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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:peroxisome, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER92732 Sorghum golgi 78.45 77.17
Zm00001d048230_P001 Maize golgi 76.8 73.16
Os03t0188200-01 Rice golgi 60.5 62.04
TraesCS4B01G304400.1 Wheat plasma membrane 58.84 60.0
TraesCS4A01G404600.1 Wheat plasma membrane 58.56 59.72
HORVU4Hr1G078260.1 Barley plasma membrane 58.84 59.66
TraesCS4D01G302600.1 Wheat plasma membrane 57.46 58.59
AT4G09100.1 Thale cress extracellular 14.09 38.64
CDX75097 Canola extracellular 12.43 32.61
Bra038386.1-P Field mustard extracellular 12.15 31.88
CDY48058 Canola extracellular 12.15 31.88
CDX82175 Canola extracellular 19.06 29.49
GSMUA_Achr3P20400_001 Banana mitochondrion 26.8 28.2
GSMUA_AchrUn_... Banana golgi, plasma membrane 27.35 28.05
Zm00001d005936_P001 Maize plasma membrane 30.11 27.74
Bra010641.1-P Field mustard extracellular, golgi 23.2 27.27
CDX90377 Canola extracellular, golgi 23.2 27.27
CDY39477 Canola extracellular 23.2 27.1
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 25.14 27.08
Zm00001d031261_P001 Maize golgi 27.9 26.79
CDY53236 Canola plasma membrane 25.41 26.51
Zm00001d020789_P001 Maize plasma membrane 29.01 26.38
KRH72413 Soybean cytosol, golgi, vacuole 27.07 26.2
KRH68588 Soybean plasma membrane 26.24 25.96
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 23.76 25.75
KRG96857 Soybean vacuole 26.52 25.6
KRH33975 Soybean golgi, plasma membrane, vacuole 25.14 25.35
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 26.52 25.33
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 23.76 25.29
Zm00001d003499_P001 Maize endoplasmic reticulum, golgi, plasma membrane 27.07 25.26
Zm00001d026494_P001 Maize plastid 14.09 25.12
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 24.59 24.79
Bra040855.1-P Field mustard golgi, plasma membrane 25.69 24.73
CDY21367 Canola golgi, plasma membrane 25.69 24.73
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 21.82 24.46
CDY70284 Canola plasma membrane 26.24 24.42
CDY18787 Canola plasma membrane 25.97 24.29
Bra005375.1-P Field mustard cytosol, nucleus, plastid 20.99 24.28
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 20.99 24.28
AT1G72200.1 Thale cress plasma membrane 27.07 24.26
CDY62007 Canola golgi, plasma membrane 25.14 24.2
Bra012330.1-P Field mustard golgi, plasma membrane 22.93 24.13
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 20.17 24.01
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 20.17 24.01
CDX84270 Canola cytosol, plastid, vacuole 20.72 23.96
CDY31657 Canola extracellular, plasma membrane, plastid 24.31 23.91
Bra040642.1-P Field mustard plasma membrane 25.41 23.83
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 24.03 23.64
CDX82176 Canola extracellular 23.76 23.56
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 27.35 23.52
Zm00001d029395_P001 Maize plasma membrane, plastid 24.86 23.5
AT2G34990.2 Thale cress plasma membrane 20.99 23.46
Zm00001d016901_P001 Maize vacuole 22.38 23.34
CDX80653 Canola plasma membrane 19.34 23.1
Bra008016.1-P Field mustard plasma membrane 25.69 23.08
CDX82179 Canola plasma membrane 22.38 23.08
CDY03651 Canola plasma membrane 25.69 23.08
CDY05049 Canola plasma membrane 18.51 22.95
AT3G05200.1 Thale cress plasma membrane 25.14 22.86
Zm00001d030038_P001 Maize plastid 14.64 22.84
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 23.2 22.83
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 23.2 22.83
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 23.76 22.75
CDX86163 Canola plasma membrane 18.78 22.67
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 24.86 22.61
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 24.86 22.61
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 18.78 22.52
CDY25038 Canola plasma membrane 22.93 22.43
Bra009962.1-P Field mustard mitochondrion, plastid 17.68 22.38
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 24.59 22.36
