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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040855.1-P Field mustard golgi, plasma membrane 100.0 100.0
CDY62007 Canola golgi, plasma membrane 97.61 97.61
CDY12527 Canola extracellular, plasma membrane, vacuole 50.0 78.99
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 49.2 77.73
AT1G22500.1 Thale cress plasma membrane 78.72 77.69
CDY70284 Canola plasma membrane 64.89 62.72
CDY03651 Canola plasma membrane 65.16 60.79
CDX82179 Canola plasma membrane 54.26 58.12
CDY50446 Canola mitochondrion 35.9 56.49
CDX82176 Canola extracellular 52.93 54.52
CDY03652 Canola plasma membrane 55.59 52.78
CDX82175 Canola extracellular 31.38 50.43
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 32.71 36.83
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 32.71 36.18
KRH72413 Soybean cytosol, golgi, vacuole 35.11 35.29
CDX75097 Canola extracellular 12.77 34.78
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 34.84 34.56
CDY48058 Canola extracellular 12.5 34.06
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 35.9 33.92
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 30.32 32.57
CDY53236 Canola plasma membrane 30.05 32.56
CDY05049 Canola plasma membrane 25.27 32.53
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 33.78 32.48
CDY39477 Canola extracellular 26.6 32.26
CDX90377 Canola extracellular, golgi 26.33 32.14
CDX99986 Canola plasma membrane 29.79 32.09
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 32.98 31.55
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 25.53 31.48
CDY31657 Canola extracellular, plasma membrane, plastid 30.59 31.25
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 30.32 30.98
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 25.0 30.92
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 28.19 30.72
CDX90713 Canola extracellular, golgi, plasma membrane 27.66 30.68
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 31.65 30.67
PGSC0003DMT400045807 Potato plasma membrane 30.32 30.16
Solyc12g087860.1.1 Tomato vacuole 29.79 30.03
CDX80653 Canola plasma membrane 23.94 29.7
CDY18787 Canola plasma membrane 30.32 29.46
GSMUA_Achr6P30500_001 Banana plasma membrane 22.87 29.45
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 30.59 29.34
CDY05713 Canola extracellular 11.44 29.25
Os09t0468300-00 Rice golgi, plasma membrane 30.05 29.2
GSMUA_Achr3P20400_001 Banana mitochondrion 26.6 29.07
CDX86163 Canola plasma membrane 23.14 29.0
CDY25038 Canola plasma membrane 28.46 28.92
GSMUA_AchrUn_... Banana golgi, plasma membrane 27.13 28.9
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.22 28.77
KRH72412 Soybean nucleus, plasma membrane, plastid 29.52 28.76
TraesCS5A01G248100.1 Wheat plasma membrane 30.32 28.72
HORVU5Hr1G069980.1 Barley plasma membrane 29.26 28.65
CDY05577 Canola plasma membrane 28.99 28.53
Zm00001d005936_P001 Maize plasma membrane 29.79 28.5
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 27.13 28.49
CDX84270 Canola cytosol, plastid, vacuole 23.67 28.43
TraesCS5B01G245800.1 Wheat plasma membrane 29.79 28.28
GSMUA_Achr10P... Banana plasma membrane 28.99 28.09
KRH16794 Soybean plasma membrane 28.99 27.81
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 23.14 27.8
Zm00001d020789_P001 Maize plasma membrane 29.26 27.64
CDY31686 Canola nucleus 7.71 27.62
CDY03116 Canola plasma membrane 25.8 27.48
EER99041 Sorghum endoplasmic reticulum, plasma membrane 29.52 26.94
CDY12022 Canola plasma membrane 25.27 26.91
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 10.11 26.76
GSMUA_AchrUn_... Banana plastid 25.53 26.67
TraesCS3B01G549900.1 Wheat vacuole 22.34 26.67
TraesCS3D01G495500.1 Wheat vacuole 27.13 26.42
HORVU4Hr1G078260.1 Barley plasma membrane 24.47 25.77
HORVU4Hr1G080840.1 Barley cytosol 16.22 25.74
Zm00001d031261_P001 Maize golgi 25.8 25.73
EES18560 Sorghum golgi, plasma membrane 26.86 25.7
Zm00001d027983_P001 Maize plasma membrane, plastid 24.73 25.69
EER92732 Sorghum golgi 25.0 25.54
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 27.13 25.25
Os03t0188200-01 Rice golgi 23.67 25.21
TraesCS4A01G404600.1 Wheat plasma membrane 23.67 25.07
TraesCS4D01G302600.1 Wheat plasma membrane 23.67 25.07
TraesCS6D01G113000.1 Wheat golgi 26.6 24.94
TraesCS4B01G304400.1 Wheat plasma membrane 23.4 24.79
Os08t0484200-01 Rice golgi 27.13 24.7
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 26.6 24.63
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 26.06 24.26
