CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 1
vacuole 4
nucleus 1
extracellular 3
endoplasmic reticulum 3
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62061	Soybean	plastid	55.12	83.39
KRH16295	Soybean	plasma membrane	55.12	57.22
GSMUA_Achr6P26720_001	Banana	plasma membrane	32.93	38.46
KRH39345	Soybean	endoplasmic reticulum, vacuole	38.29	37.47
KRH76331	Soybean	endoplasmic reticulum	38.29	36.85
GSMUA_Achr4P08120_001	Banana	plasma membrane	32.2	36.77
GSMUA_Achr9P00230_001	Banana	vacuole	31.71	35.33
GSMUA_Achr9P06250_001	Banana	endoplasmic reticulum, plasma membrane	31.22	34.88
GSMUA_Achr6P22700_001	Banana	plasma membrane	19.27	33.19
KRH16846	Soybean	endoplasmic reticulum, extracellular, plasma membrane	12.68	32.91
KRH70712	Soybean	endoplasmic reticulum, extracellular, vacuole	16.1	30.99
KRH53320	Soybean	mitochondrion	7.32	28.3
TraesCS1A01G444900.1	Wheat	golgi, plasma membrane	26.83	27.99
KRH62179	Soybean	plasma membrane	22.68	27.68
HORVU1Hr1G095220.1	Barley	golgi, plasma membrane	26.59	27.66
Os05t0596500-01	Rice	endoplasmic reticulum, plasma membrane	25.37	27.01
Zm00001d039216_P001	Maize	endoplasmic reticulum, extracellular, golgi	25.12	26.34
TraesCS1B01G479700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	27.07	25.69
TraesCS1D01G453000.1	Wheat	extracellular, plasma membrane	26.83	25.35
Zm00001d009777_P001	Maize	extracellular, golgi, plasma membrane	25.12	25.31
KRH14610	Soybean	endoplasmic reticulum, nucleus, plastid	10.49	24.43
EES18815	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	27.32	23.68
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	19.02	23.21
KRG96857	Soybean	vacuole	20.0	21.87
KRH33975	Soybean	golgi, plasma membrane, vacuole	19.02	21.73
KRH68588	Soybean	plasma membrane	19.02	21.31
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	17.32	20.88
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	16.83	20.66
KRH75596	Soybean	endoplasmic reticulum, plasma membrane, plastid	15.37	20.45
KRH13267	Soybean	plasma membrane	7.8	19.63
KRH72413	Soybean	cytosol, golgi, vacuole	17.8	19.52
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	17.8	19.26
KRH31340	Soybean	endoplasmic reticulum, plasma membrane	10.49	19.11
KRH72412	Soybean	nucleus, plasma membrane, plastid	17.56	18.65
KRH38505	Soybean	plasma membrane, vacuole	12.93	18.6
KRH16794	Soybean	plasma membrane	17.32	18.11
KRH45424	Soybean	endoplasmic reticulum, plasma membrane	13.41	17.8
KRH74402	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	12.44	17.71
KRH09080	Soybean	endoplasmic reticulum, extracellular, plasma membrane	14.15	16.71
KRH38504	Soybean	plasma membrane	14.63	16.57

Protein Annotations

EntrezGene:100816668	MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EMBL:ACUP02003429	EnsemblPlantsGene:GLYMA_06G084800	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0043161	GO:GO:0061630	UniProt:I1K9D1	InterPro:IPR001841	InterPro:IPR013083	EnsemblPlants:KRH52730
ProteinID:KRH52730	ProteinID:KRH52730.1	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF431
SMART:SM00184	SUPFAM:SSF57850	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00023C3060	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:6515571..6517480

Molecular Weight (calculated)

46771.2 Da

IEP (calculated)

8.925

GRAVY (calculated)

-0.362

Length

410 amino acids

Sequence
(BLAST)

001: MCNTLKFNPF KNRLLIMFML VLSLPFNVQS QAKDSEEQNL AELPQTVHPS KGIVIAVLST MFAITLLLLL YVKFCRTIPH ELLRQNSNLQ NFQGLTRSRS
101: RVSGIDKQVV ETLPFFKFSS LKGSKEGLEC TVCLSKFEDT ETLRLLPKCK HAFHMNCIDK WFESHSTCPL CRRRVEAGDI KNLNFSLSSR FLRVPSNLTE
201: DPNLEIFVHR EPSHGGSASI QRSYLPLDQR CRGSSRRGFW DVGKCKKQEL LLIDDSSSIG GTRKWNKPVH VMNHKIVISN VFTRSRWSDL NASDLLSLNS
301: EMLNDVCSGR FCLCPLESSD DSGNFHGISS SNEEENSFTA LNSPAEKRCM SERFTQKGKE NRIRECVTSN GASERLWKVW LPIARRTVQW FAIQERNSVE
401: LEHKTLASNV

Best Arabidopsis Sequence Match ( AT2G20030.1 )
(BLAST)

001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV

Arabidopsis Description

ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.