Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 96.97 | 95.68 |
| AT3G05200.1 | Thale cress | plasma membrane | 80.81 | 60.3 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 60.61 | 59.41 |
| CDY18787 | Canola | plasma membrane | 74.75 | 57.36 |
| CDY53236 | Canola | plasma membrane | 64.65 | 55.33 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 53.87 | 45.71 |
| CDX99986 | Canola | plasma membrane | 53.2 | 45.27 |
| CDY25038 | Canola | plasma membrane | 54.21 | 43.51 |
| CDY05577 | Canola | plasma membrane | 54.55 | 42.41 |
| CDX86163 | Canola | plasma membrane | 31.99 | 31.67 |
| CDX80653 | Canola | plasma membrane | 31.99 | 31.35 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 31.99 | 31.25 |
| KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 29.97 | 26.49 |
| KRH33975 | Soybean | golgi, plasma membrane, vacuole | 31.99 | 26.46 |
| KRG96857 | Soybean | vacuole | 32.66 | 25.87 |
| KRH68588 | Soybean | plasma membrane | 29.97 | 24.32 |
| Zm00001d005936_P001 | Maize | plasma membrane | 27.95 | 21.12 |
| CDX90377 | Canola | extracellular, golgi | 21.89 | 21.1 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 22.22 | 20.95 |
| VIT_14s0128g00120.t01 | Wine grape | plasma membrane, plastid, vacuole | 29.63 | 20.95 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 27.27 | 20.93 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 26.94 | 20.83 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 24.58 | 20.68 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 26.94 | 20.41 |
| CDY39477 | Canola | extracellular | 21.21 | 20.32 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 19.87 | 20.21 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 26.94 | 20.15 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 23.23 | 20.0 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 26.6 | 19.95 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 23.91 | 19.83 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 26.94 | 19.42 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 25.25 | 19.33 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 22.22 | 19.19 |
| Zm00001d020789_P001 | Maize | plasma membrane | 25.59 | 19.1 |
| GSMUA_Achr10P... | Banana | plasma membrane | 24.58 | 18.81 |
| TraesCS6D01G113000.1 | Wheat | golgi | 25.25 | 18.7 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 19.19 | 18.69 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 22.9 | 18.48 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 24.92 | 18.32 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 24.92 | 18.23 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 22.22 | 17.93 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 23.57 | 17.33 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 18.18 | 17.25 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 18.18 | 17.25 |
| EES18560 | Sorghum | golgi, plasma membrane | 22.22 | 16.79 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 21.55 | 16.58 |
| Zm00001d031261_P001 | Maize | golgi | 20.2 | 15.92 |
| Os08t0484200-01 | Rice | golgi | 21.89 | 15.74 |
| TraesCS7B01G081700.1 | Wheat | golgi | 21.55 | 15.46 |
| TraesCS7D01G178000.1 | Wheat | golgi | 21.21 | 15.44 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 21.89 | 15.44 |
| TraesCS7A01G176700.1 | Wheat | golgi | 21.55 | 15.42 |
| CDY12022 | Canola | plasma membrane | 18.18 | 15.3 |
| GSMUA_AchrUn_... | Banana | plastid | 18.52 | 15.28 |
| CDY03116 | Canola | plasma membrane | 17.85 | 15.01 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 22.22 | 14.93 |
| CDY50446 | Canola | mitochondrion | 11.78 | 14.64 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 16.5 | 14.45 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 11.45 | 14.35 |
| CDY70284 | Canola | plasma membrane | 18.52 | 14.14 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 18.18 | 14.1 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 19.19 | 14.07 |
| CDY05049 | Canola | plasma membrane | 13.8 | 14.04 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 18.86 | 13.93 |
| CDY03651 | Canola | plasma membrane | 18.86 | 13.9 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 19.19 | 13.73 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 16.5 | 13.73 |
| CDX82176 | Canola | extracellular | 16.84 | 13.7 |
