Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90377 | Canola | extracellular, golgi | 96.45 | 97.08 |
| AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 70.97 | 68.11 |
| CDY53236 | Canola | plasma membrane | 36.45 | 32.56 |
| CDY31686 | Canola | nucleus | 10.97 | 32.38 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 14.52 | 31.69 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 38.71 | 31.25 |
| CDX82175 | Canola | extracellular | 23.55 | 31.2 |
| CDX75097 | Canola | extracellular | 13.87 | 31.16 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 39.35 | 31.12 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 39.35 | 30.81 |
| Zm00001d005936_P001 | Maize | plasma membrane | 39.03 | 30.79 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 38.39 | 30.75 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 39.03 | 30.48 |
| CDY18787 | Canola | plasma membrane | 37.74 | 30.23 |
| Zm00001d020789_P001 | Maize | plasma membrane | 38.71 | 30.15 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 40.0 | 30.1 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 33.23 | 29.94 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 29.35 | 29.84 |
| CDY48058 | Canola | extracellular | 13.23 | 29.71 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 33.55 | 29.46 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 33.23 | 29.43 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.71 | 29.28 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 36.45 | 29.27 |
| CDX86163 | Canola | plasma membrane | 28.06 | 29.0 |
| CDX99986 | Canola | plasma membrane | 32.58 | 28.94 |
| CDY25038 | Canola | plasma membrane | 34.52 | 28.92 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 27.1 | 28.77 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 29.03 | 28.75 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 29.03 | 28.57 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 31.61 | 28.41 |
| CDX80653 | Canola | plasma membrane | 27.74 | 28.38 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 21.61 | 28.27 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 28.39 | 28.11 |
| CDY05577 | Canola | plasma membrane | 34.52 | 28.01 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 34.84 | 27.84 |
| GSMUA_AchrUn_... | Banana | plastid | 32.26 | 27.78 |
| TraesCS6D01G113000.1 | Wheat | golgi | 35.81 | 27.68 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 31.94 | 27.65 |
| EES18560 | Sorghum | golgi, plasma membrane | 34.84 | 27.48 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 35.81 | 27.48 |
| CDX82176 | Canola | extracellular | 32.26 | 27.4 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 35.81 | 27.34 |
| CDY05713 | Canola | extracellular | 12.9 | 27.21 |
| Os08t0484200-01 | Rice | golgi | 36.13 | 27.12 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 35.16 | 26.98 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 18.39 | 26.89 |
| CDX78812 | Canola | plasma membrane | 25.48 | 26.87 |
| CDY44502 | Canola | plasma membrane | 25.48 | 26.87 |
| Zm00001d031261_P001 | Maize | golgi | 32.58 | 26.79 |
| CDY03202 | Canola | plasma membrane | 24.19 | 26.69 |
| CDY35174 | Canola | plasma membrane | 24.19 | 26.69 |
| CDY62419 | Canola | cytosol | 12.9 | 26.67 |
| CDY21367 | Canola | golgi, plasma membrane | 32.26 | 26.6 |
| CDY62007 | Canola | golgi, plasma membrane | 32.26 | 26.6 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 31.29 | 26.36 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 24.19 | 26.13 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 24.19 | 26.13 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 30.97 | 26.09 |
| CDX82179 | Canola | plasma membrane | 29.35 | 25.93 |
| CDY70284 | Canola | plasma membrane | 32.26 | 25.71 |
| CDY05049 | Canola | plasma membrane | 24.19 | 25.68 |
| CDY01502 | Canola | plasma membrane | 24.52 | 25.59 |
| CDY03116 | Canola | plasma membrane | 29.03 | 25.5 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 34.52 | 25.42 |
| CDY12022 | Canola | plasma membrane | 28.71 | 25.21 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 29.03 | 25.21 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 33.55 | 25.06 |
| CDY03651 | Canola | plasma membrane | 32.26 | 24.81 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 27.1 | 24.78 |
| Os03t0188200-01 | Rice | golgi | 28.06 | 24.65 |
