Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G72200.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT1G72200.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 80.88 | 82.34 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 56.76 | 51.6 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 57.06 | 51.19 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 37.06 | 37.5 |
| CDX82175 | Canola | extracellular | 25.59 | 37.18 |
| VIT_18s0001g06670.t01 | Wine grape | extracellular, plasma membrane, vacuole | 42.35 | 36.18 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 37.35 | 35.38 |
| Bra003887.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 36.18 | 34.26 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 29.12 | 33.9 |
| KRH68588 | Soybean | plasma membrane | 36.47 | 33.88 |
| KRG96857 | Soybean | vacuole | 37.35 | 33.87 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 34.12 | 33.62 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 29.71 | 33.11 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 34.71 | 32.96 |
| CDX82176 | Canola | extracellular | 35.29 | 32.88 |
| Bra040855.1-P | Field mustard | golgi, plasma membrane | 36.18 | 32.71 |
| CDY21367 | Canola | golgi, plasma membrane | 36.18 | 32.71 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 37.06 | 32.64 |
| KRH16794 | Soybean | plasma membrane | 37.35 | 32.4 |
| Bra008016.1-P | Field mustard | plasma membrane | 38.24 | 32.26 |
| CDY03651 | Canola | plasma membrane | 38.24 | 32.26 |
| PGSC0003DMT400005472 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 37.06 | 32.23 |
| CDX82179 | Canola | plasma membrane | 33.24 | 32.19 |
| CDY62007 | Canola | golgi, plasma membrane | 35.59 | 32.18 |
| AT1G72200.1 | Thale cress | plasma membrane | 38.24 | 32.18 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 36.76 | 31.89 |
| CDY70284 | Canola | plasma membrane | 36.47 | 31.88 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 36.18 | 31.78 |
| Bra008015.1-P | Field mustard | plasma membrane | 36.47 | 31.31 |
| CDY03652 | Canola | plasma membrane | 36.47 | 31.31 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 36.47 | 31.23 |
| AT1G22500.1 | Thale cress | plasma membrane | 35.0 | 31.23 |
| GSMUA_Achr10P... | Banana | plasma membrane | 35.59 | 31.19 |
| KRH53320 | Soybean | mitochondrion | 9.71 | 31.13 |
| Zm00001d005936_P001 | Maize | plasma membrane | 35.88 | 31.04 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 35.0 | 30.99 |
| Solyc12g087860.1.1 | Tomato | vacuole | 33.82 | 30.83 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 35.88 | 30.81 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 19.12 | 30.66 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 31.76 | 30.59 |
| GSMUA_AchrUn_... | Banana | plastid | 32.35 | 30.56 |
| Bra012330.1-P | Field mustard | golgi, plasma membrane | 30.88 | 30.52 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 30.88 | 30.52 |
| PGSC0003DMT400045807 | Potato | plasma membrane | 33.82 | 30.42 |
| Solyc04g074820.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 34.71 | 30.03 |
| Zm00001d020789_P001 | Maize | plasma membrane | 35.0 | 29.9 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 34.12 | 29.9 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 35.59 | 29.37 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 32.65 | 28.76 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 34.12 | 28.71 |
| TraesCS6D01G113000.1 | Wheat | golgi | 33.53 | 28.43 |
| EES18560 | Sorghum | golgi, plasma membrane | 32.65 | 28.24 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 32.94 | 27.59 |
| KRH38505 | Soybean | plasma membrane, vacuole | 22.94 | 27.37 |
| Os08t0484200-01 | Rice | golgi | 33.24 | 27.36 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 25.29 | 27.3 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 32.35 | 27.23 |
| KRH74402 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 22.94 | 27.08 |
| Zm00001d031261_P001 | Maize | golgi | 29.71 | 26.79 |
| KRH38504 | Soybean | plasma membrane | 27.94 | 26.24 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 32.35 | 26.13 |
| KRH13267 | Soybean | plasma membrane | 12.35 | 25.77 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 17.94 | 25.74 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.59 | 25.68 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.29 | 25.43 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.0 | 25.37 |
