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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • golgi 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, plastid, secretory
iPSORT:plastid
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES18560 Sorghum golgi, plasma membrane 79.05 75.83
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 59.68 55.69
TraesCS6D01G113000.1 Wheat golgi 59.15 55.61
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 59.68 55.42
Os08t0484200-01 Rice golgi 60.48 55.21
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 58.62 54.7
Zm00001d005936_P001 Maize plasma membrane 49.07 47.07
Zm00001d020789_P001 Maize plasma membrane 49.07 46.48
AT4G09100.1 Thale cress extracellular 13.0 37.12
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 32.63 36.61
KRH33975 Soybean golgi, plasma membrane, vacuole 32.36 33.98
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 37.14 33.25
CDY39477 Canola extracellular 26.79 32.58
CDY53236 Canola plasma membrane 29.97 32.56
KRH68588 Soybean plasma membrane 31.57 32.51
Bra010641.1-P Field mustard extracellular, golgi 26.26 32.14
CDX90377 Canola extracellular, golgi 26.26 32.14
KRG96857 Soybean vacuole 31.83 32.0
CDX75097 Canola extracellular 11.67 31.88
Zm00001d003499_P001 Maize endoplasmic reticulum, golgi, plasma membrane 32.63 31.7
CDX82175 Canola extracellular 19.63 31.62
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 34.75 31.57
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 31.57 31.4
KRH72413 Soybean cytosol, golgi, vacuole 31.03 31.28
Zm00001d018122_P001 Maize vacuole 34.22 30.79
Bra038386.1-P Field mustard extracellular 11.14 30.43
CDY48058 Canola extracellular 11.14 30.43
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 25.99 30.34
Bra040642.1-P Field mustard plasma membrane 30.5 29.79
CDY18787 Canola plasma membrane 30.5 29.72
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 26.79 29.71
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 25.99 29.34
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 28.12 28.8
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 30.24 28.64
Bra005375.1-P Field mustard cytosol, nucleus, plastid 23.61 28.43
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 23.61 28.43
AT3G05200.1 Thale cress plasma membrane 29.97 28.39
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 29.97 28.39
Bra036631.1-P Field mustard plasma membrane 26.26 28.29
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 26.26 28.29
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 26.79 28.13
CDX84270 Canola cytosol, plastid, vacuole 23.34 28.11
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 31.3 28.1
Zm00001d027983_P001 Maize plasma membrane, plastid 26.79 27.9
CDX99986 Canola plasma membrane 25.73 27.79
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 29.18 27.64
Zm00001d029395_P001 Maize plasma membrane, plastid 27.85 27.42
Zm00001d048230_P001 Maize golgi 27.59 27.37
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.85 27.2
CDY31657 Canola extracellular, plasma membrane, plastid 26.53 27.17
CDX80653 Canola plasma membrane 21.75 27.06
CDY25038 Canola plasma membrane 26.53 27.03
Bra009962.1-P Field mustard mitochondrion, plastid 20.42 26.92
CDY70284 Canola plasma membrane 27.59 26.74
Zm00001d030038_P001 Maize plastid 16.45 26.72
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 21.49 26.64
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 21.49 26.64
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 25.99 26.63
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 25.99 26.63
PGSC0003DMT400073575 Potato extracellular, plasma membrane 30.5 26.56
