CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62061	Soybean	plastid	38.23	55.72
KRH52730	Soybean	golgi, plasma membrane, vacuole	57.22	55.12
KRH76331	Soybean	endoplasmic reticulum	43.04	39.91
KRH39345	Soybean	endoplasmic reticulum, vacuole	41.52	39.14
GSMUA_Achr6P26720_001	Banana	plasma membrane	33.92	38.18
GSMUA_Achr9P06250_001	Banana	endoplasmic reticulum, plasma membrane	33.42	35.97
GSMUA_Achr4P08120_001	Banana	plasma membrane	32.66	35.93
GSMUA_Achr9P00230_001	Banana	vacuole	32.91	35.33
KRH16846	Soybean	endoplasmic reticulum, extracellular, plasma membrane	13.92	34.81
GSMUA_Achr6P22700_001	Banana	plasma membrane	18.23	30.25
HORVU1Hr1G095220.1	Barley	golgi, plasma membrane	29.62	29.7
KRH70712	Soybean	endoplasmic reticulum, extracellular, vacuole	15.95	29.58
TraesCS1A01G444900.1	Wheat	golgi, plasma membrane	29.37	29.52
Zm00001d039216_P001	Maize	endoplasmic reticulum, extracellular, golgi	27.34	27.62
KRH53320	Soybean	mitochondrion	7.34	27.36
TraesCS1B01G479700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	29.87	27.31
Os05t0596500-01	Rice	endoplasmic reticulum, plasma membrane	26.33	27.01
TraesCS1D01G453000.1	Wheat	extracellular, plasma membrane	29.37	26.73
Zm00001d009777_P001	Maize	extracellular, golgi, plasma membrane	27.34	26.54
KRH62179	Soybean	plasma membrane	22.03	25.89
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	21.52	25.3
EES18815	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	29.11	24.31
KRH33975	Soybean	golgi, plasma membrane, vacuole	21.77	23.96
KRG96857	Soybean	vacuole	22.03	23.2
KRH14610	Soybean	endoplasmic reticulum, nucleus, plastid	10.13	22.73
KRH68588	Soybean	plasma membrane	20.51	22.13
KRH75596	Soybean	endoplasmic reticulum, plasma membrane, plastid	16.71	21.43
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	17.97	21.26
KRH13267	Soybean	plasma membrane	8.61	20.86
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	17.72	20.59
KRH72413	Soybean	cytosol, golgi, vacuole	19.49	20.59
KRH74402	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	14.68	20.14
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	19.24	20.05
KRH31340	Soybean	endoplasmic reticulum, plasma membrane	11.14	19.56
KRH72412	Soybean	nucleus, plasma membrane, plastid	18.48	18.91
KRH38505	Soybean	plasma membrane, vacuole	13.42	18.6
KRH45424	Soybean	endoplasmic reticulum, plasma membrane	14.18	18.12
KRH16794	Soybean	plasma membrane	17.47	17.6
KRH38504	Soybean	plasma membrane	15.7	17.13
KRH09080	Soybean	endoplasmic reticulum, extracellular, plasma membrane	14.68	16.71

Protein Annotations

EntrezGene:100803881	MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EMBL:ACUP02008859	EnsemblPlantsGene:GLYMA_14G146700	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0043161	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	UniProt:K7M6U3	EnsemblPlants:KRH16295
ProteinID:KRH16295	ProteinID:KRH16295.1	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF431
SMART:SM00184	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0001BA867A	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:31158301..31159681

Molecular Weight (calculated)

45609.5 Da

IEP (calculated)

9.195

GRAVY (calculated)

-0.401

Length

395 amino acids

Sequence
(BLAST)

001: MANCNIICNY PFKNHLPVFI NMMVLSFISN VQAQDSTDTD TLPADFPQPV RPSKVVVIVA LSILFTFSFL LLLYIRFRRI TPLELIQRSS HHSPNFQATT
101: RSNSRSRLSG IDRQVIEALP FFRFSSLKGS KQGLECTVCL SQFEDTEILR LLPKCKHTFH MNCIDKWLES HSSCPLCRNS IDPLDIKNFT YSISSRSLRV
201: PSNLTEDTNL EIFVHRESSS RFNMGSRFWN LGRNNKEERL LDQQVDGKHM HKFNHKIVVS DVVTRSRWSD LNSSDMLSLN SEMLLDMSSR RFSPSNEMIR
301: GDSSLPFIFN DDESSFTLLN TAEKRSMSEI ARVPRFIETC KQNRTEAGVA SSGSNEREER LRRIWLGIAQ RTVQWFVGQE RNSRELKHKN LTPNV

Best Arabidopsis Sequence Match ( AT4G28890.1 )
(BLAST)

001: MYQIFFFFLP LLHSYASAQT PPPFRNGDLV ANFEPSLAVV TGVLAIMFAL TFVLLVYAKC CHIDLRSGSG DRRRHDRRLR QGIFFNRSTA SSDRFSGLDK
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV

Arabidopsis Description

ATL42E3 ubiquitin-protein ligase ATL42 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF85]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.