| CDY03652 | Canola | plasma membrane | 31.29 | 24.49 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 33.23 | 24.35 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 27.74 | 24.23 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 27.74 | 24.23 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 27.74 | 24.23 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.61 | 24.2 |
| EER92732 | Sorghum | golgi | 28.71 | 24.18 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.29 | 24.13 |
| Zm00001d018122_P001 | Maize | vacuole | 32.58 | 24.11 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 33.87 | 24.03 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 34.19 | 23.98 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.29 | 23.95 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 29.68 | 23.77 |
| GSMUA_Achr10P... | Banana | plasma membrane | 29.68 | 23.71 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 30.97 | 23.65 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 27.1 | 23.2 |
| TraesCS7D01G178000.1 | Wheat | golgi | 30.32 | 23.04 |
| TraesCS7B01G081700.1 | Wheat | golgi | 30.65 | 22.95 |
| TraesCS7A01G176700.1 | Wheat | golgi | 30.32 | 22.65 |
| Zm00001d048230_P001 | Maize | golgi | 27.74 | 22.63 |
| TraesCS4D01G200100.1 | Wheat | plastid | 30.0 | 22.46 |
| HORVU4Hr1G057610.1 | Barley | plastid | 29.68 | 22.33 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 27.42 | 22.19 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 20.97 | 21.45 |
| CDY05145 | Canola | plasma membrane | 20.32 | 21.21 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 26.45 | 21.19 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 20.0 | 20.6 |
| TraesCS4B01G199100.1 | Wheat | plastid | 29.35 | 20.36 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 28.06 | 20.0 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 34.84 | 19.82 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 14.52 | 18.91 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 24.84 | 18.51 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 14.19 | 18.49 |
| CDY13888 | Canola | plasma membrane | 21.29 | 17.84 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 21.29 | 17.79 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 20.0 | 17.56 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.97 | 16.97 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 22.58 | 16.79 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 22.58 | 16.79 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 22.26 | 16.63 |
| CDX70126 | Canola | plasma membrane | 21.61 | 16.63 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 22.26 | 16.43 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 21.61 | 16.42 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 21.61 | 16.38 |
| CDY50446 | Canola | mitochondrion | 11.94 | 15.48 |
| CDY31685 | Canola | cytosol | 0.97 | 13.64 |
| CDX90435 | Canola | nucleus | 23.55 | 11.89 |
| CDY05714 | Canola | cytosol | 4.52 | 6.57 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | GO:A0A078HNP1 | UniProt:A0A078HNP1 | EnsemblPlants:CDY39477 | ProteinID:CDY39477 |
| ProteinID:CDY39477.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00067973001 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | SMART:SM00184 |
| SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE78A5 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g60870DBnaC03g60870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNP1]
Coordinates
chrLK032448:+:259008..259940
Molecular Weight (calculated)
34392.8 Da
IEP (calculated)
8.765
GRAVY (calculated)
-0.330
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVQGFISH RWIIFQLIIV LHVANAQSLP PPSQDELQPG HAPSKTTVFA VLVTAFFFFG LLSVYIRHCT RAMPGHSNTN SRRRAFDGCS RRGGLEDAVV
101: ESFPVFAYSS VKESKIGAGD LECAICLNEL EDRETVRLLP VCNHLFHVDC IDAWLYSHAT CPVCRFNLTA KPVKTGAEDR APVSDHVVID IRGDSEADEE
201: EEKSRHRRPS SEIVGKFPRS NSTGHSMGRL SGGTERFTLR LPEDVRRRIM AAKGRRLKRT RSFDADLMDS GYVVGSGGKS DRVSWADRWG LFVSKSNSGS
301: VRSPNGDSLT
101: ESFPVFAYSS VKESKIGAGD LECAICLNEL EDRETVRLLP VCNHLFHVDC IDAWLYSHAT CPVCRFNLTA KPVKTGAEDR APVSDHVVID IRGDSEADEE
201: EEKSRHRRPS SEIVGKFPRS NSTGHSMGRL SGGTERFTLR LPEDVRRRIM AAKGRRLKRT RSFDADLMDS GYVVGSGGKS DRVSWADRWG LFVSKSNSGS
301: VRSPNGDSLT
001: MMTRVECFNP HRWIILHVAI IIQSKANAQS FSPSPPDLQT GHTPSKTTVF AVLVTLFFLT GLLSVYIRHC ARSNPDSSTR YFRNRANDGS SRRGGLDNAV
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK
Arabidopsis Description
ATL32RING-H2 finger protein ATL32 [Source:UniProtKB/Swiss-Prot;Acc:Q8W571]
SUBAcon: [mitochondrion,golgi,plastid,extracellular]
SUBAcon: [mitochondrion,golgi,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.