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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027983_P001 Maize plasma membrane, plastid 77.17 78.45
Zm00001d048230_P001 Maize golgi 79.62 77.11
Os03t0188200-01 Rice golgi 63.59 66.29
TraesCS4B01G304400.1 Wheat plasma membrane 61.96 64.23
HORVU4Hr1G078260.1 Barley plasma membrane 62.23 64.15
TraesCS4A01G404600.1 Wheat plasma membrane 60.87 63.1
TraesCS4D01G302600.1 Wheat plasma membrane 60.33 62.54
AT4G09100.1 Thale cress extracellular 13.59 37.88
CDX75097 Canola extracellular 12.5 33.33
Bra038386.1-P Field mustard extracellular 12.23 32.61
CDY48058 Canola extracellular 12.23 32.61
CDX82175 Canola extracellular 19.84 31.2
GSMUA_Achr3P20400_001 Banana mitochondrion 28.8 30.81
GSMUA_AchrUn_... Banana golgi, plasma membrane 28.8 30.03
Bra010641.1-P Field mustard extracellular, golgi 24.73 29.55
CDX90377 Canola extracellular, golgi 24.73 29.55
EES18560 Sorghum golgi, plasma membrane 31.52 29.52
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 26.36 28.87
CDY53236 Canola plasma membrane 27.17 28.82
CDY39477 Canola extracellular 24.18 28.71
EER99041 Sorghum endoplasmic reticulum, plasma membrane 31.25 27.91
KRH33975 Soybean golgi, plasma membrane, vacuole 26.9 27.58
KRG96857 Soybean vacuole 27.99 27.47
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 25.27 27.35
KRH68588 Soybean plasma membrane 27.17 27.32
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 24.46 26.95
CDY18787 Canola plasma membrane 27.72 26.36
KRH72413 Soybean cytosol, golgi, vacuole 26.63 26.2
CDY31657 Canola extracellular, plasma membrane, plastid 26.09 26.09
Bra040642.1-P Field mustard plasma membrane 27.17 25.91
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 25.82 25.82
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 22.55 25.7
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 21.2 25.66
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 21.2 25.66
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 25.0 25.63
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 26.36 25.59
Bra005375.1-P Field mustard cytosol, nucleus, plastid 21.74 25.56
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 21.74 25.56
CDX82176 Canola extracellular 25.27 25.48
CDY70284 Canola plasma membrane 26.9 25.45
CDX84270 Canola cytosol, plastid, vacuole 21.47 25.24
KXG26428 Sorghum plasma membrane 27.72 25.12
AT1G72200.1 Thale cress plasma membrane 27.45 25.0
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 25.0 25.0
Bra040855.1-P Field mustard golgi, plasma membrane 25.54 25.0
CDY21367 Canola golgi, plasma membrane 25.54 25.0
Bra012330.1-P Field mustard golgi, plasma membrane 23.1 24.71
AT3G05200.1 Thale cress plasma membrane 26.63 24.62
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 26.63 24.62
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.82 24.61
CDY62007 Canola golgi, plasma membrane 25.0 24.47
CDX80653 Canola plasma membrane 20.11 24.42
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 26.36 24.37
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 25.0 24.34
CDX86163 Canola plasma membrane 19.84 24.33
Bra008016.1-P Field mustard plasma membrane 26.63 24.32
CDY03651 Canola plasma membrane 26.63 24.32
CDX82179 Canola plasma membrane 23.1 24.22
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 24.18 24.18
EES05293 Sorghum endoplasmic reticulum, golgi, plastid 24.73 24.07
CDY25038 Canola plasma membrane 24.18 24.05
Bra009962.1-P Field mustard mitochondrion, plastid 18.48 23.78
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 25.0 23.77
CDY05577 Canola plasma membrane 24.46 23.56
AT2G34990.2 Thale cress plasma membrane 20.65 23.46
Bra036631.1-P Field mustard plasma membrane 22.28 23.43
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 22.28 23.43
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 25.27 23.37
