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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 98.1 98.1
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 97.83 97.83
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 76.36 74.34
CDX90713 Canola extracellular, golgi, plasma membrane 36.68 39.82
CDY03116 Canola plasma membrane 37.23 38.81
CDY05049 Canola plasma membrane 30.71 38.7
CDY12022 Canola plasma membrane 36.96 38.53
CDX75097 Canola extracellular 13.86 36.96
CDY48058 Canola extracellular 13.32 35.51
CDX82175 Canola extracellular 21.47 33.76
CDY53236 Canola plasma membrane 31.79 33.72
GSMUA_Achr6P30500_001 Banana plasma membrane 26.09 32.88
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 30.43 32.46
CDX82176 Canola extracellular 31.52 31.78
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 30.16 31.71
CDX99986 Canola plasma membrane 29.89 31.52
GSMUA_Achr3P20400_001 Banana mitochondrion 29.08 31.1
CDX80653 Canola plasma membrane 25.54 31.02
CDX84270 Canola cytosol, plastid, vacuole 26.36 30.99
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 26.36 30.99
CDY39477 Canola extracellular 26.09 30.97
GSMUA_AchrUn_... Banana golgi, plasma membrane 29.62 30.88
CDX90377 Canola extracellular, golgi 25.82 30.84
CDY18787 Canola plasma membrane 32.34 30.75
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 25.27 30.59
CDY21367 Canola golgi, plasma membrane 31.25 30.59
CDY62007 Canola golgi, plasma membrane 31.25 30.59
Os09t0468300-00 Rice golgi, plasma membrane 32.07 30.49
CDY31686 Canola nucleus 8.7 30.48
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 32.34 30.36
CDY70284 Canola plasma membrane 31.79 30.08
CDY25038 Canola plasma membrane 30.16 30.0
CDX82179 Canola plasma membrane 28.53 29.91
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 24.73 29.84
Zm00001d005936_P001 Maize plasma membrane 31.79 29.77
HORVU5Hr1G069980.1 Barley plasma membrane 30.98 29.69
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 11.41 29.58
TraesCS5B01G245800.1 Wheat plasma membrane 31.79 29.55
CDX86163 Canola plasma membrane 23.91 29.33
CDY03652 Canola plasma membrane 31.52 29.29
TraesCS5A01G248100.1 Wheat plasma membrane 31.52 29.22
CDY03651 Canola plasma membrane 31.79 29.03
CDY05577 Canola plasma membrane 29.89 28.8
GSMUA_Achr10P... Banana plasma membrane 29.89 28.35
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.3 28.3
EER99041 Sorghum endoplasmic reticulum, plasma membrane 31.25 27.91
Zm00001d020789_P001 Maize plasma membrane 30.16 27.89
TraesCS3D01G495500.1 Wheat vacuole 29.08 27.72
TraesCS3B01G549900.1 Wheat vacuole 23.37 27.3
Zm00001d031261_P001 Maize golgi 27.17 26.53
EES18560 Sorghum golgi, plasma membrane 28.26 26.46
GSMUA_AchrUn_... Banana plastid 25.82 26.39
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 20.38 26.13
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 20.38 26.13
EER92732 Sorghum golgi 26.09 26.09
HORVU4Hr1G078260.1 Barley plasma membrane 25.27 26.05
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 27.45 26.03
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 28.53 25.99
TraesCS6D01G113000.1 Wheat golgi 27.99 25.69
Os08t0484200-01 Rice golgi 28.8 25.67
TraesCS4A01G404600.1 Wheat plasma membrane 24.73 25.63
TraesCS4B01G304400.1 Wheat plasma membrane 24.73 25.63
Os03t0188200-01 Rice golgi 24.46 25.5
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 24.73 25.42
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.72 25.37
HORVU4Hr1G080840.1 Barley cytosol 16.3 25.32
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 27.72 25.25
TraesCS4D01G302600.1 Wheat plasma membrane 24.18 25.07
CDY35174 Canola plasma membrane 19.02 24.91
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 27.45 24.88
CDX78812 Canola plasma membrane 19.84 24.83
CDY44502 Canola plasma membrane 19.84 24.83
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.17 24.69
HORVU6Hr1G077610.1 Barley plasma membrane 27.17 24.63
CDY05713 Canola extracellular 9.78 24.49
Zm00001d027983_P001 Maize plasma membrane, plastid 23.91 24.31
