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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 5
  • mitochondrion 1
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 68.6 99.16
CDY12527 Canola extracellular, plasma membrane, vacuole 65.41 94.54
Bra040855.1-P Field mustard golgi, plasma membrane 79.07 72.34
AT1G22500.1 Thale cress plasma membrane 72.67 65.62
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 56.98 54.6
Bra008016.1-P Field mustard plasma membrane 61.92 52.85
Bra008015.1-P Field mustard plasma membrane 54.94 47.73
Bra038386.1-P Field mustard extracellular 12.5 31.16
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 36.05 31.16
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 30.23 31.14
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 30.52 30.88
KRH72413 Soybean cytosol, golgi, vacuole 32.85 30.21
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 33.14 30.08
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 26.16 29.61
Bra036631.1-P Field mustard plasma membrane 29.65 29.14
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 11.92 28.87
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 25.29 28.52
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 32.27 28.39
Bra010641.1-P Field mustard extracellular, golgi 25.29 28.25
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 28.2 28.12
GSMUA_Achr6P30500_001 Banana plasma membrane 23.84 28.08
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 31.98 27.99
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 29.65 27.72
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 27.03 27.43
Bra009962.1-P Field mustard mitochondrion, plastid 22.67 27.27
GSMUA_Achr3P20400_001 Banana mitochondrion 26.74 26.74
Bra040642.1-P Field mustard plasma membrane 29.94 26.68
KRH72412 Soybean nucleus, plasma membrane, plastid 29.94 26.68
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 29.94 26.55
KRH16794 Soybean plasma membrane 30.23 26.53
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 29.94 26.28
Bra020591.1-P Field mustard plasma membrane 28.78 25.98
PGSC0003DMT400045807 Potato plasma membrane 28.49 25.93
HORVU5Hr1G069980.1 Barley plasma membrane 28.78 25.78
Solyc12g087860.1.1 Tomato vacuole 27.91 25.74
TraesCS5A01G248100.1 Wheat plasma membrane 29.65 25.69
TraesCS5B01G245800.1 Wheat plasma membrane 29.36 25.51
GSMUA_AchrUn_... Banana golgi, plasma membrane 26.16 25.5
Bra028075.1-P Field mustard plasma membrane 26.16 25.5
Zm00001d005936_P001 Maize plasma membrane 29.07 25.45
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 26.45 25.42
Os09t0468300-00 Rice golgi, plasma membrane 28.49 25.32
GSMUA_Achr10P... Banana plasma membrane 28.49 25.26
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.2 25.13
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 15.41 25.0
Bra005375.1-P Field mustard cytosol, nucleus, plastid 22.67 24.92
HORVU4Hr1G080840.1 Barley cytosol 16.86 24.47
GSMUA_AchrUn_... Banana plastid 25.58 24.44
Zm00001d020789_P001 Maize plasma membrane 27.62 23.87
EER99041 Sorghum endoplasmic reticulum, plasma membrane 28.49 23.79
HORVU4Hr1G078260.1 Barley plasma membrane 24.42 23.53
Os03t0188200-01 Rice golgi 24.13 23.51
TraesCS3D01G495500.1 Wheat vacuole 26.16 23.32
TraesCS4D01G302600.1 Wheat plasma membrane 23.84 23.1
TraesCS4A01G404600.1 Wheat plasma membrane 23.84 23.1
TraesCS4B01G304400.1 Wheat plasma membrane 23.84 23.1
EER92732 Sorghum golgi 24.71 23.1
Zm00001d031261_P001 Maize golgi 25.29 23.08
Zm00001d027983_P001 Maize plasma membrane, plastid 24.13 22.93
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 26.74 22.77
TraesCS3B01G549900.1 Wheat vacuole 20.64 22.54
TraesCS6D01G113000.1 Wheat golgi 26.16 22.44
