375.3 Da

IEP (calculated)

8.337

GRAVY (calculated)

-0.175

Length

404 amino acids

Sequence
(BLAST)

001: MNTTRGHRNG GSSFLLVIML VAAAADIAAA QQTGQGPSYF NPQNFNPSMA VIIVVLVTAF FFLGFFSIYI RRCAGGPLGG PGEDLSVPGA RPGGLTFLTA
101: ARSRRMRGLD PAALEALPTM AYADVKEHKV GKGELECAVC LSEFDDDDTL RLLPKCSHAF HADCIDAWLA SHVTCPVCRA NLVPGADAPA ASGAAASAMP
201: EPDILAATSV PQPAQETTTA PPEQVTVVIT DAAEETEEER VRREEAAELV RIGSVKRALR SKSGRSPAAQ FPRSHTTGHS LAAAPAESAE RYTLRLPEHV
301: LREVVAAGKL RRTKSLQAFR EDRAGGSTRR GSRSVRLGQS GRWPAITMSS FLGLSFSAWG SSRRGEADAA GKGGARGAGD GTAGAEQQQC DGGACPLPLG
401: GRRV

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.