Zm00001d048230_P001 Maize golgi 25.0 24.21
CDY03202 Canola plasma membrane 18.48 24.2
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.63 24.2
HORVU4Hr1G057610.1 Barley plastid 26.63 23.79
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 27.17 23.75
CDY01502 Canola plasma membrane 19.02 23.57
CDY12527 Canola extracellular, plasma membrane, vacuole 15.22 23.53
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 26.36 23.37
TraesCS4A01G104900.1 Wheat mitochondrion 24.46 23.26
Os03t0391100-00 Rice endoplasmic reticulum, golgi 27.45 23.22
TraesCS7B01G081700.1 Wheat golgi 26.09 23.19
OQU85775 Sorghum golgi, plasma membrane, vacuole 26.63 23.17
Zm00001d018122_P001 Maize vacuole 26.36 23.15
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 27.72 23.08
TraesCS7D01G178000.1 Wheat golgi 25.54 23.04
CDY05145 Canola plasma membrane 18.48 22.9
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 27.17 22.88
CDY70750 Canola extracellular, mitochondrion, nucleus 18.75 22.77
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 14.67 22.69
CDY62419 Canola cytosol 9.24 22.67
TraesCS7A01G176700.1 Wheat golgi 25.54 22.65
CDY27787 Canola extracellular, plasma membrane, vacuole 18.48 22.59
TraesCS4D01G200100.1 Wheat plastid 25.27 22.46
Zm00001d029395_P001 Maize plasma membrane, plastid 22.55 21.67
TraesCS4B01G199100.1 Wheat plastid 25.27 20.81
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 21.47 20.41
CDY50446 Canola mitochondrion 13.04 20.08
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 27.45 18.53
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 20.11 17.79
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 17.66 17.52
CDY13888 Canola plasma membrane 17.12 17.03
CDX70126 Canola plasma membrane 17.66 16.13
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 16.58 15.93
CDX98867 Canola endoplasmic reticulum, golgi 15.22 15.86
CDY06859 Canola endoplasmic reticulum, plasma membrane 17.66 15.59
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 17.12 15.44
CDY66475 Canola endoplasmic reticulum, plasma membrane 17.12 15.4
CDY35230 Canola endoplasmic reticulum, plasma membrane 17.39 15.35
CDY50930 Canola endoplasmic reticulum, plasma membrane 16.85 14.76
CDX92900 Canola endoplasmic reticulum, plasma membrane 16.3 14.46
CDX90435 Canola nucleus 19.02 11.4
CDY05714 Canola cytosol 5.16 8.92
CDY31685 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10GO:A0A078H2C8UniProt:A0A078H2C8EnsemblPlants:CDY31657ProteinID:CDY31657
ProteinID:CDY31657.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00050266001InterPro:IPR001841
InterPro:IPR013083PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF414SMART:SM00184
SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EEB5A1InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
BnaA05g08900DBnaA05g08900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2C8]
Coordinates
chrLK032277:-:170550..171656
Molecular Weight (calculated)
40218.8 Da
IEP (calculated)
8.813
GRAVY (calculated)
-0.165
Length
368 amino acids
Sequence
(BLAST)
001: MAIIYNRWIP RSGSLLLLLL LLHSLPYGSG QPTPPVPQTR ASDPVVIVIT VLFFVIFSMV FGSIFCRRSS VYSRPSVFGL TDADAAVGVV RIRRSAARGL
101: APEVIESFPT FIYSDVKAVR IGKGGVECAV CLCEFEDEET LRLMPPCCHV FHADCVDVWL SERSTCPLCR ADLVQKQGDG GSDLSSDPGT VSSGSDPERG
201: VLEASDRHLL DGVTWTNSNN ITPRSKSTGL ASWSITGLLF PRSHSTGHSL VQPVGDLDRF TLRLPDDVHR QLMKTRTIRN VTLPQARSSR SGYRSGSVGS
301: GTGGVFSYGR KDHNHNRRLH SLSFSFSFRS GSVRSTFGGD TVAPPKNFPA ATESGERSFE RLRPDERV
Best Arabidopsis Sequence Match ( AT2G35000.1 )
(BLAST)
001: MAILDTKSSR WIPHNLLFLL LLLLLQSVPY GFGQTQTTPP GTTKTKPNDP VVVVITVLFL VIFFMVFGSI FCRRSNAQFS RSSIFRSTDA DAESQVVRIR
101: RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
201: GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
301: RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF SGDAPKNLPT SIEAGERSFE RLRPDERV
Arabidopsis Description
ATL9E3 ubiquitin-protein ligase ATL9 [Source:UniProtKB/Swiss-Prot;Acc:O64763]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.