Bra020591.1-P Field mustard plasma membrane 24.18 23.36
CDX99986 Canola plasma membrane 22.01 23.21
OQU82489 Sorghum plasma membrane, vacuole 14.95 23.21
PGSC0003DMT400073575 Potato extracellular, plasma membrane 27.17 23.09
Bra008015.1-P Field mustard plasma membrane 24.73 22.98
CDY03652 Canola plasma membrane 24.73 22.98
CDY05049 Canola plasma membrane 18.21 22.95
AT1G22500.1 Thale cress plasma membrane 23.64 22.83
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 18.48 22.52
AT4G09120.1 Thale cress plasma membrane 20.92 22.32
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 23.64 22.25
OQU85775 Sorghum golgi, plasma membrane, vacuole 25.54 22.22
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 25.27 22.14
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 23.64 22.14
OQU92087 Sorghum golgi, peroxisome, plastid 14.95 22.09
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 19.84 21.53
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 20.65 21.29
CDX90713 Canola extracellular, golgi, plasma membrane 19.57 21.24
KRH16794 Soybean plasma membrane 22.55 21.17
KRH72412 Soybean nucleus, plasma membrane, plastid 22.01 20.98
Solyc12g087860.1.1 Tomato vacuole 21.2 20.91
PGSC0003DMT400045807 Potato plasma membrane 21.47 20.9
AT1G35330.1 Thale cress endoplasmic reticulum 18.48 20.73
CDY12022 Canola plasma membrane 18.75 19.55
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 28.53 19.27
Bra028075.1-P Field mustard plasma membrane 18.21 18.98
CDY03116 Canola plasma membrane 18.21 18.98
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 17.93 18.97
EER90301 Sorghum endoplasmic reticulum, golgi, vacuole 18.75 17.16
CDY70750 Canola extracellular, mitochondrion, nucleus 14.13 17.16
CDY27787 Canola extracellular, plasma membrane, vacuole 13.04 15.95
CDY05145 Canola plasma membrane 12.77 15.82
EES18815 Sorghum endoplasmic reticulum, extracellular, plasma membrane 19.57 15.22
CDY12527 Canola extracellular, plasma membrane, vacuole 9.78 15.13
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 9.51 14.71
CDY50446 Canola mitochondrion 7.88 12.13
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10EntrezGene:8057639UniProt:C5WUU9EnsemblPlants:EER92732ProteinID:EER92732
ProteinID:EER92732.1GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005575GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0043161GO:GO:0061630InterPro:IPR001841
InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF298SMART:SM00184
EnsemblPlantsGene:SORBI_3001G476600SUPFAM:SSF57850unigene:Sbi.8907SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0001A829CF
RefSeq:XP_002465734.1InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:74929607..74931731
Molecular Weight (calculated)
39713.6 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.331
Length
368 amino acids
Sequence
(BLAST)
001: MARRRTASPL AALFLLLLST AARPSLAQPS NTTIVDHHSR TAVGGFTPTT VIVLVALISA FVILTVFSIY INRCAPTRAP PPRRSPSRYA PPDHHHAAAA
101: AGAVVHPERR ARAGLDREVV ESFPTAVYGD VKARVAAKSG PPLECAVCLA AFEDRDDLRV LPACCHVFHP DCIDPWLAGA VTCPLCRADL TVTAPYPPPA
201: SSSEGCDCDQ AAAREEQEDD EDEERDEARL VAAFTPESVI SFGAARPHEF HYRRTQSAMD VPDRHTLRLP EHVMKELAAV RRHRRAASLA GYPDGGAERT
301: PGWLASFWRS VSWQRPSRTD QDAVDEHGGS NSKRVVPITG TPAENPSGSG AAATDGKEKP DHDALNQV
Best Arabidopsis Sequence Match ( AT1G72200.1 )
(BLAST)
001: MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN
101: DAGNWLATNR QQARGLDASI IETFPTFQYS TVKTLRIGKE ALECSVCLNE FEDDETLRLI PKCCHVFHPG CIDAWLRSHT TCPLCRADLI PVPGESIVSI
201: QIPGLVNDPP GSDPNGDRIR SLGSPDARLI ESVALTCNQS MPRRSMSTGW NLAGMFTNSD RTGQHSENLD RFTLRLPQDI HNKLVNPNLS KVHVALPQVM
301: SSTRGYRTGS LGSERNYFYY ERFDQDGRLD RRPFSITPPY RTSSINHMSP GGSGGDKVRA SSPKSLLLAM RSPFDRLFLG KNNNVGENSS DHLRSCDATP
401: SNTV
Arabidopsis Description
ATL11RING-H2 finger protein ATL11 [Source:UniProtKB/Swiss-Prot;Acc:Q84W40]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.