Factsheet for Zm00001d018122_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85775	Sorghum	golgi, plasma membrane, vacuole	87.83	87.0
Zm00001d052189_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	84.01	84.82
TraesCS6A01G315600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.23	60.25
HORVU6Hr1G077610.1	Barley	plasma membrane	58.0	59.85
TraesCS6D01G294800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.76	59.75
TraesCS6B01G346000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.28	59.7
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	59.9	57.44
Zm00001d037192_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	46.3	46.08
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	30.55	38.1
Zm00001d020789_P001	Maize	plasma membrane	36.04	37.94
Zm00001d005936_P001	Maize	plasma membrane	35.56	37.91
KRH33975	Soybean	golgi, plasma membrane, vacuole	31.5	36.77
AT4G09100.1	Thale cress	extracellular	10.98	34.85
Zm00001d031261_P001	Maize	golgi	30.79	34.22
Bra010641.1-P	Field mustard	extracellular, golgi	24.58	33.44
CDX90377	Canola	extracellular, golgi	24.58	33.44
KRG96857	Soybean	vacuole	29.36	32.8
CDY39477	Canola	extracellular	24.11	32.58
Bra036631.1-P	Field mustard	plasma membrane	26.97	32.29
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.73	32.0
Zm00001d003499_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	29.59	31.96
CDX99986	Canola	plasma membrane	26.49	31.81
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	25.06	31.44
KRH68588	Soybean	plasma membrane	27.45	31.42
CDY53236	Canola	plasma membrane	26.01	31.41
CDY25038	Canola	plasma membrane	27.68	31.35
KRH72413	Soybean	cytosol, golgi, vacuole	27.68	31.02
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	27.21	30.98
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.92	30.87
Bra038386.1-P	Field mustard	extracellular	10.02	30.43
CDX75097	Canola	extracellular	10.02	30.43
CDY48058	Canola	extracellular	10.02	30.43
CDY05577	Canola	plasma membrane	27.68	30.37
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	24.58	30.29
Bra009962.1-P	Field mustard	mitochondrion, plastid	20.29	29.72
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	28.16	29.65
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	28.16	29.65
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	28.16	29.65
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	21.48	29.61
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.48	29.61
CDX82175	Canola	extracellular	16.47	29.49
Bra020591.1-P	Field mustard	plasma membrane	26.73	29.4
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	29.36	29.29
CDY18787	Canola	plasma membrane	26.97	29.2
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	22.43	29.1
CDX86163	Canola	plasma membrane	20.76	29.0
AT1G35330.1	Thale cress	endoplasmic reticulum	22.67	28.96
Bra040642.1-P	Field mustard	plasma membrane	26.49	28.76
CDX80653	Canola	plasma membrane	20.53	28.38
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	26.01	28.24
AT3G05200.1	Thale cress	plasma membrane	26.73	28.14
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.01	27.88
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	23.87	27.86
CDY70284	Canola	plasma membrane	25.54	27.51
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	22.2	27.43
CDY05049	Canola	plasma membrane	19.09	27.4
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	28.16	27.25
CDX90713	Canola	extracellular, golgi, plasma membrane	21.96	27.14
CDY62007	Canola	golgi, plasma membrane	24.34	27.13
Bra008016.1-P	Field mustard	plasma membrane	26.01	27.05
CDY03651	Canola	plasma membrane	26.01	27.05
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	25.3	26.97
AT4G09120.1	Thale cress	plasma membrane	22.2	26.96
AT2G34990.2	Thale cress	plasma membrane	20.76	26.85
CDX84270	Canola	cytosol, plastid, vacuole	20.05	26.84
Zm00001d016901_P001	Maize	vacuole	22.2	26.8
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	22.67	26.61
CDY31657	Canola	extracellular, plasma membrane, plastid	23.15	26.36
Bra040855.1-P	Field mustard	golgi, plasma membrane	23.63	26.33
CDY21367	Canola	golgi, plasma membrane	23.63	26.33
KRH16794	Soybean	plasma membrane	24.58	26.28
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	22.91	26.09
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	22.91	26.09
AT1G72200.1	Thale cress	plasma membrane	25.06	25.99
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	19.33	25.88
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	19.33	25.88
CDY12022	Canola	plasma membrane	21.72	25.78
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	23.15	25.66
KRH72412	Soybean	nucleus, plasma membrane, plastid	23.63	25.65
CDX82179	Canola	plasma membrane	21.48	25.64
Zm00001d048230_P001	Maize	golgi	23.15	25.53
CDY03116	Canola	plasma membrane	21.48	25.5
Solyc12g087860.1.1	Tomato	vacuole	22.67	25.47
PGSC0003DMT400045807	Potato	plasma membrane	22.91	25.4
Bra012330.1-P	Field mustard	golgi, plasma membrane	20.76	25.29
Bra028075.1-P	Field mustard	plasma membrane	21.24	25.21
CDX82176	Canola	extracellular	21.96	25.21
Zm00001d027983_P001	Maize	plasma membrane, plastid	21.24	24.59
AT1G22500.1	Thale cress	plasma membrane	22.2	24.41
Bra008015.1-P	Field mustard	plasma membrane	22.91	24.24
CDY03652	Canola	plasma membrane	22.91	24.24
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	17.42	24.17
Zm00001d026494_P001	Maize	plastid	11.46	23.65
Zm00001d029395_P001	Maize	plasma membrane, plastid	21.0	22.98
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	18.85	22.7
CDY70750	Canola	extracellular, mitochondrion, nucleus	16.23	22.44
Zm00001d030038_P001	Maize	plastid	12.41	22.41
CDY12527	Canola	extracellular, plasma membrane, vacuole	10.98	19.33
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.98	19.33
CDY27787	Canola	extracellular, plasma membrane, vacuole	13.84	19.27
CDY05145	Canola	plasma membrane	13.6	19.19
CDY50446	Canola	mitochondrion	10.02	17.57
Zm00001d014612_P001	Maize	peroxisome	15.51	16.37
Zm00001d039216_P001	Maize	endoplasmic reticulum, extracellular, golgi	14.8	15.86
Zm00001d009777_P001	Maize	extracellular, golgi, plasma membrane	14.32	14.74

