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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G05200.1 Thale cress plasma membrane 83.42 80.9
Bra040642.1-P Field mustard plasma membrane 78.5 78.5
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 67.1 74.43
Bra036631.1-P Field mustard plasma membrane 59.07 65.14
Bra020591.1-P Field mustard plasma membrane 59.84 60.63
Bra009962.1-P Field mustard mitochondrion, plastid 39.38 53.15
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 41.71 52.96
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 37.56 43.15
KRH33975 Soybean golgi, plasma membrane, vacuole 39.12 42.06
KRG96857 Soybean vacuole 38.86 40.0
KRH68588 Soybean plasma membrane 36.27 38.25
Bra010641.1-P Field mustard extracellular, golgi 29.27 36.69
Bra038386.1-P Field mustard extracellular 12.95 36.23
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 28.24 35.74
Zm00001d005936_P001 Maize plasma membrane 36.01 35.37
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 36.27 35.18
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 31.35 35.07
GSMUA_Achr6P30500_001 Banana plasma membrane 26.42 34.93
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 36.01 34.92
GSMUA_AchrUn_... Banana golgi, plasma membrane 31.87 34.84
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 37.82 34.76
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 34.97 34.44
HORVU5Hr1G069980.1 Barley plasma membrane 34.2 34.38
Os09t0468300-00 Rice golgi, plasma membrane 34.46 34.37
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 31.87 34.36
GSMUA_Achr3P20400_001 Banana mitochondrion 30.31 34.01
TraesCS5B01G245800.1 Wheat plasma membrane 34.46 33.59
TraesCS5A01G248100.1 Wheat plasma membrane 34.46 33.5
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 33.42 33.25
Zm00001d020789_P001 Maize plasma membrane 34.2 33.17
EER99041 Sorghum endoplasmic reticulum, plasma membrane 35.23 33.01
GSMUA_Achr10P... Banana plasma membrane 32.38 32.22
PGSC0003DMT400073575 Potato extracellular, plasma membrane 35.75 31.87
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 11.66 31.69
TraesCS3B01G549900.1 Wheat vacuole 25.65 31.43
TraesCS6D01G113000.1 Wheat golgi 32.64 31.42
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 32.38 30.94
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 32.38 30.79
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 29.27 30.71
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.84 30.66
TraesCS3D01G495500.1 Wheat vacuole 30.57 30.57
Bra005375.1-P Field mustard cytosol, nucleus, plastid 24.61 30.35
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 31.35 29.95
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 27.72 29.8
GSMUA_AchrUn_... Banana plastid 27.46 29.44
EES18560 Sorghum golgi, plasma membrane 29.53 29.01
Os08t0484200-01 Rice golgi 30.31 28.33
Bra028075.1-P Field mustard plasma membrane 25.91 28.33
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 24.87 28.32
HORVU4Hr1G080840.1 Barley cytosol 17.36 28.27
Bra012330.1-P Field mustard golgi, plasma membrane 25.13 28.2
Bra008016.1-P Field mustard plasma membrane 29.27 28.04
Zm00001d031261_P001 Maize golgi 27.2 27.85
HORVU4Hr1G078260.1 Barley plasma membrane 25.65 27.73
Bra040855.1-P Field mustard golgi, plasma membrane 26.94 27.66
Bra013268.1-P Field mustard plasma membrane 20.73 27.21
Os03t0188200-01 Rice golgi 24.61 26.91
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 29.27 26.84
Bra008015.1-P Field mustard plasma membrane 27.46 26.77
TraesCS4B01G304400.1 Wheat plasma membrane 24.61 26.76
TraesCS4A01G404600.1 Wheat plasma membrane 24.61 26.76
TraesCS4D01G302600.1 Wheat plasma membrane 24.35 26.48
Bra025008.1-P Field mustard plastid 19.43 26.13
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.2 26.12
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 27.98 26.02
Zm00001d018122_P001 Maize vacuole 28.24 26.01
TraesCS7B01G081700.1 Wheat golgi 27.72 25.85
EER92732 Sorghum golgi 24.61 25.82
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 29.53 25.79
TraesCS7D01G178000.1 Wheat golgi 27.2 25.74
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.94 25.68
TraesCS7A01G176700.1 Wheat golgi 27.46 25.54
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.17 24.94
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 18.13 24.91
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 27.98 24.71
HORVU6Hr1G077610.1 Barley plasma membrane 25.91 24.63
OQU85775 Sorghum golgi, plasma membrane, vacuole 26.94 24.59
Zm00001d048230_P001 Maize golgi 24.09 24.47
Zm00001d029395_P001 Maize plasma membrane, plastid 24.09 24.28
TraesCS4A01G104900.1 Wheat mitochondrion 24.09 24.03
HORVU4Hr1G057610.1 Barley plastid 25.39 23.79
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 23.83 23.77
Zm00001d027983_P001 Maize plasma membrane, plastid 22.02 23.48
TraesCS4D01G200100.1 Wheat plastid 25.13 23.43
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 23.58 21.88
Os03t0391100-00 Rice endoplasmic reticulum, golgi 24.61 21.84
TraesCS4B01G199100.1 Wheat plastid 24.87 21.48
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 29.02 20.55
Bra005343.1-P Field mustard plastid 14.25 19.71
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 18.39 17.03
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 18.39 16.9
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 17.88 16.43
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 16.84 16.09
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 13.73 15.77
Bra012630.1-P Field mustard nucleus 20.21 12.6
Protein Annotations
EnsemblPlants:Bra039454.1EnsemblPlants:Bra039454.1-PEnsemblPlantsGene:Bra039454Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI000254748FUniProt:M4FED3MapMan:19.2.2.1.5.3.3:
Description
AT3G05200 (E=2e-154) ATL6 | ATL6; protein binding / zinc ion binding
Coordinates
chrA05:-:23401838..23402998
Molecular Weight (calculated)
42406.7 Da
IEP (calculated)
9.640
GRAVY (calculated)
-0.238
Length
386 amino acids
Sequence
(BLAST)
001: MRRSDHAFSG VLPVVFLCIL SAAELVAGQG QPDQRNEVYS YGKISPAMAV IVVILIAALF FMGFFSIYFR HYSALPDAAV SPAGGARPRG VFNAAVARGL
101: DVSVVETFPT FVYSEVKTQK LGKGQLECAI CLNEFEDDET LRLVPKCDHV FHPHCIGAWL EAHVTCPVCR ANLAEQVAKD ESVEPDVELQ QVVLNPEPVV
201: IAPVQEQSVT SEIDSRRLPG VPVDLKRAKF SRSHTTGHLV VQPGECTERF TLRLPEDARK RMMANWKLSR SNSLLVLSRG GSSRRGKPID RSRARSDRWL
301: YRKTSSFLWR SRDDGSIKLG GTGSVRANAV PNSTGDSVRS DRWAILRNAS FLWRNSSVQG RKDKEGTSVK PPGTGGSTSG SDRLPV
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.