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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 98.0 98.0
CDX99986 Canola plasma membrane 95.43 95.7
Bra020591.1-P Field mustard plasma membrane 76.86 70.6
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 55.71 64.14
Bra009962.1-P Field mustard mitochondrion, plastid 50.57 61.89
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 65.14 59.07
Bra040642.1-P Field mustard plasma membrane 63.43 57.51
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 51.43 51.72
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.86 40.48
KRH33975 Soybean golgi, plasma membrane, vacuole 41.14 40.11
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 36.29 36.81
KRG96857 Soybean vacuole 39.43 36.8
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 30.86 35.41
KRH68588 Soybean plasma membrane 36.86 35.25
Zm00001d005936_P001 Maize plasma membrane 39.14 34.86
Bra010641.1-P Field mustard extracellular, golgi 30.0 34.09
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 38.57 33.92
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 38.29 33.67
GSMUA_Achr10P... Banana plasma membrane 37.14 33.51
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 37.43 33.42
Os09t0468300-00 Rice golgi, plasma membrane 36.86 33.33
PGSC0003DMT400073575 Potato extracellular, plasma membrane 41.14 33.26
Zm00001d020789_P001 Maize plasma membrane 37.71 33.17
GSMUA_AchrUn_... Banana golgi, plasma membrane 33.43 33.14
GSMUA_Achr3P20400_001 Banana mitochondrion 32.57 33.14
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 39.71 33.1
GSMUA_Achr6P30500_001 Banana plasma membrane 27.43 32.88
HORVU5Hr1G069980.1 Barley plasma membrane 36.0 32.81
TraesCS5A01G248100.1 Wheat plasma membrane 37.14 32.75
TraesCS5B01G245800.1 Wheat plasma membrane 36.86 32.58
EER99041 Sorghum endoplasmic reticulum, plasma membrane 38.0 32.28
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 32.86 32.12
Bra038386.1-P Field mustard extracellular 12.57 31.88
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 12.86 31.69
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 34.57 31.19
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 31.14 30.36
GSMUA_AchrUn_... Banana plastid 31.14 30.28
Bra040855.1-P Field mustard golgi, plasma membrane 32.29 30.05
TraesCS3B01G549900.1 Wheat vacuole 26.86 29.84
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 28.86 29.79
Bra012330.1-P Field mustard golgi, plasma membrane 29.14 29.65
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 31.14 29.62
TraesCS3D01G495500.1 Wheat vacuole 32.57 29.53
Bra008016.1-P Field mustard plasma membrane 34.0 29.53
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 17.71 29.25
HORVU4Hr1G080840.1 Barley cytosol 19.71 29.11
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 32.86 28.47
TraesCS6D01G113000.1 Wheat golgi 32.57 28.43
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 32.57 28.08
Bra008015.1-P Field mustard plasma membrane 31.43 27.78
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 32.0 27.72
Bra028075.1-P Field mustard plasma membrane 27.71 27.48
EES18560 Sorghum golgi, plasma membrane 30.57 27.23
Bra005375.1-P Field mustard cytosol, nucleus, plastid 24.29 27.16
Os08t0484200-01 Rice golgi 32.0 27.12
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 32.57 27.08
Zm00001d018122_P001 Maize vacuole 32.29 26.97
Bra013268.1-P Field mustard plasma membrane 22.57 26.87
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 21.43 26.69
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 31.43 26.51
HORVU4Hr1G078260.1 Barley plasma membrane 26.86 26.33
Zm00001d031261_P001 Maize golgi 28.29 26.26
Bra025008.1-P Field mustard plastid 21.43 26.13
OQU85775 Sorghum golgi, plasma membrane, vacuole 31.14 25.77
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.71 25.68
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.43 25.62
TraesCS4A01G104900.1 Wheat mitochondrion 28.29 25.58
Os03t0188200-01 Rice golgi 25.71 25.5
TraesCS7B01G081700.1 Wheat golgi 30.0 25.36
TraesCS4A01G404600.1 Wheat plasma membrane 25.71 25.35
TraesCS4D01G302600.1 Wheat plasma membrane 25.71 25.35
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 32.0 25.34
TraesCS7D01G178000.1 Wheat golgi 29.43 25.25
TraesCS7A01G176700.1 Wheat golgi 29.71 25.06
TraesCS4B01G304400.1 Wheat plasma membrane 25.14 24.79
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 30.86 24.71
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.57 24.69
TraesCS4D01G200100.1 Wheat plastid 29.14 24.64
HORVU4Hr1G057610.1 Barley plastid 28.86 24.51
HORVU6Hr1G077610.1 Barley plasma membrane 28.0 24.14
Zm00001d029395_P001 Maize plasma membrane, plastid 26.0 23.76
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 26.0 23.51
Os03t0391100-00 Rice endoplasmic reticulum, golgi 28.0 22.53
EER92732 Sorghum golgi 23.43 22.28
TraesCS4B01G199100.1 Wheat plastid 28.29 22.15
Zm00001d048230_P001 Maize golgi 23.71 21.84
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 25.43 21.39
Zm00001d027983_P001 Maize plasma membrane, plastid 21.71 20.99
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 32.29 20.73
Bra005343.1-P Field mustard plastid 16.0 20.07
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 20.86 17.38
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 20.29 17.03
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 20.29 16.9
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 18.29 15.84
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 15.14 15.77
Bra012630.1-P Field mustard nucleus 21.71 12.28
Protein Annotations
EnsemblPlants:Bra036631.1EnsemblPlants:Bra036631.1-PEnsemblPlantsGene:Bra036631Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI0002541DD7UniProt:M4F6C2MapMan:19.2.2.1.5.3.3:
Description
AT5G27420 (E=7e-138) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA09:-:2085543..2086595
Molecular Weight (calculated)
38577.4 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.122
Length
350 amino acids
Sequence
(BLAST)
001: MKSLLSFQAL VLFLLLAGSE LASGQTDTRN EQYSYGTGLS PAMAVAIVVV IAILFFMGFF TVYLRRYTGA VDGSVNNPRV GARRVAHATV ARGLDASVIE
101: TFPTLVYSEV KTQKIGKGAL ECAICLNEFE DDETLCLLPK CDHVFHPHCI GAWLEGHVTC PVCRTNLAEP VEPDLVIEID IESQQSVVVP EPAVELGGSV
201: ATTRVKFSRS HTTGHSVVSP GECTERFTLR LPEDLRKKIM ASWKMNRSNS LLVLPRGGSS RSGKPVDRSR ARSDRWLFRK TQSFMWRSRD DGSIRLGGTC
301: SIRAVTSPTG DTVRADRWNF LRNPSFLWRT TPVPSPRIEV KKDGEGTSSV
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.