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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, nucleus, plasma membrane

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus, plasma membrane, plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH75596 Soybean endoplasmic reticulum, plasma membrane, plastid 49.65 46.43
KRH45424 Soybean endoplasmic reticulum, plasma membrane 46.53 43.37
AT4G17920.1 Thale cress plasma membrane 38.54 38.41
CDY01502 Canola plasma membrane 39.58 38.38
Bra013268.1-P Field mustard plasma membrane 37.85 37.07
CDX78812 Canola plasma membrane 37.85 37.07
CDY44502 Canola plasma membrane 37.85 37.07
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 35.76 35.89
Bra025008.1-P Field mustard plastid 35.42 35.54
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 35.42 35.54
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 34.38 35.23
AT5G46650.1 Thale cress plasma membrane 35.07 34.95
CDY35174 Canola plasma membrane 34.03 34.88
CDY03202 Canola plasma membrane 33.68 34.52
Solyc08g005110.1.1 Tomato plastid 31.6 33.21
Solyc08g076800.2.1 Tomato plastid 30.56 31.1
KRH53320 Soybean mitochondrion 9.38 25.47
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 27.78 23.95
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 27.08 22.94
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 26.74 22.92
KRH38505 Soybean plasma membrane, vacuole 22.22 22.46
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 29.51 22.43
KRH13267 Soybean plasma membrane 12.5 22.09
KRH72413 Soybean cytosol, golgi, vacuole 28.47 21.93
KRH33975 Soybean golgi, plasma membrane, vacuole 26.74 21.45
KRH31340 Soybean endoplasmic reticulum, plasma membrane 16.67 21.33
KRH09080 Soybean endoplasmic reticulum, extracellular, plasma membrane 25.35 21.04
KRH14610 Soybean endoplasmic reticulum, nucleus, plastid 12.85 21.02
KRG96857 Soybean vacuole 25.35 19.47
KRH68588 Soybean plasma membrane 24.65 19.4
KRH38504 Soybean plasma membrane 24.31 19.34
KRH16794 Soybean plasma membrane 25.0 18.37
Bra012630.1-P Field mustard nucleus 38.89 18.09
CDX90435 Canola nucleus 38.54 18.08
KRH72412 Soybean nucleus, plasma membrane, plastid 23.61 17.62
KRH70712 Soybean endoplasmic reticulum, extracellular, vacuole 12.5 16.9
KRH16846 Soybean endoplasmic reticulum, extracellular, plasma membrane 9.03 16.46
KRH62061 Soybean plastid 13.89 14.76
KRH16295 Soybean plasma membrane 20.14 14.68
KRH62179 Soybean plasma membrane 16.32 13.99
KRH39345 Soybean endoplasmic reticulum, vacuole 18.75 12.89
KRH76331 Soybean endoplasmic reticulum 18.75 12.68
KRH52730 Soybean golgi, plasma membrane, vacuole 17.71 12.44
Protein Annotations
EntrezGene:102667137MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10EMBL:ACUP02000021EnsemblPlantsGene:GLYMA_01G017200GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016567GO:GO:0016740GO:GO:0019538
GO:GO:0043161GO:GO:0061630UniProt:I1J4U5InterPro:IPR001841InterPro:IPR013083EnsemblPlants:KRH74402
ProteinID:KRH74402ProteinID:KRH74402.1PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF305
SMART:SM00184SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI00023BADDDInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:1642862..1643728
Molecular Weight (calculated)
32480.8 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.252
Length
288 amino acids
Sequence
(BLAST)
001: MQTTKYDVFA RLKANYSETV LPPPPPPPQI TPSTLISFTV VVAVVCFVGF SILCFFRCCF VNISSTTLVH LSPNASPFRG LDPSQLQAFP TFLYATVKDL
101: RKEKNQYSLE CAICLLEFDH DSMLRLLTVC YHVFHQECID LWLRSHKTCP VCRTDLDQSP LITNKSPEHQ NEDNIVEQEI STDHHHVCID VKEGDDSEGM
201: QEQKIEFARS HSTGHSIVMV RGEGRHADKY TLRLPENVAF KIVKGGHNYS KSCSSSKDMA RLAAPCRNCG YVQTVFQSSS SRSDIKNI
Best Arabidopsis Sequence Match ( AT4G17920.1 )
(BLAST)
001: MSTIIPSPLA PQPPQQHYVT PPLTVILTVI LLVFFFIGFF TLYFCKCFLD TMVQAWRLHH GGDTVSDNPL QQPEAPPVNP GLELRIINSF PTFPYSSVKD
101: LREEKYGLEC AICLLEFDGD HVLRLLTTCY HVFHQECIDL WFESHRTCPV CRRDLDPPPP PENTKPTVDE MIIDVIQETS DDEEDDHHRQ QTTTQIDTWP
201: SSGQTSSIKK EQNLPEKFSR SHSTGHSIVR NKPEEEDKYT LRLPEHVKIK VTRGHSQTES CVTFAELIRN RGYDHRRFGE VSGQTQSKN
Arabidopsis Description
ATL29RING-H2 finger protein ATL29 [Source:UniProtKB/Swiss-Prot;Acc:O49691]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.