Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- plastid 1
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 74.34 | 76.36 |
| Bra005374.1-P | Field mustard | plasma membrane, plastid, vacuole | 74.34 | 76.36 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 73.81 | 75.82 |
| AT2G34990.2 | Thale cress | plasma membrane | 46.56 | 54.32 |
| AT4G09100.1 | Thale cress | extracellular | 15.61 | 44.7 |
| AT1G35330.1 | Thale cress | endoplasmic reticulum | 37.57 | 43.29 |
| AT4G09120.1 | Thale cress | plasma membrane | 39.15 | 42.9 |
| AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 37.3 | 39.5 |
| AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 30.69 | 38.41 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 26.72 | 34.59 |
| AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 31.48 | 32.34 |
| AT1G72200.1 | Thale cress | plasma membrane | 34.39 | 32.18 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 29.37 | 32.17 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 29.1 | 31.98 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 29.63 | 31.73 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 32.28 | 31.52 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 32.54 | 31.38 |
| AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 26.72 | 31.27 |
| AT3G05200.1 | Thale cress | plasma membrane | 32.54 | 30.9 |
| Zm00001d005936_P001 | Maize | plasma membrane | 32.01 | 30.79 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 31.22 | 30.73 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 31.75 | 30.3 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 31.75 | 30.23 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 24.07 | 29.84 |
| Zm00001d020789_P001 | Maize | plasma membrane | 31.22 | 29.65 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 32.28 | 29.61 |
| AT1G22500.1 | Thale cress | plasma membrane | 29.63 | 29.4 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 16.4 | 29.25 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 29.37 | 28.76 |
| GSMUA_Achr10P... | Banana | plasma membrane | 29.37 | 28.61 |
| GSMUA_AchrUn_... | Banana | plastid | 26.98 | 28.33 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 23.55 | 28.25 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 28.31 | 27.58 |
| TraesCS6D01G113000.1 | Wheat | golgi | 29.1 | 27.43 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 17.2 | 27.43 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 29.1 | 27.23 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 29.1 | 27.09 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 28.84 | 26.98 |
| Os08t0484200-01 | Rice | golgi | 29.1 | 26.63 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 25.13 | 26.61 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 25.13 | 26.54 |
| AT4G17920.1 | Thale cress | plasma membrane | 20.11 | 26.3 |
| EES18560 | Sorghum | golgi, plasma membrane | 27.25 | 26.21 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 24.34 | 25.92 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 24.34 | 25.92 |
| Os03t0188200-01 | Rice | golgi | 24.07 | 25.78 |
| Zm00001d031261_P001 | Maize | golgi | 25.4 | 25.46 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 23.81 | 25.35 |
| AT5G46650.1 | Thale cress | plasma membrane | 19.31 | 25.26 |
| EER92732 | Sorghum | golgi | 24.34 | 25.0 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 27.51 | 24.7 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 25.13 | 24.55 |
| TraesCS7B01G081700.1 | Wheat | golgi | 26.72 | 24.4 |
| TraesCS7D01G178000.1 | Wheat | golgi | 26.19 | 24.26 |
| TraesCS7A01G176700.1 | Wheat | golgi | 26.45 | 24.1 |
| HORVU4Hr1G057610.1 | Barley | plastid | 26.19 | 24.03 |
| TraesCS4D01G200100.1 | Wheat | plastid | 26.19 | 23.91 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 25.4 | 23.88 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 22.75 | 23.76 |
| AT2G27940.1 | Thale cress | plasma membrane | 14.81 | 23.63 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 27.51 | 23.53 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.87 | 23.21 |
| Zm00001d048230_P001 | Maize | golgi | 23.28 | 23.16 |
| Zm00001d018122_P001 | Maize | vacuole | 25.66 | 23.15 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 25.4 | 23.13 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.6 | 22.96 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 25.66 | 22.93 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 23.02 | 22.72 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 24.34 | 22.66 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 26.19 | 22.65 |
| TraesCS4B01G199100.1 | Wheat | plastid | 25.66 | 21.7 |
| AT2G35420.1 | Thale cress | plasma membrane, plastid | 14.55 | 21.65 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 24.6 | 21.38 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 21.69 | 21.19 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 21.43 | 19.47 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 27.25 | 18.9 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 16.4 | 15.9 |
| AT5G05810.1 | Thale cress | endoplasmic reticulum, golgi | 16.93 | 15.72 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 17.2 | 15.05 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EntrezGene:818064 | ProteinID:AAC12839.1 | ProteinID:AEC09047.1 | EMBL:AK228813 |
| ArrayExpress:AT2G35000 | EnsemblPlantsGene:AT2G35000 | RefSeq:AT2G35000 | TAIR:AT2G35000 | RefSeq:AT2G35000-TAIR-G | EnsemblPlants:AT2G35000.1 |
| TAIR:AT2G35000.1 | Unigene:At.37726 | EMBL:BT015733 | EMBL:BT020192 | EMBL:DQ059110 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0046872 | GO:GO:0050832 | GO:GO:0061630 |
| InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_181045.1 | UniProt:O64763 | PFAM:PF13639 | PO:PO:0000084 |
| PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0020100 |
| PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI00000A8338 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
ATL9E3 ubiquitin-protein ligase ATL9 [Source:UniProtKB/Swiss-Prot;Acc:O64763]
Coordinates
chr2:-:14751541..14753319
Molecular Weight (calculated)
41882.6 Da
IEP (calculated)
7.972
GRAVY (calculated)
-0.268
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAILDTKSSR WIPHNLLFLL LLLLLQSVPY GFGQTQTTPP GTTKTKPNDP VVVVITVLFL VIFFMVFGSI FCRRSNAQFS RSSIFRSTDA DAESQVVRIR
101: RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
201: GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
301: RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF SGDAPKNLPT SIEAGERSFE RLRPDERV
101: RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
201: GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
301: RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF SGDAPKNLPT SIEAGERSFE RLRPDERV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.