Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G72200.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT1G72200.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 82.34 | 80.88 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 58.38 | 51.45 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 56.89 | 50.8 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 38.02 | 37.8 |
| CDX82175 | Canola | extracellular | 25.75 | 36.75 |
| VIT_18s0001g06670.t01 | Wine grape | extracellular, plasma membrane, vacuole | 43.11 | 36.18 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 38.62 | 35.93 |
| KRH68588 | Soybean | plasma membrane | 37.43 | 34.15 |
| KRG96857 | Soybean | vacuole | 38.32 | 34.13 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 39.22 | 33.94 |
| Bra003887.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 36.23 | 33.7 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 35.93 | 33.52 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 33.83 | 32.75 |
| Bra040855.1-P | Field mustard | golgi, plasma membrane | 36.83 | 32.71 |
| CDY21367 | Canola | golgi, plasma membrane | 36.83 | 32.71 |
| Solyc12g087860.1.1 | Tomato | vacuole | 36.53 | 32.71 |
| AT1G72200.1 | Thale cress | plasma membrane | 39.52 | 32.67 |
| KRH16794 | Soybean | plasma membrane | 38.32 | 32.65 |
| Bra008016.1-P | Field mustard | plasma membrane | 38.92 | 32.26 |
| CDY03651 | Canola | plasma membrane | 38.92 | 32.26 |
| CDY62007 | Canola | golgi, plasma membrane | 36.23 | 32.18 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 29.34 | 32.13 |
| PGSC0003DMT400045807 | Potato | plasma membrane | 36.23 | 32.01 |
| PGSC0003DMT400005472 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 37.43 | 31.97 |
| CDX82179 | Canola | plasma membrane | 33.53 | 31.91 |
| CDX82176 | Canola | extracellular | 34.73 | 31.78 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 37.13 | 31.63 |
| CDY70284 | Canola | plasma membrane | 36.83 | 31.62 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 27.54 | 31.51 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 36.23 | 31.27 |
| AT1G22500.1 | Thale cress | plasma membrane | 35.63 | 31.23 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 19.76 | 31.13 |
| Bra008015.1-P | Field mustard | plasma membrane | 36.83 | 31.06 |
| CDY03652 | Canola | plasma membrane | 36.83 | 31.06 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 36.83 | 30.98 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 31.74 | 30.81 |
| Zm00001d005936_P001 | Maize | plasma membrane | 36.23 | 30.79 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 35.33 | 30.73 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 36.23 | 30.56 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 35.33 | 30.41 |
| Bra012330.1-P | Field mustard | golgi, plasma membrane | 31.14 | 30.23 |
| KRH53320 | Soybean | mitochondrion | 9.58 | 30.19 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 31.74 | 30.03 |
| Solyc04g074820.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 35.33 | 30.03 |
| GSMUA_Achr10P... | Banana | plasma membrane | 34.73 | 29.9 |
| Zm00001d020789_P001 | Maize | plasma membrane | 35.03 | 29.4 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 35.93 | 29.13 |
| GSMUA_AchrUn_... | Banana | plastid | 31.14 | 28.89 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 32.93 | 28.5 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 23.95 | 27.78 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 33.53 | 27.72 |
| TraesCS6D01G113000.1 | Wheat | golgi | 32.93 | 27.43 |
| EES18560 | Sorghum | golgi, plasma membrane | 32.04 | 27.23 |
| KRH38505 | Soybean | plasma membrane, vacuole | 22.75 | 26.67 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 32.34 | 26.6 |
| Os08t0484200-01 | Rice | golgi | 32.63 | 26.39 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 24.85 | 26.35 |
| KRH38504 | Soybean | plasma membrane | 28.44 | 26.24 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 31.74 | 26.24 |
| Zm00001d031261_P001 | Maize | golgi | 29.34 | 25.99 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 32.63 | 25.89 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 18.26 | 25.74 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.14 | 25.68 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.84 | 25.62 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.84 | 25.43 |