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 26.45 22.41
EES18560 Sorghum golgi, plasma membrane 25.58 22.39
Bra025008.1-P Field mustard plastid 18.6 22.3
Bra013268.1-P Field mustard plasma membrane 18.9 22.11
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 27.03 22.09
Os08t0484200-01 Rice golgi 26.16 21.79
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 25.29 21.53
Zm00001d048230_P001 Maize golgi 23.55 21.32
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 27.03 21.28
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 24.71 20.99
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 24.42 20.9
Zm00001d018122_P001 Maize vacuole 25.29 20.76
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 25.0 20.72
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 16.86 20.64
OQU85775 Sorghum golgi, plasma membrane, vacuole 25.29 20.57
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 24.13 20.49
HORVU6Hr1G077610.1 Barley plasma membrane 24.13 20.44
TraesCS7D01G178000.1 Wheat golgi 23.26 19.61
TraesCS7B01G081700.1 Wheat golgi 23.55 19.57
TraesCS7A01G176700.1 Wheat golgi 23.26 19.28
TraesCS4A01G104900.1 Wheat mitochondrion 21.51 19.12
Zm00001d029395_P001 Maize plasma membrane, plastid 21.22 19.06
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 24.42 19.0
Os03t0391100-00 Rice endoplasmic reticulum, golgi 23.26 18.39
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 20.35 18.09
HORVU4Hr1G057610.1 Barley plastid 21.51 17.96
TraesCS4D01G200100.1 Wheat plastid 21.22 17.63
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 21.51 17.62
Bra005343.1-P Field mustard plastid 14.24 17.56
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 27.62 17.43
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 17.44 17.24
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 20.35 16.79
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 20.35 16.67
TraesCS4B01G199100.1 Wheat plastid 21.22 16.33
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 19.48 16.11
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 18.31 15.59
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 13.95 14.29
Bra012630.1-P Field mustard nucleus 18.02 10.02
Protein Annotations
EnsemblPlants:Bra012330.1EnsemblPlants:Bra012330.1-PEnsemblPlantsGene:Bra012330Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SignalP:SignalP-TMSMART:SM00184SUPFAM:SSF57850
TMHMM:TMhelixUniParc:UPI000254148DUniProt:M4D770MapMan:19.2.2.1.5.3.3::
Description
AT1G22500 (E=1e-132) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA07:-:8436684..8437718
Molecular Weight (calculated)
38303.8 Da
IEP (calculated)
8.352
GRAVY (calculated)
-0.266
Length
344 amino acids
Sequence
(BLAST)
001: MSRFTLYPSF LLLLRLVAAQ STDTEGGAGL KPTTAIIMIV FVSVFFSLGC VSVVYMRKYL TQALGIDDGL RSGDRGNWLS ERQGACGLDA SVIETFPTFR
101: YSTVKTLRIG KAALECPVCL NGFEDDETLR LIPQCCHVFH TCCIDAWLRS HVTCPLCRAN LVPVPGESVS FEISGLARES GQNSPRTLIS DDNRRRVLGS
201: PDERLIDSVA WSGNKSMPRK SMSTGWKLAG LFSRSSSTGQ MRENLDRFKL RLPQEIHDQL VNQESKGHIA LPQVRSSIRG YRTGSLGNER NYFYFEQFDQ
301: DGRLHRRPFS ITPPYCTGSF QSLDIHGAQE PAGPHKGLIE ANQQ
Best Arabidopsis Sequence Match ( AT1G22500.1 )
(BLAST)
001: MVVMSRVSFY SSFLLLLLEV VVASSEFDDE GRTSFSPTTA IIMIVLVSVF FALGCISVYM RRCLQHALGM DSGGGPGNWL NVRQTTEPGL DASVIETFPT
101: FPYSTVKTLR IGKEALECPV CLNEFEDDET LRLIPQCCHV FHPGCIDAWL RSQTTCPLCR ANLVPVPGES VSSEIPGLAR ETGQNSLRTP IDDNRKRVLT
201: SPDERLIDSV AWTGNQSMPR KSMSTGWKLA ELYSPASSPG QPEENLDRYT LRLPQEIHDQ LVNSSLGKQG SKGQLALPQE RSSVRGFRTG SLGTEKNYFY
301: FERFDQDGRL DRRPFSITPP YHTRSIQSPD EIINASGNYQ DRAGAPKGLL LAIRSPFDRL FTGKKNAGER SYLQSGDASP V
Arabidopsis Description
ATL15E3 ubiquitin-protein ligase ATL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK92]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.