CDX82179 Canola plasma membrane 24.67 26.5
CDY05577 Canola plasma membrane 26.79 26.44
Zm00001d016901_P001 Maize vacuole 24.14 26.22
CDY62007 Canola golgi, plasma membrane 25.99 26.06
CDX82176 Canola extracellular 25.2 26.03
CDX86163 Canola plasma membrane 20.69 26.0
Bra020591.1-P Field mustard plasma membrane 26.26 25.98
AT1G35330.1 Thale cress endoplasmic reticulum 22.55 25.91
Bra008016.1-P Field mustard plasma membrane 27.59 25.81
CDY03651 Canola plasma membrane 27.59 25.81
Bra040855.1-P Field mustard golgi, plasma membrane 25.73 25.8
CDY21367 Canola golgi, plasma membrane 25.73 25.8
AT4G09120.1 Thale cress plasma membrane 23.34 25.51
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 25.46 25.4
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 26.26 25.32
Bra012330.1-P Field mustard golgi, plasma membrane 23.08 25.29
AT1G72200.1 Thale cress plasma membrane 27.06 25.25
AT1G22500.1 Thale cress plasma membrane 25.46 25.2
KRH16794 Soybean plasma membrane 25.99 25.0
KRH72412 Soybean nucleus, plasma membrane, plastid 25.46 24.87
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 19.89 24.83
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 22.28 24.78
Bra008015.1-P Field mustard plasma membrane 25.99 24.75
CDY03652 Canola plasma membrane 25.99 24.75
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 25.73 24.68
CDY05049 Canola plasma membrane 19.1 24.66
CDX90713 Canola extracellular, golgi, plasma membrane 22.02 24.48
Zm00001d026494_P001 Maize plastid 13.0 24.14
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 22.81 24.09
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 21.75 23.56
AT2G34990.2 Thale cress plasma membrane 20.16 23.46
Solyc12g087860.1.1 Tomato vacuole 23.08 23.32
CDY12022 Canola plasma membrane 21.75 23.23
PGSC0003DMT400045807 Potato plasma membrane 23.08 23.02
Bra028075.1-P Field mustard plasma membrane 21.49 22.95
CDY03116 Canola plasma membrane 20.95 22.38
CDY70750 Canola extracellular, mitochondrion, nucleus 16.45 20.46
CDY05145 Canola plasma membrane 15.92 20.2
CDY27787 Canola extracellular, plasma membrane, vacuole 15.92 19.93
Zm00001d039216_P001 Maize endoplasmic reticulum, extracellular, golgi 19.36 18.67
CDY12527 Canola extracellular, plasma membrane, vacuole 11.41 18.07
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 11.41 18.07
Zm00001d009777_P001 Maize extracellular, golgi, plasma membrane 19.36 17.94
Zm00001d014612_P001 Maize peroxisome 17.51 16.62
CDY50446 Canola mitochondrion 9.81 15.48
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10UniProt:A0A1D6KHR2GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016874InterPro:IPR001841InterPro:IPR013083ProteinID:ONM02541.1
PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF322SMART:SM00184SMART:SM01197
SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000221C379EnsemblPlantsGene:Zm00001d031261EnsemblPlants:Zm00001d031261_P001
EnsemblPlants:Zm00001d031261_T001InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
E3 ubiquitin-protein ligase ATL6
Coordinates
chr1:+:184229339..184230472
Molecular Weight (calculated)
40130.7 Da
IEP (calculated)
8.807
GRAVY (calculated)
-0.154
Length
377 amino acids
Sequence
(BLAST)
001: MGPINGRRRR RLLLLAAVAL AGAAVDAQPD YFNPKNFNPS MAIVMVVLVT AFFLLGFFSI YLRRCAGPPL GGPDDHYHAR QLGLGLGNNS YAPPPSRRMR
101: GLDRAVLDSF PTMAYADVRA HKGALECAVC LSEFDDGDTL RLLPRCAHAF HTDCIDAWLA SHVTCPVCRA ILLVPDAAEP TALAAAPVTA APDDDHAVVV
201: DAAAAAGETE DQRLRREEAA ELLRIASAKR ALRSNKSQFP RSHTTGHSLA APSPAGSPSS TSDAERYTLR LPDHVLREAV AAANLRRSAS VQTGADGTTT
301: RRGFAIAGRA GTGRSVRLGN SSGRWPSMSL LLARTFSARR PVTRRGEADA DAPDKFAGYD GKTIVEQCHD GGACSLV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.