Factsheet for AT1G22500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
vacuole 4
plasma membrane 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21367	Canola	golgi, plasma membrane	77.69	78.72
Bra040855.1-P	Field mustard	golgi, plasma membrane	77.69	78.72
CDY62007	Canola	golgi, plasma membrane	77.17	78.19
Bra012330.1-P	Field mustard	golgi, plasma membrane	65.62	72.67
CDY12527	Canola	extracellular, plasma membrane, vacuole	44.62	71.43
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.09	70.59
AT1G72200.1	Thale cress	plasma membrane	62.99	59.41
AT4G09100.1	Thale cress	extracellular	13.91	40.15
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	31.23	35.63
KRH72413	Soybean	cytosol, golgi, vacuole	34.38	35.03
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	31.23	35.0
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	34.38	34.56
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	34.38	32.91
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	33.33	32.48
AT4G09120.1	Thale cress	plasma membrane	28.61	31.59
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	32.55	31.55
PGSC0003DMT400045807	Potato	plasma membrane	30.71	30.95
Solyc12g087860.1.1	Tomato	vacuole	30.18	30.83
GSMUA_Achr3P06680_001	Banana	mitochondrion, plastid	31.23	30.67
GSMUA_Achr7P12810_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	24.41	30.49
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	24.15	30.46
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	29.4	29.63
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.61	29.62
GSMUA_Achr5P17910_001	Banana	golgi, plasma membrane, vacuole	26.77	29.57
AT1G35330.1	Thale cress	endoplasmic reticulum	25.2	29.27
GSMUA_Achr3P20400_001	Banana	mitochondrion	26.25	29.07
AT2G34990.2	Thale cress	plasma membrane	24.67	29.01
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	24.41	28.79
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	26.77	28.57
GSMUA_Achr9P15010_001	Banana	endoplasmic reticulum, plasma membrane	26.77	28.49
KRH72412	Soybean	nucleus, plasma membrane, plastid	28.61	28.24
TraesCS5D01G254900.1	Wheat	golgi, plasma membrane	28.87	28.06
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	25.98	28.05
AT3G05200.1	Thale cress	plasma membrane	29.13	27.89
KRH16794	Soybean	plasma membrane	28.61	27.81
Zm00001d005936_P001	Maize	plasma membrane	28.61	27.74
Os09t0468300-00	Rice	golgi, plasma membrane	28.08	27.65
HORVU5Hr1G069980.1	Barley	plasma membrane	27.82	27.6
TraesCS5A01G248100.1	Wheat	plasma membrane	28.61	27.46
GSMUA_Achr6P30500_001	Banana	plasma membrane	21.0	27.4
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	15.22	27.36
TraesCS5B01G245800.1	Wheat	plasma membrane	28.35	27.27
GSMUA_Achr10P...	Banana	plasma membrane	27.03	26.55
Zm00001d020789_P001	Maize	plasma membrane	27.56	26.38
EER99041	Sorghum	endoplasmic reticulum, plasma membrane	28.08	25.97
TraesCS3B01G549900.1	Wheat	vacuole	21.26	25.71
GSMUA_AchrUn_...	Banana	plastid	24.15	25.56
Zm00001d031261_P001	Maize	golgi	25.2	25.46
TraesCS3D01G495500.1	Wheat	vacuole	25.72	25.39
HORVU4Hr1G080840.1	Barley	cytosol	15.75	25.32
HORVU4Hr1G078260.1	Barley	plasma membrane	23.36	24.93
EES18560	Sorghum	golgi, plasma membrane	24.93	24.17
TraesCS6B01G151000.1	Wheat	extracellular, golgi, plasma membrane	25.46	24.01
TraesCS4A01G404600.1	Wheat	plasma membrane	22.31	23.94
TraesCS4D01G302600.1	Wheat	plasma membrane	22.31	23.94
TraesCS6D01G113000.1	Wheat	golgi	24.93	23.69
EER92732	Sorghum	golgi	22.83	23.64
Os08t0484200-01	Rice	golgi	25.46	23.49
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	24.93	23.4
TraesCS4B01G304400.1	Wheat	plasma membrane	21.78	23.38
Os03t0188200-01	Rice	golgi	21.52	23.23
Zm00001d027983_P001	Maize	plasma membrane, plastid	22.05	23.2
AT5G46650.1	Thale cress	plasma membrane	17.59	23.18
AT4G17920.1	Thale cress	plasma membrane	17.59	23.18
Zm00001d037192_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	25.2	22.8
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	24.15	22.77
AT2G35420.1	Thale cress	plasma membrane, plastid	14.96	22.44
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	25.72	22.43
Zm00001d052189_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	24.41	22.41
Zm00001d048230_P001	Maize	golgi	22.31	22.37
Zm00001d018122_P001	Maize	vacuole	24.41	22.2
TraesCS6B01G346000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	23.36	22.14
OQU85775	Sorghum	golgi, plasma membrane, vacuole	24.41	21.99
Zm00001d029395_P001	Maize	plasma membrane, plastid	22.05	21.93
TraesCS6A01G315600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	23.1	21.73
TraesCS6D01G294800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	23.1	21.73
HORVU6Hr1G077610.1	Barley	plasma membrane	22.83	21.43
TraesCS4A01G104900.1	Wheat	mitochondrion	21.26	20.93
TraesCS7D01G178000.1	Wheat	golgi	22.31	20.83
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	24.15	20.81
TraesCS7B01G081700.1	Wheat	golgi	22.57	20.77
TraesCS7A01G176700.1	Wheat	golgi	22.31	20.48
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	23.36	20.46
KXG39223	Sorghum	golgi, plasma membrane, plastid, vacuole	20.73	20.41
HORVU4Hr1G057610.1	Barley	plastid	22.05	20.39
TraesCS4D01G200100.1	Wheat	plastid	21.78	20.05
AT2G27940.1	Thale cress	plasma membrane	12.34	19.83
TraesCS4B01G199100.1	Wheat	plastid	21.78	18.57
OQU76061	Sorghum	cytosol, peroxisome, plasma membrane	26.25	18.35
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	19.16	17.55
AT2G20030.1	Thale cress	endoplasmic reticulum, plasma membrane	16.8	16.41
AT4G28890.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	17.59	15.51
AT5G05810.1	Thale cress	endoplasmic reticulum, golgi	16.54	15.48

