Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- plasma membrane 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G72200.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT1G72200.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT1G72200.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT1G72200.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT1G72200.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008016.1-P | Field mustard | plasma membrane | 100.0 | 100.0 |
| CDY70284 | Canola | plasma membrane | 91.56 | 94.86 |
| CDY50446 | Canola | mitochondrion | 46.4 | 78.24 |
| AT1G72200.1 | Thale cress | plasma membrane | 78.41 | 78.22 |
| CDX82176 | Canola | extracellular | 69.73 | 76.99 |
| CDY03652 | Canola | plasma membrane | 73.45 | 74.75 |
| CDX82175 | Canola | extracellular | 42.18 | 72.65 |
| CDX82179 | Canola | plasma membrane | 63.28 | 72.65 |
| CDY21367 | Canola | golgi, plasma membrane | 60.79 | 65.16 |
| CDY62007 | Canola | golgi, plasma membrane | 60.55 | 64.89 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 35.24 | 59.66 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.24 | 59.66 |
| KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 32.26 | 38.92 |
| KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 32.26 | 38.24 |
| KRH72413 | Soybean | cytosol, golgi, vacuole | 35.24 | 37.97 |
| VIT_18s0001g06670.t01 | Wine grape | extracellular, plasma membrane, vacuole | 36.48 | 36.93 |
| KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 34.49 | 36.68 |
| CDX75097 | Canola | extracellular | 12.16 | 35.51 |
| CDY48058 | Canola | extracellular | 11.91 | 34.78 |
| CDY53236 | Canola | plasma membrane | 29.78 | 34.58 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.02 | 34.57 |
| CDX99986 | Canola | plasma membrane | 29.53 | 34.1 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.56 | 33.88 |
| CDX80653 | Canola | plasma membrane | 25.06 | 33.33 |
| CDX86163 | Canola | plasma membrane | 24.57 | 33.0 |
| CDY05049 | Canola | plasma membrane | 23.82 | 32.88 |
| PGSC0003DMT400005472 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 31.76 | 32.74 |
| CDY39477 | Canola | extracellular | 24.81 | 32.26 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 23.33 | 32.19 |
| CDX90377 | Canola | extracellular, golgi | 24.57 | 32.14 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 16.87 | 32.08 |
| Solyc04g074820.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 31.27 | 32.06 |
| CDY18787 | Canola | plasma membrane | 30.77 | 32.04 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 27.3 | 31.88 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 29.03 | 31.79 |
| Solyc12g087860.1.1 | Tomato | vacuole | 29.28 | 31.64 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 28.78 | 31.52 |
| PGSC0003DMT400045807 | Potato | plasma membrane | 29.53 | 31.48 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 26.3 | 31.27 |
| KRH72412 | Soybean | nucleus, plasma membrane, plastid | 29.53 | 30.83 |
| CDY05713 | Canola | extracellular | 11.17 | 30.61 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 29.78 | 30.61 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 26.8 | 30.59 |
| CDY25038 | Canola | plasma membrane | 28.04 | 30.54 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 26.05 | 30.52 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 23.08 | 30.49 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.67 | 30.28 |
| Zm00001d005936_P001 | Maize | plasma membrane | 29.53 | 30.28 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 28.78 | 30.21 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 29.03 | 30.15 |
| KRH16794 | Soybean | plasma membrane | 29.28 | 30.1 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 29.28 | 29.72 |
| CDY05577 | Canola | plasma membrane | 28.04 | 29.58 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 29.03 | 29.55 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 28.29 | 29.46 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 22.58 | 29.07 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 22.58 | 29.07 |
| GSMUA_AchrUn_... | Banana | plastid | 25.81 | 28.89 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 25.56 | 28.77 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 29.03 | 28.4 |
| Zm00001d020789_P001 | Maize | plasma membrane | 28.04 | 28.39 |
| GSMUA_Achr10P... | Banana | plasma membrane | 27.3 | 28.35 |
| CDY03116 | Canola | plasma membrane | 24.32 | 27.76 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 26.55 | 27.72 |
| CDY31686 | Canola | nucleus | 7.2 | 27.62 |
| Zm00001d031261_P001 | Maize | golgi | 25.81 | 27.59 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 21.34 | 27.3 |
| CDY12022 | Canola | plasma membrane | 23.82 | 27.2 |
| TraesCS6D01G113000.1 | Wheat | golgi | 26.8 | 26.93 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 23.82 | 26.89 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 27.05 | 26.85 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 26.8 | 26.73 |