CDY05577 Canola plasma membrane 23.48 22.25
Bra008015.1-P Field mustard plasma membrane 24.31 22.22
CDY03652 Canola plasma membrane 24.31 22.22
AT1G22500.1 Thale cress plasma membrane 23.2 22.05
Bra020591.1-P Field mustard plasma membrane 23.2 22.05
AT4G09120.1 Thale cress plasma membrane 20.99 22.03
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.48 22.02
Bra036631.1-P Field mustard plasma membrane 20.99 21.71
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 20.99 21.71
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 24.86 21.69
CDX99986 Canola plasma membrane 20.72 21.49
PGSC0003DMT400073575 Potato extracellular, plasma membrane 25.69 21.48
Zm00001d018122_P001 Maize vacuole 24.59 21.24
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 19.89 21.24
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 24.59 21.19
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 20.72 21.01
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 22.65 20.97
CDX90713 Canola extracellular, golgi, plasma membrane 19.61 20.94
AT1G35330.1 Thale cress endoplasmic reticulum 18.78 20.73
KRH16794 Soybean plasma membrane 22.38 20.66
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 22.38 20.61
PGSC0003DMT400045807 Potato plasma membrane 20.99 20.11
KRH72412 Soybean nucleus, plasma membrane, plastid 20.99 19.69
Solyc12g087860.1.1 Tomato vacuole 20.17 19.57
CDY12022 Canola plasma membrane 18.78 19.26
Bra028075.1-P Field mustard plasma membrane 18.23 18.7
CDY03116 Canola plasma membrane 18.23 18.7
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 16.85 17.53
Zm00001d039216_P001 Maize endoplasmic reticulum, extracellular, golgi 17.96 16.62
Zm00001d009777_P001 Maize extracellular, golgi, plasma membrane 17.96 15.97
CDY70750 Canola extracellular, mitochondrion, nucleus 13.26 15.84
Zm00001d014612_P001 Maize peroxisome 16.85 15.37
CDY12527 Canola extracellular, plasma membrane, vacuole 9.94 15.13
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 9.94 15.13
CDY05145 Canola plasma membrane 11.88 14.48
CDY27787 Canola extracellular, plasma membrane, vacuole 11.88 14.29
CDY50446 Canola mitochondrion 8.29 12.55
Protein Annotations
EntrezGene:100217255MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10UniProt:B4FM78EMBL:BT038216GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016874InterPro:IPR001841
InterPro:IPR013083ProteinID:ONL94432.1PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF298
SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI00017B6BE3EnsemblPlantsGene:Zm00001d027983
EnsemblPlants:Zm00001d027983_P001EnsemblPlants:Zm00001d027983_T001InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
E3 ubiquitin-protein ligase ATL6
Coordinates
chr1:-:19323604..19324692
Molecular Weight (calculated)
38660.4 Da
IEP (calculated)
7.244
GRAVY (calculated)
-0.349
Length
362 amino acids
Sequence
(BLAST)
001: MDSRHIAPPP AVLFLVLLST AARPSLAQPS NNSTSGHHSR TAGGFTPTTV IVLVALVSAF VVLTLFSIYI NRCAPTRPPP QRPSRPAPAP PDHHHHQASS
101: ATGGGGGGGV LHPERRARAG LDKEAVVSFP TAVYGDVKAR VAGPLECAVC LAAFEDRDEL RVLPACCHVF HPDCIDPWLA GAATCPLCRA DLTAAAPHPP
201: PASSSGSSSE PAVREREQEA RDEERDEEAR LVAAFTPESV MSFGAARPHE FVYRRTQSAM DVPDRHTLRL PEHVMKELAA VRRHRRAASL AVYPDGVERA
301: PGWLASFWRS VPWQRPSRTD SDAVDEHGGS KRVFPIAGAP SERPSGSGDA TDEEKADRGA GA
Best Arabidopsis Sequence Match ( AT1G22500.1 )
(BLAST)
001: MVVMSRVSFY SSFLLLLLEV VVASSEFDDE GRTSFSPTTA IIMIVLVSVF FALGCISVYM RRCLQHALGM DSGGGPGNWL NVRQTTEPGL DASVIETFPT
101: FPYSTVKTLR IGKEALECPV CLNEFEDDET LRLIPQCCHV FHPGCIDAWL RSQTTCPLCR ANLVPVPGES VSSEIPGLAR ETGQNSLRTP IDDNRKRVLT
201: SPDERLIDSV AWTGNQSMPR KSMSTGWKLA ELYSPASSPG QPEENLDRYT LRLPQEIHDQ LVNSSLGKQG SKGQLALPQE RSSVRGFRTG SLGTEKNYFY
301: FERFDQDGRL DRRPFSITPP YHTRSIQSPD EIINASGNYQ DRAGAPKGLL LAIRSPFDRL FTGKKNAGER SYLQSGDASP V
Arabidopsis Description
ATL15E3 ubiquitin-protein ligase ATL15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SK92]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.