| Zm00001d018122_P001 | Maize | vacuole | 19.19 | 13.6 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 10.77 | 13.45 |
| CDX78812 | Canola | plasma membrane | 13.13 | 13.27 |
| CDY44502 | Canola | plasma membrane | 13.13 | 13.27 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 12.79 | 13.24 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 12.79 | 13.24 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 15.82 | 13.24 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 17.85 | 13.09 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 19.19 | 13.04 |
| CDY62007 | Canola | golgi, plasma membrane | 16.5 | 13.03 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.44 | 13.03 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 15.49 | 12.96 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 15.49 | 12.96 |
| CDY03652 | Canola | plasma membrane | 17.17 | 12.88 |
| CDX82179 | Canola | plasma membrane | 15.15 | 12.82 |
| EER92732 | Sorghum | golgi | 15.82 | 12.77 |
| CDY21367 | Canola | golgi, plasma membrane | 16.16 | 12.77 |
| Os03t0188200-01 | Rice | golgi | 15.15 | 12.75 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 17.17 | 12.56 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 17.85 | 12.53 |
| HORVU4Hr1G057610.1 | Barley | plastid | 17.17 | 12.38 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 15.82 | 12.14 |
| CDY01502 | Canola | plasma membrane | 12.12 | 12.12 |
| Zm00001d048230_P001 | Maize | golgi | 15.49 | 12.11 |
| CDY03202 | Canola | plasma membrane | 11.45 | 12.1 |
| TraesCS4D01G200100.1 | Wheat | plastid | 16.84 | 12.08 |
| CDX82175 | Canola | extracellular | 9.43 | 11.97 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 14.48 | 11.88 |
| CDY35174 | Canola | plasma membrane | 11.11 | 11.74 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 15.15 | 11.63 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 21.21 | 11.56 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 15.82 | 11.3 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 16.5 | 11.26 |
| TraesCS4B01G199100.1 | Wheat | plastid | 16.84 | 11.19 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 7.41 | 10.38 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 4.71 | 9.86 |
| CDY05714 | Canola | cytosol | 7.07 | 9.86 |
| CDX75097 | Canola | extracellular | 4.04 | 8.7 |
| CDY48058 | Canola | extracellular | 4.04 | 8.7 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 11.11 | 7.95 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 11.11 | 7.86 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 10.77 | 7.67 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 9.09 | 7.65 |
| CDY13888 | Canola | plasma membrane | 9.43 | 7.57 |
| CDX70126 | Canola | plasma membrane | 10.1 | 7.44 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 10.44 | 7.43 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.1 | 7.35 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 10.1 | 7.33 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 9.09 | 7.28 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 9.09 | 7.05 |
| CDY05713 | Canola | extracellular | 3.37 | 6.8 |
| CDX90435 | Canola | nucleus | 12.12 | 5.86 |
| CDY62419 | Canola | cytosol | 2.69 | 5.33 |
| CDY31686 | Canola | nucleus | 1.35 | 3.81 |
| CDY31685 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY05145 | EnsemblPlantsGene:GSBRNA2T00119942001 | GO:A0A078ET62 | ProteinID:CDY05145 | ProteinID:CDY05145.1 | SEG:seg |
| SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE87E4 | MapMan:35.1 | : | : |
Description
BnaC05g46580D
Coordinates
chrLK031960:+:37304..38452
Molecular Weight (calculated)
32807.1 Da
IEP (calculated)
10.824
GRAVY (calculated)
-0.374
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRSDHAFPL IFLCILSAAE LVAGQGQPDQ RNEVYSYGKI SPAMAVIVVI LIAALFFMGF FSIYFRHYSA LPDAAVSPAG GARLRGQVDK DESVEPDVEL
101: QQVVVSPEPV VIAPVQEQSV TSEIDSRRLP GVPVDLKRAK FSRSHTTGHS VVQPGECTER FTLRLPEDAR KRMMANWKLN RSNSLLVLPR GGSSRRVKPI
201: DRSRAWSDRW LYRKTSSFLW RSRDDGSIKL GGTGSVRPNA VPNSTGDSVR SDRWAILRNA SFLWRNSSVQ GRKDKEGTSV KPPGTGGSTS GSERLPV
101: QQVVVSPEPV VIAPVQEQSV TSEIDSRRLP GVPVDLKRAK FSRSHTTGHS VVQPGECTER FTLRLPEDAR KRMMANWKLN RSNSLLVLPR GGSSRRVKPI
201: DRSRAWSDRW LYRKTSSFLW RSRDDGSIKL GGTGSVRPNA VPNSTGDSVR SDRWAILRNA SFLWRNSSVQ GRKDKEGTSV KPPGTGGSTS GSERLPV
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.