| EER92732 | Sorghum | golgi | 24.32 | 26.63 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 27.3 | 26.51 |
| EES18560 | Sorghum | golgi, plasma membrane | 25.81 | 26.46 |
| Os08t0484200-01 | Rice | golgi | 27.05 | 26.39 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 26.3 | 26.24 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 15.38 | 26.16 |
| Zm00001d018122_P001 | Maize | vacuole | 27.05 | 26.01 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 27.3 | 26.0 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 22.83 | 25.92 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 22.83 | 25.92 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 27.05 | 25.89 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 23.08 | 25.69 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 22.58 | 25.63 |
| Os03t0188200-01 | Rice | golgi | 22.33 | 25.5 |
| CDY62419 | Canola | cytosol | 9.43 | 25.33 |
| CDY03202 | Canola | plasma membrane | 17.62 | 25.27 |
| CDY35174 | Canola | plasma membrane | 17.62 | 25.27 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 25.31 | 25.19 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 17.87 | 25.09 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 17.87 | 25.09 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.81 | 24.88 |
| CDX78812 | Canola | plasma membrane | 18.11 | 24.83 |
| CDY44502 | Canola | plasma membrane | 18.11 | 24.83 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 24.81 | 24.69 |
| TraesCS7D01G178000.1 | Wheat | golgi | 24.81 | 24.51 |
| Zm00001d048230_P001 | Maize | golgi | 23.08 | 24.47 |
| TraesCS7B01G081700.1 | Wheat | golgi | 25.06 | 24.4 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 24.57 | 24.38 |
| TraesCS7A01G176700.1 | Wheat | golgi | 25.06 | 24.34 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 26.05 | 24.03 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 26.3 | 23.98 |
| CDY01502 | Canola | plasma membrane | 17.37 | 23.57 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 22.58 | 23.51 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 22.33 | 23.5 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 22.08 | 23.0 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 24.81 | 22.99 |
| HORVU4Hr1G057610.1 | Barley | plastid | 23.33 | 22.82 |
| TraesCS4D01G200100.1 | Wheat | plastid | 22.58 | 21.98 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 15.88 | 21.12 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 28.54 | 21.1 |
| TraesCS4B01G199100.1 | Wheat | plastid | 22.83 | 20.58 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 21.09 | 20.43 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 19.85 | 19.56 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.6 | 19.36 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 14.39 | 19.27 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.62 | 19.14 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 16.63 | 18.98 |
| CDY05145 | Canola | plasma membrane | 13.9 | 18.86 |
| CDY13888 | Canola | plasma membrane | 17.12 | 18.65 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 19.11 | 18.55 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 18.86 | 18.23 |
| CDX70126 | Canola | plasma membrane | 18.11 | 18.11 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 18.86 | 18.1 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 18.61 | 17.99 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.87 | 17.75 |
| CDY31685 | Canola | cytosol | 0.74 | 13.64 |
| CDX90435 | Canola | nucleus | 17.37 | 11.4 |
| CDY05714 | Canola | cytosol | 2.98 | 5.63 |
Protein Annotations
| EnsemblPlants:CDY03651 | EnsemblPlantsGene:GSBRNA2T00116434001 | Gene3D:3.30.40.10 | GO:A0A078ER11 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY03651 | ProteinID:CDY03651.1 | SEG:seg | SignalP:SignalP-TM | SMART:SM00184 | SUPFAM:SSF57850 |
| TMHMM:TMhelix | UniParc:UPI0002546FEA | MapMan:19.2.2.1.5.3.3 | : | : | : |
Description
BnaA02g15860D
Coordinates
chrLK031945:+:193765..194976
Molecular Weight (calculated)
44298.9 Da
IEP (calculated)
8.731
GRAVY (calculated)
-0.265
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPKGRISLK RSITGHHGSI LQLHLFLLLF SGQASAQATH GGSDMYRESS RFDPTMAILM IVLVSVFFAL GFFSVYIRRC LERVMGMDNT HPADAGGNWL
101: SLSRPQARGL DASVIETFPT FRYSTVKTLR IGKEALECPV CLNEFEDAER LRLIPKCCHV FHPGCIDAWL QSHPTCPLCR ANLVPVPGEP IVSIQIPGLA
201: DEAPGSELTG DRITVLGSPD ARLIDSVALT GNQSMPRRSL STGWNLAGVF TNSDWTGQHG ENLDRFTLRL PQDIYNKLVN PSFSKGHVAL PQVMSSARGY
301: RTGSLETDTN YFYYERFDQG GRLDRRPFSM TPPYRTGSIN TSPGGSGDQV RAGTPKGLLL AMKSPFDRLF LGKNNIGERS SNNNIGERSS DHLRAGNASH
401: LTV
101: SLSRPQARGL DASVIETFPT FRYSTVKTLR IGKEALECPV CLNEFEDAER LRLIPKCCHV FHPGCIDAWL QSHPTCPLCR ANLVPVPGEP IVSIQIPGLA
201: DEAPGSELTG DRITVLGSPD ARLIDSVALT GNQSMPRRSL STGWNLAGVF TNSDWTGQHG ENLDRFTLRL PQDIYNKLVN PSFSKGHVAL PQVMSSARGY
301: RTGSLETDTN YFYYERFDQG GRLDRRPFSM TPPYRTGSIN TSPGGSGDQV RAGTPKGLLL AMKSPFDRLF LGKNNIGERS SNNNIGERSS DHLRAGNASH
401: LTV
001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
Arabidopsis Description
ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.