Protein Annotations

EntrezGene:103627767	MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	UniProt:A0A1D6HKX5	ProteinID:AQK75076.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016874	InterPro:IPR001841
InterPro:IPR013083	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF263	SMART:SM00184
SUPFAM:SSF57850	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000220FC23	EnsemblPlantsGene:Zm00001d018122	EnsemblPlants:Zm00001d018122_P001
EnsemblPlants:Zm00001d018122_T001	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

E3 ubiquitin-protein ligase ATL6

Coordinates

chr5:+:214720422..214721681

Molecular Weight (calculated)

44827.0 Da

IEP (calculated)

9.390

GRAVY (calculated)

-0.289

Length

419 amino acids

Sequence
(BLAST)

001: MARHGQALLA ALLVSAVGAA SAQPSYDDGG QGQVSTAMIA LLVAVIAVFV FIASFTVYLR HCTGSAATSD DYDRARAVPN FDAFISRSRR QRRPRGLDAE
101: VVEAFPTMKY AEAKALRVGK GGALECAVCL SEFEDEERLR LLPKCSHAFH PECIGEWLAS HVTCPVCRCN LDPNKDTSSD EQRPDSFPPI PVASSISSET
201: AVSSGHGPLP VAVVIDVITE EEEEARRQEA LELQQIGTQR RAMRSRSGRK PVPTQLARSH STGHSLAVRL DRDLERFTLR LPEHVRREMV AAGEQSMRLR
301: RGRRAGEGSS RGGRSAPLGR ASRWQSLLAG TFSGKLSFFS ASRITVSSAE LGEVSSSSST RARGKRVAAV DAADALASAK GSVRLDRIGG GGVSGAASRS
401: REVAAAADEE KSATQQVRT

Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)

001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV

Arabidopsis Description

ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.