Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020591.1-P Field mustard plasma membrane 95.68 92.91
CDY05577 Canola plasma membrane 95.68 92.67
CDX99986 Canola plasma membrane 74.59 79.08
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 74.32 78.57
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 75.95 76.36
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 54.32 66.12
CDX86163 Canola plasma membrane 52.97 65.33
CDX80653 Canola plasma membrane 52.97 64.69
CDY53236 Canola plasma membrane 58.65 62.54
CDY18787 Canola plasma membrane 61.35 58.66
CDY05145 Canola plasma membrane 43.51 54.21
CDY27787 Canola extracellular, plasma membrane, vacuole 44.05 54.15
CDY70750 Canola extracellular, mitochondrion, nucleus 42.7 52.15
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 35.68 39.29
KRH33975 Soybean golgi, plasma membrane, vacuole 37.84 39.0
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 30.54 37.05
KRG96857 Soybean vacuole 37.03 36.53
CDX82175 Canola extracellular 22.43 35.47
GSMUA_AchrUn_... Banana golgi, plasma membrane 33.78 35.41
CDX90377 Canola extracellular, golgi 29.46 35.39
KRH68588 Soybean plasma membrane 34.86 35.25
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 32.7 35.07
CDY39477 Canola extracellular 28.92 34.52
GSMUA_Achr10P... Banana plasma membrane 35.95 34.28
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 32.97 34.08
GSMUA_Achr6P30500_001 Banana plasma membrane 26.76 33.9
Zm00001d005936_P001 Maize plasma membrane 35.95 33.84
GSMUA_Achr3P20400_001 Banana mitochondrion 31.08 33.43
CDX75097 Canola extracellular 12.43 33.33
CDY31686 Canola nucleus 9.46 33.33
CDY48058 Canola extracellular 12.43 33.33
Os09t0468300-00 Rice golgi, plasma membrane 34.86 33.33
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 37.84 33.33
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 34.86 32.91
HORVU5Hr1G069980.1 Barley plasma membrane 34.05 32.81
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 34.05 32.47
TraesCS5B01G245800.1 Wheat plasma membrane 34.59 32.32
TraesCS5A01G248100.1 Wheat plasma membrane 34.59 32.24
Zm00001d020789_P001 Maize plasma membrane 34.59 32.16
GSMUA_AchrUn_... Banana plastid 31.08 31.94
CDY05049 Canola plasma membrane 25.14 31.85
EER99041 Sorghum endoplasmic reticulum, plasma membrane 35.14 31.55
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 11.89 30.99
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 30.0 30.16
CDY31657 Canola extracellular, plasma membrane, plastid 30.0 30.16
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 17.03 29.72
CDX82179 Canola plasma membrane 27.57 29.06
TraesCS3D01G495500.1 Wheat vacuole 30.27 29.02
CDX90713 Canola extracellular, golgi, plasma membrane 26.49 28.91
CDY03202 Canola plasma membrane 21.89 28.83
CDY70284 Canola plasma membrane 30.0 28.53
CDX82176 Canola extracellular 28.11 28.49
CDY35174 Canola plasma membrane 21.62 28.47
CDY21367 Canola golgi, plasma membrane 28.92 28.46
CDY62007 Canola golgi, plasma membrane 28.92 28.46
TraesCS3B01G549900.1 Wheat vacuole 24.05 28.25
CDY03651 Canola plasma membrane 30.54 28.04
HORVU4Hr1G078260.1 Barley plasma membrane 27.03 28.01
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 30.54 27.97
TraesCS6D01G113000.1 Wheat golgi 30.27 27.93
CDY03116 Canola plasma membrane 26.49 27.76
Zm00001d018122_P001 Maize vacuole 31.35 27.68
Os08t0484200-01 Rice golgi 30.81 27.6
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 30.27 27.59
CDY12022 Canola plasma membrane 26.22 27.48
Os03t0188200-01 Rice golgi 26.22 27.48
CDX84270 Canola cytosol, plastid, vacuole 23.24 27.48
TraesCS4A01G404600.1 Wheat plasma membrane 26.22 27.32
EES18560 Sorghum golgi, plasma membrane 28.92 27.23
CDX78812 Canola plasma membrane 21.62 27.21
CDY44502 Canola plasma membrane 21.62 27.21
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 21.08 27.18
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 21.08 27.18
