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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18787 Canola plasma membrane 97.67 97.42
CDY53236 Canola plasma membrane 87.05 96.83
AT3G05200.1 Thale cress plasma membrane 82.12 79.65
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 78.5 78.5
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 67.36 74.71
Bra036631.1-P Field mustard plasma membrane 57.51 63.43
Bra020591.1-P Field mustard plasma membrane 59.07 59.84
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 42.23 53.62
Bra009962.1-P Field mustard mitochondrion, plastid 39.12 52.8
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 39.38 45.24
KRH33975 Soybean golgi, plasma membrane, vacuole 40.93 44.01
KRG96857 Soybean vacuole 39.64 40.8
KRH68588 Soybean plasma membrane 37.56 39.62
GSMUA_AchrUn_... Banana golgi, plasma membrane 34.97 38.24
Zm00001d005936_P001 Maize plasma membrane 38.86 38.17
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 33.94 37.97
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 39.12 37.94
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 39.12 37.94
Bra010641.1-P Field mustard extracellular, golgi 30.05 37.66
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 37.82 37.24
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 40.41 37.14
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 29.27 37.05
GSMUA_Achr6P30500_001 Banana plasma membrane 27.98 36.99
HORVU5Hr1G069980.1 Barley plasma membrane 36.79 36.98
Bra038386.1-P Field mustard extracellular 13.21 36.96
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 34.2 36.87
Os09t0468300-00 Rice golgi, plasma membrane 36.79 36.69
TraesCS5B01G245800.1 Wheat plasma membrane 37.31 36.36
TraesCS5A01G248100.1 Wheat plasma membrane 37.31 36.27
GSMUA_Achr3P20400_001 Banana mitochondrion 31.87 35.76
Zm00001d020789_P001 Maize plasma membrane 36.27 35.18
EER99041 Sorghum endoplasmic reticulum, plasma membrane 37.31 34.95
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 34.97 34.79
GSMUA_Achr10P... Banana plasma membrane 34.72 34.54
PGSC0003DMT400073575 Potato extracellular, plasma membrane 38.6 34.41
TraesCS6D01G113000.1 Wheat golgi 34.72 33.42
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 34.46 32.92
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 31.35 32.88
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 34.46 32.76
TraesCS3B01G549900.1 Wheat vacuole 26.68 32.7
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 33.94 32.43
TraesCS3D01G495500.1 Wheat vacuole 32.38 32.38
Os08t0484200-01 Rice golgi 33.94 31.72
GSMUA_AchrUn_... Banana plastid 29.53 31.67
EES18560 Sorghum golgi, plasma membrane 32.12 31.55
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 29.02 31.2
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 27.2 30.97
Bra008016.1-P Field mustard plasma membrane 32.12 30.77
Zm00001d031261_P001 Maize golgi 29.79 30.5
Bra005375.1-P Field mustard cytosol, nucleus, plastid 24.61 30.35
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.58 30.19
Bra040855.1-P Field mustard golgi, plasma membrane 29.27 30.05
Bra012330.1-P Field mustard golgi, plasma membrane 26.68 29.94
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 10.88 29.58
HORVU4Hr1G080840.1 Barley cytosol 18.13 29.54
HORVU4Hr1G078260.1 Barley plasma membrane 27.2 29.41
Bra025008.1-P Field mustard plastid 21.76 29.27
Bra013268.1-P Field mustard plasma membrane 22.02 28.91
Os03t0188200-01 Rice golgi 26.42 28.9
TraesCS4B01G304400.1 Wheat plasma membrane 26.42 28.73
TraesCS4A01G404600.1 Wheat plasma membrane 26.42 28.73
Bra008015.1-P Field mustard plasma membrane 29.27 28.54
TraesCS4D01G302600.1 Wheat plasma membrane 26.17 28.45
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 20.47 28.11
Bra028075.1-P Field mustard plasma membrane 25.65 28.05
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 30.05 27.55
EER92732 Sorghum golgi 25.91 27.17
Zm00001d029395_P001 Maize plasma membrane, plastid 26.68 26.89
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 28.5 26.51
Zm00001d018122_P001 Maize vacuole 28.76 26.49
HORVU4Hr1G057610.1 Barley plastid 28.24 26.46
TraesCS4A01G104900.1 Wheat mitochondrion 26.42 26.36
TraesCS4D01G200100.1 Wheat plastid 27.98 26.09
OQU85775 Sorghum golgi, plasma membrane, vacuole 28.5 26.0
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.94 25.87
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 25.91 25.84
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 29.53 25.79
TraesCS7B01G081700.1 Wheat golgi 27.46 25.6
TraesCS7D01G178000.1 Wheat golgi 26.94 25.49
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.68 25.43
Zm00001d027983_P001 Maize plasma membrane, plastid 23.83 25.41
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 28.76 25.4
TraesCS7A01G176700.1 Wheat golgi 27.2 25.3
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.42 25.19
Zm00001d048230_P001 Maize golgi 24.61 25.0
HORVU6Hr1G077610.1 Barley plasma membrane 25.91 24.63
TraesCS4B01G199100.1 Wheat plastid 27.72 23.94
Os03t0391100-00 Rice endoplasmic reticulum, golgi 26.68 23.68
Bra005343.1-P Field mustard plastid 15.54 21.51
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 23.06 21.39
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 30.05 21.28
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 20.47 18.94
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 20.21 18.57
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 19.95 18.33
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 17.88 17.08
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 14.77 16.96
Bra012630.1-P Field mustard nucleus 21.24 13.25
Protein Annotations
EnsemblPlants:Bra040642.1EnsemblPlants:Bra040642.1-PEnsemblPlantsGene:Bra040642Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI000253E757UniProt:M4FHR4MapMan:19.2.2.1.5.3.3:
Description
AT3G05200 (E=1e-149) ATL6 | ATL6; protein binding / zinc ion binding
Coordinates
chrScaffold000229:+:20429..21589
Molecular Weight (calculated)
42154.3 Da
IEP (calculated)
9.154
GRAVY (calculated)
-0.264
Length
386 amino acids
Sequence
(BLAST)
001: MRRSDPLTFS GVLPIVFLLI LSAAELAAGQ GPPPPANRNE MYNNYGRVSP ALAVIVVILV AALFFMGFFS IYFRSCSGLV DPGASPAAAG GVRSRGTVTA
101: AARGLDVSVL ETFPTFVYSE VKTQKLGKGE LECAICLNEF EDDETLRLLP KCDHVFHPHC IDAWLEAHVT CPVCRANLSE GEPVEPDVEL QEVAVNPEPV
201: VDSPVPEQSV ITEVDSRRLP GVPVDIKRVK FSRSHTTGHS VVQPGECTER FTLRLPEDVR KRVMENWRLN RSGSLVALPR GGSSRRGKPS RARSDRWLFR
301: KTPSFMWRSR DDGSIRLGST RSIRANVSNS TGESTRSDRW AFLRNGSLLW RNSSVHKGGV NKDGEGTSVK PPGTGGSTSG SMRLPV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.