Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010349.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 98.53 | 95.95 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 95.35 | 95.59 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 81.66 | 80.1 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 80.93 | 79.38 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 79.71 | 78.55 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 80.2 | 78.1 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 79.46 | 75.23 |
| CDY05713 | Canola | extracellular | 23.23 | 64.63 |
| CDY13888 | Canola | plasma membrane | 55.26 | 61.08 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.26 | 60.92 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 55.5 | 59.27 |
| CDY05714 | Canola | cytosol | 28.12 | 53.99 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 40.34 | 50.93 |
| PGSC0003DMT400070587 | Potato | plastid | 42.05 | 50.0 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 47.68 | 46.54 |
| KRH76331 | Soybean | endoplasmic reticulum | 47.19 | 45.31 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 40.83 | 45.14 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 41.08 | 44.09 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 46.94 | 40.94 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 33.99 | 39.6 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 34.23 | 38.15 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 33.01 | 37.6 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 32.76 | 36.41 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 20.78 | 35.71 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 31.05 | 32.23 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 30.81 | 32.06 |
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 29.58 | 30.95 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 28.61 | 30.39 |
| CDX75097 | Canola | extracellular | 10.02 | 29.71 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 25.18 | 29.18 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 30.81 | 29.17 |
| CDY48058 | Canola | extracellular | 9.78 | 28.99 |
| Zm00001d009777_P001 | Maize | extracellular, golgi, plasma membrane | 28.61 | 28.75 |
| TraesCS1D01G453000.1 | Wheat | extracellular, plasma membrane | 30.32 | 28.57 |
| CDY31686 | Canola | nucleus | 7.09 | 27.62 |
| CDX70126 | Canola | plasma membrane | 26.65 | 27.05 |
| EES18815 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 31.05 | 26.85 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.05 | 26.06 |
| CDX82175 | Canola | extracellular | 13.94 | 24.36 |
| CDX90377 | Canola | extracellular, golgi | 16.63 | 22.08 |
| CDY21367 | Canola | golgi, plasma membrane | 20.29 | 22.07 |
| CDY62007 | Canola | golgi, plasma membrane | 20.29 | 22.07 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.14 | 21.71 |
| CDY39477 | Canola | extracellular | 16.38 | 21.61 |
| CDY62419 | Canola | cytosol | 7.82 | 21.33 |
| CDY53236 | Canola | plasma membrane | 18.09 | 21.33 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 14.67 | 20.91 |
| CDX80653 | Canola | plasma membrane | 15.4 | 20.79 |
| CDY70284 | Canola | plasma membrane | 19.56 | 20.57 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 14.18 | 20.21 |
| CDX86163 | Canola | plasma membrane | 14.67 | 20.0 |
| CDY03651 | Canola | plasma membrane | 19.56 | 19.85 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 15.16 | 19.81 |
| CDX99986 | Canola | plasma membrane | 16.87 | 19.77 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.87 | 19.71 |
| CDY18787 | Canola | plasma membrane | 18.58 | 19.64 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 14.91 | 19.49 |
| CDY44502 | Canola | plasma membrane | 13.94 | 19.39 |
| CDX78812 | Canola | plasma membrane | 13.94 | 19.39 |
| CDY05049 | Canola | plasma membrane | 13.45 | 18.84 |
| CDX82176 | Canola | extracellular | 16.63 | 18.63 |
| CDY03202 | Canola | plasma membrane | 12.71 | 18.51 |
| CDY35174 | Canola | plasma membrane | 12.71 | 18.51 |
| CDX82179 | Canola | plasma membrane | 15.65 | 18.23 |
| CDY03116 | Canola | plasma membrane | 15.4 | 17.85 |
| CDY01502 | Canola | plasma membrane | 12.96 | 17.85 |
| CDY25038 | Canola | plasma membrane | 15.89 | 17.57 |
| CDY12022 | Canola | plasma membrane | 15.16 | 17.56 |
| CDY03652 | Canola | plasma membrane | 16.63 | 17.17 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 15.4 | 17.12 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 15.4 | 17.12 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 14.18 | 17.11 |
| CDY05577 | Canola | plasma membrane | 15.89 | 17.02 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 8.56 | 14.71 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 8.07 | 13.87 |
| CDY31685 | Canola | cytosol | 0.73 | 13.64 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 7.82 | 10.56 |
| CDY05145 | Canola | plasma membrane | 7.33 | 10.1 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 7.33 | 9.97 |
| CDY50446 | Canola | mitochondrion | 5.13 | 8.79 |
| CDX90435 | Canola | nucleus | 12.96 | 8.63 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | GO:A0A078JJ27 | UniProt:A0A078JJ27 | EnsemblPlants:CDY66475 | ProteinID:CDY66475 |
| ProteinID:CDY66475.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00054403001 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF431 | SMART:SM00184 |
| SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE1503 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g30720DBnaA08g30720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ27]
Coordinates
chrLK035282:-:2828..4090
Molecular Weight (calculated)
47053.9 Da
IEP (calculated)
8.940
GRAVY (calculated)
-0.454
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQIFFFFFF VTTFHSYYYV SAQPPAPPLS NGDLVANFEP SLAIVTGVLA IMFALTFVLL VYAKCCHMDL LSGSGDGRRQ DRLTRQGFFF NRSTNSSARF
101: SGLDKTAIES LPMFRFSALK GSKQGLECSV CLSKFESVEI LRLLPKCRHA FHIGCIDQWL EQHATCPLCR DRVSIEEDTS VYVNSFRFLN ESARREDSSL
201: EIYIEREEEE ERRRRQREEV GSSSRFSIGG SFRKILKLGH KEKPLLEQQG NDKDENKVMH KFNHRIFVSD VVFKNRWSNV SSSDLMFLNS EMVSSISSER
301: FSFRRSKEED QRGNLRFKED MENKLSSMKT MLLSESKDSG RRSVSEITTV PRLSIAVHGD CSGSNAATAS ETEERRRRLW LPIASKTAQL FANREKRNQI
401: NTTVQHFNV
101: SGLDKTAIES LPMFRFSALK GSKQGLECSV CLSKFESVEI LRLLPKCRHA FHIGCIDQWL EQHATCPLCR DRVSIEEDTS VYVNSFRFLN ESARREDSSL
201: EIYIEREEEE ERRRRQREEV GSSSRFSIGG SFRKILKLGH KEKPLLEQQG NDKDENKVMH KFNHRIFVSD VVFKNRWSNV SSSDLMFLNS EMVSSISSER
301: FSFRRSKEED QRGNLRFKED MENKLSSMKT MLLSESKDSG RRSVSEITTV PRLSIAVHGD CSGSNAATAS ETEERRRRLW LPIASKTAQL FANREKRNQI
401: NTTVQHFNV
001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
Arabidopsis Description
ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.