Factsheet for Bra009136.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70126	Canola	plasma membrane	97.77	98.01
AT5G05810.1	Thale cress	endoplasmic reticulum, golgi	81.44	80.84
KRH62179	Soybean	plasma membrane	40.84	49.11
VIT_11s0052g00530.t01	Wine grape	plasma membrane	53.96	47.7
PGSC0003DMT400078951	Potato	plasma membrane	43.56	41.71
Solyc07g007440.1.1	Tomato	plasma membrane, vacuole	42.57	40.95
Zm00001d014612_P001	Maize	peroxisome	39.85	40.55
Os06t0695900-01	Rice	endoplasmic reticulum, vacuole	39.11	39.6
KRH70712	Soybean	endoplasmic reticulum, extracellular, vacuole	20.79	39.44
GSMUA_Achr9P13810_001	Banana	golgi, mitochondrion, plastid, vacuole	35.64	39.13
EER90301	Sorghum	endoplasmic reticulum, golgi, vacuole	38.61	38.81
TraesCSU01G093700.1	Wheat	plastid	38.12	38.69
HORVU7Hr1G098470.1	Barley	plastid	38.12	38.5
TraesCS7D01G420000.1	Wheat	plastid	38.12	38.4
TraesCS7B01G327800.1	Wheat	plastid	38.12	38.31
GSMUA_Achr3P05190_001	Banana	endoplasmic reticulum, golgi, plastid	35.89	37.76
Bra038386.1-P	Field mustard	extracellular	9.65	28.26
Bra024178.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.71	27.62
Bra011068.1-P	Field mustard	endoplasmic reticulum, plasma membrane	27.97	27.1
Bra011991.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	9.41	26.76
Bra010349.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.98	25.95
Bra025008.1-P	Field mustard	plastid	15.35	21.6
Bra010641.1-P	Field mustard	extracellular, golgi	16.09	21.1
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	15.84	21.05
Bra009962.1-P	Field mustard	mitochondrion, plastid	14.85	20.98
Bra017535.1-P	Field mustard	nucleus, plasma membrane, plastid	14.11	20.28
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	14.85	19.17
Bra013268.1-P	Field mustard	plasma membrane	13.86	19.05
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	16.83	18.94
Bra040855.1-P	Field mustard	golgi, plasma membrane	17.33	18.62
Bra012330.1-P	Field mustard	golgi, plasma membrane	15.59	18.31
Bra036631.1-P	Field mustard	plasma membrane	15.84	18.29
Bra040642.1-P	Field mustard	plasma membrane	17.08	17.88
Bra020591.1-P	Field mustard	plasma membrane	16.83	17.85
Bra008016.1-P	Field mustard	plasma membrane	17.57	17.62
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	15.59	17.12
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	16.09	16.84
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	13.86	16.52
Bra028075.1-P	Field mustard	plasma membrane	14.36	16.43
Bra008015.1-P	Field mustard	plasma membrane	15.84	16.16
Bra005343.1-P	Field mustard	plastid	10.64	15.41
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	10.4	12.07
Bra017320.1-P	Field mustard	extracellular, nucleus, plasma membrane	9.9	11.9
Bra012630.1-P	Field mustard	nucleus	13.12	8.56

Protein Annotations

EnsemblPlants:Bra009136.1	EnsemblPlants:Bra009136.1-P	EnsemblPlantsGene:Bra009136	Gene3D:3.30.40.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155
PANTHER:PTHR14155:SF78	PFAM:PF13639	PFscan:PS50089	SEG:seg	SignalP:SignalP-noTM	SMART:SM00184
SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0002544C58	UniProt:M4CY39	MapMan:19.2.2.1.5.3.3	:

Description

AT5G05810 (E=7e-126) ATL43 | ATL43; protein binding / zinc ion binding

Coordinates

chrA10:+:15379204..15380418

Molecular Weight (calculated)

45023.4 Da

IEP (calculated)

9.424

GRAVY (calculated)

-0.394

Length

404 amino acids

Sequence
(BLAST)

001: MSSSSSLLLV SLLSLFLNSS LADNDRYNTT AVVIMNPTTP PPLPPPSPLQ RHNVNSSFMP RIAVVIAVLT VVFSLTCLLL LSVKHCKRRN GSVNDTQRFA
101: TSRYYGGGGS GGGGVGRKNS GIDRSVIESL PVFRFGALSG HKEGLECAVC LARFEPTEVL RLLPKCKHAF HVECVDTWLD AHSTCPLCRY RVDPEDILLI
201: SDCNSWFELR LSNNRREESN NNNNTGSTRF DFVSRISGRH SSAGERASRL NDVRKLSSFR RSLDSSLRIN DGEEEKTDSV AVAVGCFDRN QQRKDGLLLN
301: SNRESFEARF EHRIIISGGN RDQRWSEVRP ADLLYLRSEM ILSDCRKLAA AEDGREVIGG RSVSELTSID RRRRWGGEPR QRQATAVISR WLAWSHRPSA
401: SSAV

Best Arabidopsis Sequence Match ( AT5G05810.1 )
(BLAST)

001: MSSSSLILLF STLSLFLNVS LADNHTAVVI TTSDTPPPLP PPSPPPRHNF TSSLMPGIAV VIAVLTAFFS LTFLLLLYVK HCKRRNGSVY VNHPQRFAIT
101: RYGGGYYNGG GVVGGRKNSG IDRSVIESLP VFRFGALSGH KDGLECAVCL ARFEPTEVLR LLPKCKHAFH VECVDTWLDA HSTCPLCRYR VDPEDILLIG
201: DCNSWFELQF SKDESNSVNN NPPGLTRFIP VSRISGRHSS AGERASRLNE IRTSSSYKSN PMSFRRSLDS SLKVNDAGEE KSESVAVNCL DRLQRKDGLL
301: LIPNRESFEG RFEHRIIISG GNRDDQRWSE VRPSDLLYLR SEMILSDCRK LAAAEGGRDV INGRSVSELT GIERRRRWGG EPRQRQATAV ISRWLAWSHR
401: ASASSIV

Arabidopsis Description

ATL43ATL43 [Source:UniProtKB/TrEMBL;Acc:A0A178ULT1]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.