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EntrezGene:838856	UniProt:A0A178WCV0	ProteinID:AAF18526.1	ProteinID:AEE30248.1
EMBL:AK226235	ArrayExpress:AT1G22500	EnsemblPlantsGene:AT1G22500	RefSeq:AT1G22500	TAIR:AT1G22500	RefSeq:AT1G22500-TAIR-G
EnsemblPlants:AT1G22500.1	TAIR:AT1G22500.1	Unigene:At.68564	EMBL:BT011235	EMBL:BT012542	EMBL:DQ059099
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005575	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009416	GO:GO:0009605	GO:GO:0009628
GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016021	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0033591	GO:GO:0043161	GO:GO:0046872	GO:GO:0061630	InterPro:IPR001841
InterPro:IPR013083	RefSeq:NP_173666.1	ProteinID:OAP16198.1	PFAM:PF13639	PO:PO:0000256	PO:PO:0000262
PO:PO:0000293	PO:PO:0007115	PO:PO:0007123	PO:PO:0009005	PO:PO:0009025	PO:PO:0009047
PO:PO:0020030	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF414	UniProt:Q9SK92	SMART:SM00184
SUPFAM:SSF57850	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00000A0B3E	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

ATL15E3 ubiquitin-protein ligase ATL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK92]

Coordinates

chr1:+:7949476..7950900

Molecular Weight (calculated)

42228.2 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.320

Length

381 amino acids

Sequence
(BLAST)

001: MVVMSRVSFY SSFLLLLLEV VVASSEFDDE GRTSFSPTTA IIMIVLVSVF FALGCISVYM RRCLQHALGM DSGGGPGNWL NVRQTTEPGL DASVIETFPT
101: FPYSTVKTLR IGKEALECPV CLNEFEDDET LRLIPQCCHV FHPGCIDAWL RSQTTCPLCR ANLVPVPGES VSSEIPGLAR ETGQNSLRTP IDDNRKRVLT
201: SPDERLIDSV AWTGNQSMPR KSMSTGWKLA ELYSPASSPG QPEENLDRYT LRLPQEIHDQ LVNSSLGKQG SKGQLALPQE RSSVRGFRTG SLGTEKNYFY
301: FERFDQDGRL DRRPFSITPP YHTRSIQSPD EIINASGNYQ DRAGAPKGLL LAIRSPFDRL FTGKKNAGER SYLQSGDASP V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.