Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70284 | Canola | plasma membrane | 75.99 | 78.92 |
| CDY03651 | Canola | plasma membrane | 78.22 | 78.41 |
| Bra008016.1-P | Field mustard | plasma membrane | 78.22 | 78.41 |
| Bra003887.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 68.32 | 76.88 |
| CDX82176 | Canola | extracellular | 62.62 | 69.32 |
| CDY03652 | Canola | plasma membrane | 65.59 | 66.92 |
| Bra008015.1-P | Field mustard | plasma membrane | 65.59 | 66.92 |
| CDX82179 | Canola | plasma membrane | 57.67 | 66.38 |
| CDX82175 | Canola | extracellular | 37.13 | 64.1 |
| AT1G22500.1 | Thale cress | plasma membrane | 59.41 | 62.99 |
| AT4G09100.1 | Thale cress | extracellular | 13.86 | 42.42 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 32.67 | 39.52 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 32.18 | 38.24 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 34.65 | 37.43 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 34.65 | 36.94 |
| VIT_18s0001g06670.t01 | Wine grape | extracellular, plasma membrane, vacuole | 36.14 | 36.68 |
| AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 32.18 | 34.39 |
| AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 30.45 | 33.42 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 17.08 | 32.55 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 23.27 | 32.19 |
| AT4G09120.1 | Thale cress | plasma membrane | 27.48 | 32.17 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 27.23 | 31.88 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 24.01 | 31.8 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 30.69 | 31.63 |
| AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 25.25 | 31.58 |
| Solyc04g074820.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 30.69 | 31.55 |
| PGSC0003DMT400005472 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 30.45 | 31.46 |
| Zm00001d005936_P001 | Maize | plasma membrane | 30.45 | 31.3 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 29.7 | 31.25 |
| AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 23.27 | 31.13 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 26.49 | 31.1 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 29.7 | 31.09 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 30.45 | 31.06 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 26.98 | 30.88 |
| KRH16794 | Soybean | plasma membrane | 29.95 | 30.87 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 29.46 | 30.75 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 30.2 | 30.73 |
| AT2G34990.2 | Thale cress | plasma membrane | 24.5 | 30.56 |
| AT1G35330.1 | Thale cress | endoplasmic reticulum | 24.75 | 30.49 |
| AT3G05200.1 | Thale cress | plasma membrane | 29.7 | 30.15 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 28.71 | 29.9 |
| Solyc12g087860.1.1 | Tomato | vacuole | 27.23 | 29.49 |
| Zm00001d020789_P001 | Maize | plasma membrane | 28.96 | 29.4 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 29.95 | 29.37 |
| PGSC0003DMT400045807 | Potato | plasma membrane | 27.48 | 29.37 |
| GSMUA_AchrUn_... | Banana | plastid | 25.74 | 28.89 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 27.23 | 28.5 |
| GSMUA_Achr10P... | Banana | plasma membrane | 27.23 | 28.35 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 22.03 | 28.25 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 25.0 | 28.21 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 24.75 | 28.01 |
| AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 24.26 | 27.45 |
| EER92732 | Sorghum | golgi | 25.0 | 27.45 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 24.01 | 27.32 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 24.01 | 27.32 |
| TraesCS6D01G113000.1 | Wheat | golgi | 26.98 | 27.18 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 27.23 | 27.09 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 24.26 | 27.07 |
| Zm00001d031261_P001 | Maize | golgi | 25.25 | 27.06 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 23.51 | 26.76 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 26.73 | 26.73 |
| EES18560 | Sorghum | golgi, plasma membrane | 25.99 | 26.72 |
| Os03t0188200-01 | Rice | golgi | 23.27 | 26.63 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 15.59 | 26.58 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 26.49 | 26.49 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 27.48 | 26.37 |
| Os08t0484200-01 | Rice | golgi | 26.24 | 25.67 |
| AT4G17920.1 | Thale cress | plasma membrane | 18.32 | 25.61 |
| AT5G46650.1 | Thale cress | plasma membrane | 18.32 | 25.61 |
| Zm00001d048230_P001 | Maize | golgi | 24.01 | 25.53 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 27.72 | 25.34 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 25.99 | 25.3 |
| Zm00001d018122_P001 | Maize | vacuole | 25.99 | 25.06 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 26.24 | 25.06 |
| TraesCS7D01G178000.1 | Wheat | golgi | 25.25 | 25.0 |
| TraesCS7B01G081700.1 | Wheat | golgi | 25.5 | 24.88 |
| TraesCS7A01G176700.1 | Wheat | golgi | 25.5 | 24.82 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 26.49 | 24.49 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.5 | 24.44 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.26 | 24.38 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 23.27 | 24.29 |
| AT2G27940.1 | Thale cress | plasma membrane | 14.11 | 24.05 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 22.77 | 24.02 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.01 | 23.95 |
| AT2G35420.1 | Thale cress | plasma membrane, plastid | 14.85 | 23.62 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 23.51 | 23.4 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 22.03 | 23.0 |
| HORVU4Hr1G057610.1 | Barley | plastid | 23.27 | 22.82 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 24.01 | 22.3 |
| TraesCS4D01G200100.1 | Wheat | plastid | 22.77 | 22.22 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 29.21 | 21.65 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 21.53 | 20.91 |
| TraesCS4B01G199100.1 | Wheat | plastid | 22.77 | 20.58 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 17.57 | 18.21 |
| AT5G05810.1 | Thale cress | endoplasmic reticulum, golgi | 16.34 | 16.22 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 17.33 | 16.2 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | EntrezGene:843552 | ProteinID:AAG51795.1 | ProteinID:AEE35288.1 | ArrayExpress:AT1G72200 |
| EnsemblPlantsGene:AT1G72200 | RefSeq:AT1G72200 | TAIR:AT1G72200 | RefSeq:AT1G72200-TAIR-G | EnsemblPlants:AT1G72200.1 | TAIR:AT1G72200.1 |
| Unigene:At.35131 | EMBL:BT004268 | EMBL:BT020487 | EMBL:BT026437 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0043161 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_177365.1 |
| PFAM:PF13639 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | UniProt:Q0V7Y3 | UniProt:Q84W40 |
| SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009D408 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
Coordinates
chr1:-:27169759..27171410
Molecular Weight (calculated)
44631.2 Da
IEP (calculated)
8.274
GRAVY (calculated)
-0.306
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.