| EER92732 | Sorghum | golgi | 27.35 | 25.27 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 30.0 | 25.12 |
| KRH09080 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 25.29 | 24.78 |
| KRH75596 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 22.35 | 24.68 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 30.59 | 24.59 |
| Zm00001d018122_P001 | Maize | vacuole | 30.29 | 24.58 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 30.0 | 24.58 |
| KRH14610 | Soybean | endoplasmic reticulum, nucleus, plastid | 12.65 | 24.43 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 25.29 | 24.23 |
| TraesCS7A01G176700.1 | Wheat | golgi | 29.41 | 24.1 |
| Os03t0188200-01 | Rice | golgi | 25.0 | 24.08 |
| TraesCS7D01G178000.1 | Wheat | golgi | 28.82 | 24.02 |
| KRH31340 | Soybean | endoplasmic reticulum, plasma membrane | 15.88 | 24.0 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 31.18 | 23.98 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 16.76 | 23.95 |
| TraesCS7B01G081700.1 | Wheat | golgi | 29.12 | 23.91 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 25.0 | 23.81 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 25.29 | 23.76 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 24.71 | 23.66 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 16.47 | 23.53 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 26.76 | 23.51 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 30.0 | 23.34 |
| Zm00001d048230_P001 | Maize | golgi | 25.88 | 23.16 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 24.12 | 23.1 |
| KRH45424 | Soybean | endoplasmic reticulum, plasma membrane | 20.29 | 22.33 |
| TraesCS4D01G200100.1 | Wheat | plastid | 27.06 | 22.22 |
| KRH16846 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 10.29 | 22.15 |
| HORVU4Hr1G057610.1 | Barley | plastid | 26.76 | 22.09 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 27.06 | 21.15 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 23.53 | 20.89 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 23.53 | 20.67 |
| TraesCS4B01G199100.1 | Wheat | plastid | 26.76 | 20.36 |
| KRH62061 | Soybean | plastid | 16.18 | 20.3 |
| KRH70712 | Soybean | endoplasmic reticulum, extracellular, vacuole | 12.65 | 20.19 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 32.06 | 20.0 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 24.12 | 19.57 |
| KRH76331 | Soybean | endoplasmic reticulum | 22.94 | 18.31 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 22.35 | 18.27 |
| KRH62179 | Soybean | plasma membrane | 17.65 | 17.86 |
| KRH16295 | Soybean | plasma membrane | 20.59 | 17.72 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 20.88 | 17.32 |
Protein Annotations
| EntrezGene:100815936 | MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EMBL:ACUP02002229 | EnsemblPlantsGene:GLYMA_04G098100 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0061630 | UniProt:I1JVA3 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH62285 |
| ProteinID:KRH62285 | ProteinID:KRH62285.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF263 |
| SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000233A0B3 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:8887523..8888545
Molecular Weight (calculated)
38703.1 Da
IEP (calculated)
8.724
GRAVY (calculated)
-0.336
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTFTHSIFH HDLLFLFYFF LLTEFPPQAT AQPPNTLTPP PQQDRFTRLK FDKSMAIVLL ILVVVFFILG FLSVYTRQCA ERRMGGRFDL SILISRRQRG
101: LGREVIETFP TFVYSTVKSL KIGRATLECA VCLNEFEEDE TLRFIPNCSH VFHSDCIDAW LANHSTCPVC RANLTSKPDD RCSAPIQNPD PEQPVLTSST
201: RPETVGADLL SQNRTPPRPW STGLSIASWF PRSHSTGHSL VQPGENCERF TLRLPEEVRN ELMLSRTKSC GVSVTFTREN SGRRGYRARS LGSSLSPHVT
301: RNSTSPHVRW WFSRPRSIKD DVGERSSDRL FSTTRDISEV
101: LGREVIETFP TFVYSTVKSL KIGRATLECA VCLNEFEEDE TLRFIPNCSH VFHSDCIDAW LANHSTCPVC RANLTSKPDD RCSAPIQNPD PEQPVLTSST
201: RPETVGADLL SQNRTPPRPW STGLSIASWF PRSHSTGHSL VQPGENCERF TLRLPEEVRN ELMLSRTKSC GVSVTFTREN SGRRGYRARS LGSSLSPHVT
301: RNSTSPHVRW WFSRPRSIKD DVGERSSDRL FSTTRDISEV
001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
Arabidopsis Description
ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.