TraesCS4D01G302600.1 Wheat plasma membrane 25.95 27.04
HORVU4Hr1G080840.1 Barley cytosol 17.3 27.0
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 30.27 26.99
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 29.46 26.98
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 29.19 26.87
CDY03652 Canola plasma membrane 28.65 26.77
TraesCS4B01G304400.1 Wheat plasma membrane 25.68 26.76
Zm00001d031261_P001 Maize golgi 27.03 26.53
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.92 26.42
CDY01502 Canola plasma membrane 21.08 26.26
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 22.16 26.2
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 30.81 26.09
OQU85775 Sorghum golgi, plasma membrane, vacuole 29.73 26.0
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 28.38 25.93
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 29.46 25.89
HORVU6Hr1G077610.1 Barley plasma membrane 28.11 25.62
TraesCS4A01G104900.1 Wheat mitochondrion 26.76 25.58
TraesCS7B01G081700.1 Wheat golgi 28.11 25.12
TraesCS7D01G178000.1 Wheat golgi 27.57 25.0
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 29.73 24.89
CDY62419 Canola cytosol 10.0 24.67
TraesCS7A01G176700.1 Wheat golgi 27.57 24.58
TraesCS4D01G200100.1 Wheat plastid 27.3 24.4
HORVU4Hr1G057610.1 Barley plastid 27.03 24.27
EER92732 Sorghum golgi 24.05 24.18
Zm00001d048230_P001 Maize golgi 24.59 23.95
CDY05713 Canola extracellular 9.46 23.81
Zm00001d029395_P001 Maize plasma membrane, plastid 24.32 23.5
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 24.05 23.0
Zm00001d027983_P001 Maize plasma membrane, plastid 22.43 22.93
TraesCS4B01G199100.1 Wheat plastid 26.76 22.15
Os03t0391100-00 Rice endoplasmic reticulum, golgi 25.95 22.07
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 23.51 20.91
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 30.0 20.37
CDY12527 Canola extracellular, plasma membrane, vacuole 12.16 18.91
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 11.89 18.49
CDX98867 Canola endoplasmic reticulum, golgi 17.57 18.41
CDX70126 Canola plasma membrane 18.65 17.12
CDY13888 Canola plasma membrane 17.03 17.03
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 17.57 16.97
CDY50930 Canola endoplasmic reticulum, plasma membrane 18.38 16.19
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 16.22 16.17
CDX92900 Canola endoplasmic reticulum, plasma membrane 18.11 16.14
CDY06859 Canola endoplasmic reticulum, plasma membrane 18.11 16.07
CDY35230 Canola endoplasmic reticulum, plasma membrane 18.11 16.07
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 17.57 15.93
CDY66475 Canola endoplasmic reticulum, plasma membrane 17.57 15.89
CDY50446 Canola mitochondrion 10.0 15.48
CDX90435 Canola nucleus 21.08 12.7
CDY05714 Canola cytosol 4.32 7.51
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:A0A078GKD7UniProt:A0A078GKD7EnsemblPlants:CDY25038ProteinID:CDY25038
ProteinID:CDY25038.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00028866001InterPro:IPR001841
InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF414SMART:SM00184
SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EBF424InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
BnaC02g39700DBnaC02g39700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKD7]
Coordinates
chrLK032167:-:423421..424533
Molecular Weight (calculated)
40789.9 Da
IEP (calculated)
8.407
GRAVY (calculated)
-0.230
Length
370 amino acids
Sequence
(BLAST)
001: MKQPSLPIAV LFLLLTMSEL ASGQPSQSDP NNRYDYGGRL SPVMAVVVVV VIALLFFMGF FTIYLRHCTS ASDGGSVNPR VGARRVINAT VARGLDAEML
101: ETFPTFVYSE VKTQMIGKGA LECAICLNEF EDDETLRLLP KCDHVFHPHC IDAWLKSHVT CPVCRTNLAE QEQTTAGPVE PEVVTEIDLE SQQTVVPEPA
201: VEDGSVARVK LPRSHTTGHS VVLPGECTER FTLRLPEDLR KKIMANWKMN RSNSLLVRSR SGKPVERSRA RSDRWLFIKT PSFLWRSRDD GSIRLGGNGS
301: VKANAVTSPT GDSVRAERWN FLRNPSFMWR GTPVPSPRVE VNKDGEGTSS VQGQHTGTVG LSSGSVRLPV
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.