Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 80.88 | 89.31 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 78.57 | 86.55 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 85.71 | 86.11 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 51.61 | 58.18 |
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 49.77 | 55.24 |
| Zm00001d009777_P001 | Maize | extracellular, golgi, plasma membrane | 50.0 | 53.32 |
| EES18815 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 56.45 | 51.8 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 33.64 | 41.6 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 32.95 | 38.96 |
| PGSC0003DMT400070587 | Potato | plastid | 30.41 | 38.37 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 28.57 | 38.27 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 31.11 | 36.68 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 30.18 | 36.49 |
| CDY05713 | Canola | extracellular | 12.21 | 36.05 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 19.35 | 35.29 |
| CDY13888 | Canola | plasma membrane | 29.26 | 34.32 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.8 | 33.69 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 30.18 | 33.59 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 28.57 | 33.51 |
| KRH76331 | Soybean | endoplasmic reticulum | 32.26 | 32.86 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 28.8 | 32.81 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 31.57 | 32.7 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.57 | 32.38 |
| Bra011068.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 30.18 | 31.41 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 29.95 | 31.18 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 29.95 | 30.95 |
| Bra024178.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 29.95 | 30.95 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 29.49 | 30.84 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 29.49 | 30.7 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.8 | 30.64 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 30.41 | 30.56 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 28.57 | 30.32 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 32.03 | 29.64 |
| Bra010349.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 28.57 | 29.52 |
| KRH16295 | Soybean | plasma membrane | 26.73 | 29.37 |
| KRH62061 | Soybean | plastid | 18.2 | 29.15 |
| CDY05714 | Canola | cytosol | 13.82 | 28.17 |
| TraesCS7D01G420000.1 | Wheat | plastid | 25.58 | 27.68 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 25.35 | 26.83 |
| TraesCS2D01G501500.1 | Wheat | plastid | 11.98 | 26.4 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 17.51 | 19.39 |
| TraesCS3D01G050600.1 | Wheat | plasma membrane | 15.44 | 19.2 |
| TraesCS5D01G446700.1 | Wheat | golgi | 14.75 | 18.93 |
| TraesCS2D01G315800.1 | Wheat | golgi | 16.13 | 18.77 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 16.59 | 18.65 |
| TraesCS6D01G113000.1 | Wheat | golgi | 16.36 | 17.71 |
| TraesCS7D01G537300.1 | Wheat | golgi, nucleus, plasma membrane | 8.53 | 17.37 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 13.82 | 16.9 |
| TraesCS3D01G452500.1 | Wheat | golgi, plasma membrane, vacuole | 13.36 | 16.76 |
| TraesCS4D01G200100.1 | Wheat | plastid | 15.9 | 16.67 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 14.98 | 16.05 |
| TraesCS7D01G538000.1 | Wheat | golgi | 9.22 | 15.62 |
| TraesCS7D01G178000.1 | Wheat | golgi | 14.52 | 15.44 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G453000.1 | EnsemblPlantsGene:TraesCS1D01G453000 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF220 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SignalP:SignalP-TM | SMART:SM00184 | SUPFAM:SSF57850 | TIGR:cd16486 | TMHMM:TMhelix | MapMan:19.2.2.1.5.3.3 |
Description
No Description!
Coordinates
chr1D:+:494140472..494142135
Molecular Weight (calculated)
46833.6 Da
IEP (calculated)
6.600
GRAVY (calculated)
-0.140
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTLLLLLL CATIAARAHA QAPARPAEEE TPPGAGVKVS FRPSVAIVVG IFTMIFSLTF LLLMYAKFCH PANTPLLPAT TASPSRPPAT TAEAAAALEE
101: AGAGVGKAVI ESLPFFRFAA LRGARQGLEC AVCLARFDDA DLLRLLPRCR HAFHLDCVDR WLHSSASCPL CRARVHPDDA DLGLKYAAAS ARFVFGAAGD
201: DATVGAAVPS SAGSGRDLLA GIFVERVPSA RFGDDDAGAA DDSCNKVELD RHRHRIVVSD SVFKSRWSDL NSADLIALDT EMLRSVSSGR FPYPYPYPDD
301: DIIFVGDEHD EEEQPRKPGR DDDDGARMSI EIEKKRLLDV EVGSGSKTGP SLGGCGGSEA VEPSSVRAAS RLVSSGVRSM SEIVRLPRVA VRATEEEERA
401: RQRWVPIARR TARWFAARSR EEDVNAADRL RLRV
101: AGAGVGKAVI ESLPFFRFAA LRGARQGLEC AVCLARFDDA DLLRLLPRCR HAFHLDCVDR WLHSSASCPL CRARVHPDDA DLGLKYAAAS ARFVFGAAGD
201: DATVGAAVPS SAGSGRDLLA GIFVERVPSA RFGDDDAGAA DDSCNKVELD RHRHRIVVSD SVFKSRWSDL NSADLIALDT EMLRSVSSGR FPYPYPYPDD
301: DIIFVGDEHD EEEQPRKPGR DDDDGARMSI EIEKKRLLDV EVGSGSKTGP SLGGCGGSEA VEPSSVRAAS RLVSSGVRSM SEIVRLPRVA VRATEEEERA
401: RQRWVPIARR TARWFAARSR EEDVNAADRL RLRV
001: MYQIFFFFLP LLHSYASAQT PPPFRNGDLV ANFEPSLAVV TGVLAIMFAL TFVLLVYAKC CHIDLRSGSG DRRRHDRRLR QGIFFNRSTA SSDRFSGLDK
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV
101: TAIESLPLFR FSALKGSKQG LDCSVCLSKF ESVEILRLLP KCRHAFHIGC IDQWLEQHAT CPLCRDRVSM EEDSSVLTNG NSFRFLNQSE IREDSSLELY
201: IEREEEEERI HREELSGSSR FSIGESFRKI LKLGNKEKTL LDEHVNDKDE KKLMHKFNHR IVVSDVVFKN RWSNVSSSDL MFLNSEMVNS ISSERFSSLD
301: HVKRGDEEDQ IGILRIKEEM EAKRMLENKL TSMTTMFSSE NGDSGSKSRS VMIEPGRRSV SDITAVPRLS ISIHGDCSGS AAETASALQN GGNETEERRR
401: RLWLPIARKT AQWFANREKR SQINTTHQHF DV
Arabidopsis Description
ATL42E3 ubiquitin-protein ligase ATL42 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF85]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.