Factsheet for TraesCS3B01G549900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G495500.1	Wheat	vacuole	88.57	72.28
HORVU5Hr1G069980.1	Barley	plasma membrane	75.87	62.24
TraesCS5B01G245800.1	Wheat	plasma membrane	77.14	61.36
Os09t0468300-00	Rice	golgi, plasma membrane	66.67	54.26
Zm00001d005936_P001	Maize	plasma membrane	64.76	51.91
EER99041	Sorghum	endoplasmic reticulum, plasma membrane	64.44	49.27
Zm00001d020789_P001	Maize	plasma membrane	62.22	49.25
TraesCS6B01G151000.1	Wheat	extracellular, golgi, plasma membrane	51.75	40.35
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	34.6	32.44
KRH33975	Soybean	golgi, plasma membrane, vacuole	36.51	32.03
KRH68588	Soybean	plasma membrane	34.92	30.05
TraesCS2B01G336300.1	Wheat	extracellular, golgi, plasma membrane	36.19	30.0
Bra010641.1-P	Field mustard	extracellular, golgi	29.21	29.87
CDX90377	Canola	extracellular, golgi	29.21	29.87
KRG96857	Soybean	vacuole	35.24	29.6
CDY39477	Canola	extracellular	28.57	29.03
CDY53236	Canola	plasma membrane	30.48	27.67
Bra036631.1-P	Field mustard	plasma membrane	29.84	26.86
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	29.84	26.86
Bra040642.1-P	Field mustard	plasma membrane	32.7	26.68
TraesCS5B01G442500.1	Wheat	golgi	28.57	26.55
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	35.24	26.43
CDX99986	Canola	plasma membrane	29.21	26.36
CDY18787	Canola	plasma membrane	32.38	26.36
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	26.98	26.32
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	30.16	25.82
KRH72413	Soybean	cytosol, golgi, vacuole	30.48	25.67
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.43	25.65
AT3G05200.1	Thale cress	plasma membrane	32.38	25.63
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	32.06	25.38
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.3	25.29
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	34.6	25.17
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	31.75	25.13
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	31.75	25.13
TraesCS6B01G346000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	31.75	24.88
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	26.35	24.85
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.81	24.67
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.81	24.67
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	29.52	24.54
Bra009962.1-P	Field mustard	mitochondrion, plastid	22.22	24.48
CDX80653	Canola	plasma membrane	23.49	24.42
CDX86163	Canola	plasma membrane	23.17	24.33
TraesCS3B01G499500.1	Wheat	vacuole	26.67	24.21
CDY25038	Canola	plasma membrane	28.25	24.05
TraesCS7B01G081700.1	Wheat	golgi	31.43	23.91
AT2G34990.2	Thale cress	plasma membrane	24.44	23.77
CDY05577	Canola	plasma membrane	28.57	23.56
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	28.25	23.55
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	27.3	23.37
CDY31657	Canola	extracellular, plasma membrane, plastid	27.3	23.37
Bra020591.1-P	Field mustard	plasma membrane	28.25	23.36
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	26.98	23.1
CDX84270	Canola	cytosol, plastid, vacuole	22.86	23.0
AT4G09100.1	Thale cress	extracellular	9.52	22.73
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	25.08	22.7
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	22.54	22.68
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	22.54	22.68
CDX82175	Canola	extracellular	16.83	22.65
AT4G09120.1	Thale cress	plasma membrane	24.76	22.61
AT1G35330.1	Thale cress	endoplasmic reticulum	23.49	22.56
KRH72412	Soybean	nucleus, plasma membrane, plastid	27.62	22.54
Bra040855.1-P	Field mustard	golgi, plasma membrane	26.67	22.34
CDY21367	Canola	golgi, plasma membrane	26.67	22.34
CDY62007	Canola	golgi, plasma membrane	26.67	22.34
CDY27787	Canola	extracellular, plasma membrane, vacuole	21.27	22.26
CDY05145	Canola	plasma membrane	20.95	22.22
CDY70750	Canola	extracellular, mitochondrion, nucleus	21.27	22.11
CDY70284	Canola	plasma membrane	27.3	22.11
AT1G72200.1	Thale cress	plasma membrane	28.25	22.03
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	25.08	22.01
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.67	21.48
TraesCS4B01G304400.1	Wheat	plasma membrane	24.13	21.41
Bra008016.1-P	Field mustard	plasma membrane	27.3	21.34
CDY03651	Canola	plasma membrane	27.3	21.34
AT1G22500.1	Thale cress	plasma membrane	25.71	21.26
Solyc12g087860.1.1	Tomato	vacuole	25.08	21.18
KRH16794	Soybean	plasma membrane	26.35	21.17
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	22.54	20.94
CDX82176	Canola	extracellular	24.13	20.82
CDY12022	Canola	plasma membrane	23.17	20.68
Bra012330.1-P	Field mustard	golgi, plasma membrane	22.54	20.64
PGSC0003DMT400045807	Potato	plasma membrane	24.76	20.63
CDX82179	Canola	plasma membrane	22.86	20.51
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	25.4	20.36
CDX90713	Canola	extracellular, golgi, plasma membrane	21.9	20.35
Bra028075.1-P	Field mustard	plasma membrane	22.54	20.11
CDY03116	Canola	plasma membrane	22.54	20.11
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	22.54	19.89
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	19.05	19.87
CDY05049	Canola	plasma membrane	18.41	19.86
TraesCS7B01G475300.1	Wheat	endoplasmic reticulum, plasma membrane	12.06	19.79
Bra038386.1-P	Field mustard	extracellular	8.57	19.57
CDX75097	Canola	extracellular	8.57	19.57
CDY48058	Canola	extracellular	8.57	19.57
Bra008015.1-P	Field mustard	plasma membrane	24.13	19.19
CDY03652	Canola	plasma membrane	24.13	19.19
CDY12527	Canola	extracellular, plasma membrane, vacuole	14.29	18.91
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	13.97	18.49
TraesCS3B01G060000.1	Wheat	mitochondrion	13.65	18.45
TraesCS4B01G199100.1	Wheat	plastid	26.03	18.34
TraesCS2B01G529100.1	Wheat	plastid	10.48	16.75
CDY50446	Canola	mitochondrion	11.43	15.06
TraesCS1B01G479700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.51	12.04
TraesCS7B01G327800.1	Wheat	plastid	14.29	11.19

Protein Annotations

EnsemblPlants:TraesCS3B01G549900.1	EnsemblPlantsGene:TraesCS3B01G549900	PANTHER:PTHR14155	PANTHER:PTHR14155:SF322	SEG:seg	SignalP:SignalP-TM
TMHMM:TMhelix	MapMan:19.2.2.1.5.3.3	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:784925676..784927304

Molecular Weight (calculated)

33685.2 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.197

Length

315 amino acids

Sequence
(BLAST)

001: MGPAPCTNGL FIVLLLVLAA ADFGSGQQNP PLLGAYYTTK FSPSRATVII VLIVILIAFF FLLPIGAAAA RPRRHQRGLD PAVLETFPTM AYADVKEHKA
101: VKGALECAVC LSEFDDDETL RLLPNVHPAS QPPQEVPPPD SATEAAPTVV IDVEESEDER IIREETDELA RIGSLKRALR SKSNRAPTHF SRSHSTGHSL
201: AAPASICTGA GIERFTLRLP KPEHADRLRR MKSLVAFTAG RQGSTYRSLR LCGDGSSRSG TSVRLGQSGR WPSFLSRTFS AAWGARSTRS AELGGSSKGG
301: KPAGAGGKSV ECKDH

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.