| KRH13267 | Soybean | plasma membrane | 12.28 | 25.15 |
| Zm00001d018122_P001 | Maize | vacuole | 31.44 | 25.06 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 30.24 | 24.88 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 26.35 | 24.79 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 26.05 | 24.51 |
| KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 25.45 | 24.5 |
| EER92732 | Sorghum | golgi | 26.95 | 24.46 |
| KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 12.87 | 24.43 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 22.46 | 24.35 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 30.84 | 24.35 |
| TraesCS7A01G176700.1 | Wheat | golgi | 30.24 | 24.34 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 30.24 | 24.34 |
| TraesCS7D01G178000.1 | Wheat | golgi | 29.64 | 24.26 |
| TraesCS7B01G081700.1 | Wheat | golgi | 29.94 | 24.15 |
| Os03t0188200-01 | Rice | golgi | 25.45 | 24.08 |
| KRH31340 | Soybean | endoplasmic reticulum, plasma membrane | 16.17 | 24.0 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 17.07 | 23.95 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 25.45 | 23.94 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 25.45 | 23.81 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 25.75 | 23.76 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 31.44 | 23.76 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.77 | 23.53 |
| Zm00001d048230_P001 | Maize | golgi | 26.05 | 22.89 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 29.64 | 22.65 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 26.05 | 22.48 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 29.04 | 22.3 |
| KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 10.48 | 22.15 |
| KRH70712 | Soybean | endoplasmic reticulum, extracellular, vacuole | 14.07 | 22.07 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 20.06 | 21.68 |
| HORVU4Hr1G057610.1 | Barley | plastid | 26.35 | 21.36 |
| TraesCS4D01G200100.1 | Wheat | plastid | 26.35 | 21.26 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 24.25 | 21.15 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 23.95 | 20.67 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 32.93 | 20.18 |
| TraesCS4B01G199100.1 | Wheat | plastid | 26.35 | 19.69 |
| KRH62061 | Soybean | plastid | 15.87 | 19.56 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 23.95 | 19.09 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 23.05 | 18.51 |
| KRH62179 | Soybean | plasma membrane | 18.26 | 18.15 |
| KRH16295 | Soybean | plasma membrane | 21.26 | 17.97 |
| KRH76331 | Soybean | endoplasmic reticulum | 22.75 | 17.84 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 20.66 | 16.83 |
Protein Annotations
| EntrezGene:100805815 | MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EMBL:ACUP02003444 | EnsemblPlantsGene:GLYMA_06G099800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | UniProt:K7KU89 | EnsemblPlants:KRH52998 |
| ProteinID:KRH52998 | ProteinID:KRH52998.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 |
| SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000233A786 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:7932954..7933958
Molecular Weight (calculated)
37891.0 Da
IEP (calculated)
7.980
GRAVY (calculated)
-0.346
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTLTHSNFH HDLLLLFYFF LLTEFPSPLT AQLPDTLTPP SPQQQEDRFA RLKFDKSMAI VLVILVAVFF VLGFLSVYTR QCAERRMRGR FDISISISRR
101: QRGLDREIIE TFPTFVYSTV KSLKLGRATL ECAVCLNEFE EVETLRFIPN CSHVFHSECI DAWLANHSTC PVCRANLFPK PDDPSFDPIQ IPDPEQPVIS
201: SPTRAETGGS NPRSPNLIDQ NPTSRSRSTG FRIAGWFPRS HSTGHSLVQP GENCERFTLH LPEEVRNQLM LSRTKSCGVG VTFTRENSER RGYRARSVGS
301: SLSPHVRGWF SVKDDVGERS SDRLFSTSTR DSEV
101: QRGLDREIIE TFPTFVYSTV KSLKLGRATL ECAVCLNEFE EVETLRFIPN CSHVFHSECI DAWLANHSTC PVCRANLFPK PDDPSFDPIQ IPDPEQPVIS
201: SPTRAETGGS NPRSPNLIDQ NPTSRSRSTG FRIAGWFPRS HSTGHSLVQP GENCERFTLH LPEEVRNQLM LSRTKSCGVG VTFTRENSER RGYRARSVGS
301: SLSPHVRGWF SVKDDVGERS SDRLFSTSTR DSEV
001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
Arabidopsis Description
ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.