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 27.13 24.23
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.53 23.88
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 26.33 23.86
Zm00001d048230_P001 Maize golgi 23.94 23.68
Zm00001d018122_P001 Maize vacuole 26.33 23.63
CDX78812 Canola plasma membrane 18.35 23.47
CDY44502 Canola plasma membrane 18.35 23.47
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.27 23.46
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 27.13 23.34
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.0 23.21
OQU85775 Sorghum golgi, plasma membrane, vacuole 26.06 23.17
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 17.55 23.0
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 17.55 23.0
HORVU6Hr1G077610.1 Barley plasma membrane 24.73 22.91
CDY03202 Canola plasma membrane 17.02 22.78
CDY35174 Canola plasma membrane 17.02 22.78
Zm00001d029395_P001 Maize plasma membrane, plastid 23.14 22.72
CDY01502 Canola plasma membrane 17.82 22.56
TraesCS7D01G178000.1 Wheat golgi 23.94 22.06
CDY62419 Canola cytosol 8.78 22.0
TraesCS7B01G081700.1 Wheat golgi 24.2 21.98
TraesCS7A01G176700.1 Wheat golgi 23.94 21.69
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 25.27 21.49
TraesCS4A01G104900.1 Wheat mitochondrion 22.07 21.45
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 21.54 20.93
Os03t0391100-00 Rice endoplasmic reticulum, golgi 23.94 20.69
HORVU4Hr1G057610.1 Barley plastid 22.61 20.63
CDY66475 Canola endoplasmic reticulum, plasma membrane 22.07 20.29
TraesCS4D01G200100.1 Wheat plastid 22.34 20.29
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 21.54 19.85
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 19.41 19.68
CDY06859 Canola endoplasmic reticulum, plasma membrane 21.54 19.42
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 27.93 19.27
CDY35230 Canola endoplasmic reticulum, plasma membrane 21.28 19.18
CDY13888 Canola plasma membrane 18.62 18.92
CDY50930 Canola endoplasmic reticulum, plasma membrane 21.01 18.81
CDX92900 Canola endoplasmic reticulum, plasma membrane 20.74 18.8
TraesCS4B01G199100.1 Wheat plastid 22.34 18.79
CDX98867 Canola endoplasmic reticulum, golgi 17.29 18.41
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 19.95 18.03
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 18.35 18.02
CDX70126 Canola plasma membrane 18.62 17.37
CDY70750 Canola extracellular, mitochondrion, nucleus 13.83 17.16
CDY27787 Canola extracellular, plasma membrane, vacuole 13.03 16.28
CDY05145 Canola plasma membrane 12.77 16.16
CDX90435 Canola nucleus 17.82 10.91
CDY31685 Canola cytosol 0.53 9.09
CDY05714 Canola cytosol 4.26 7.51
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:A0A078G8M4UniProt:A0A078G8M4EnsemblPlants:CDY21367ProteinID:CDY21367
ProteinID:CDY21367.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00015733001InterPro:IPR001841
InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF414SMART:SM00184
SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000253E9C6InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
BnaA09g30600DBnaA09g30600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8M4]
Coordinates
chrLK032120:+:238972..240102
Molecular Weight (calculated)
41967.9 Da
IEP (calculated)
8.135
GRAVY (calculated)
-0.297
Length
376 amino acids
Sequence
(BLAST)
001: MVMSRLYFYS SFLLLLRFVA AQSSSYEQGT GFNPTTAIVM IVLVSVFFSL GCVSVYMRRC LEQALGIDDG RSGDPGNWLN VRQQTPRGLD ASVIETFPTF
101: RYSTVKTLRI GKEALECPVC LNEFEDDETL RLLPQCCHVF HPGCIDAWLR SHATCPLCRA NLVPVPGESV SFEISGLARE SGQSSPLTSI VDDNRRMALA
201: SPDERLLDSV AWTGNQSMPR KSMSTGWKLA GLFSRSSSYS QTEENLDRFT LRLPQEIHDQ LMNQGSKGHI ALPQVRSSIR GYRTGTLGTE SNYFYFERFD
301: QDGRFDRRPF SITPPYRTGL IRSPNGVING GDGYQERAGT PKSLLLAIRS PFDRLFTGKN NVGERSYLRS GDASPV
Best Arabidopsis Sequence Match ( AT1G22500.1 )
(BLAST)
001: MVVMSRVSFY SSFLLLLLEV VVASSEFDDE GRTSFSPTTA IIMIVLVSVF FALGCISVYM RRCLQHALGM DSGGGPGNWL NVRQTTEPGL DASVIETFPT
101: FPYSTVKTLR IGKEALECPV CLNEFEDDET LRLIPQCCHV FHPGCIDAWL RSQTTCPLCR ANLVPVPGES VSSEIPGLAR ETGQNSLRTP IDDNRKRVLT
201: SPDERLIDSV AWTGNQSMPR KSMSTGWKLA ELYSPASSPG QPEENLDRYT LRLPQEIHDQ LVNSSLGKQG SKGQLALPQE RSSVRGFRTG SLGTEKNYFY
301: FERFDQDGRL DRRPFSITPP YHTRSIQSPD EIINASGNYQ DRAGAPKGLL LAIRSPFDRL FTGKKNAGER SYLQSGDASP V
Arabidopsis Description
ATL15E3 ubiquitin-protein ligase ATL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK92]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.