Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05577 Canola plasma membrane 96.85 96.6
CDY25038 Canola plasma membrane 92.91 95.68
Bra036631.1-P Field mustard plasma membrane 70.6 76.86
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 72.97 75.54
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 52.76 66.12
Bra009962.1-P Field mustard mitochondrion, plastid 47.24 62.94
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 60.63 59.84
Bra040642.1-P Field mustard plasma membrane 59.84 59.07
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 49.61 54.31
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 34.91 39.58
KRH33975 Soybean golgi, plasma membrane, vacuole 37.27 39.55
KRG96857 Soybean vacuole 36.48 37.07
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 29.4 36.72
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 32.28 35.65
KRH68588 Soybean plasma membrane 34.12 35.52
GSMUA_AchrUn_... Banana golgi, plasma membrane 32.81 35.41
Bra010641.1-P Field mustard extracellular, golgi 28.08 34.74
GSMUA_Achr10P... Banana plasma membrane 35.17 34.54
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 32.28 34.36
GSMUA_Achr6P30500_001 Banana plasma membrane 26.25 34.25
Zm00001d005936_P001 Maize plasma membrane 35.17 34.1
GSMUA_Achr3P20400_001 Banana mitochondrion 30.71 34.01
Os09t0468300-00 Rice golgi, plasma membrane 34.12 33.59
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 34.38 33.42
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 34.91 33.42
PGSC0003DMT400073575 Potato extracellular, plasma membrane 37.8 33.26
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 34.65 33.17
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 36.48 33.1
HORVU5Hr1G069980.1 Barley plasma membrane 33.33 33.07
TraesCS5B01G245800.1 Wheat plasma membrane 34.12 32.83
TraesCS5A01G248100.1 Wheat plasma membrane 34.12 32.75
Bra038386.1-P Field mustard extracellular 11.81 32.61
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 33.07 32.47
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 12.07 32.39
GSMUA_AchrUn_... Banana plastid 30.45 32.22
Zm00001d020789_P001 Maize plasma membrane 33.33 31.91
EER99041 Sorghum endoplasmic reticulum, plasma membrane 34.38 31.8
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.8 30.19
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 28.35 30.08
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 26.51 29.79
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 28.61 29.62
TraesCS3D01G495500.1 Wheat vacuole 29.4 29.02
Bra012330.1-P Field mustard golgi, plasma membrane 25.98 28.78
Bra040855.1-P Field mustard golgi, plasma membrane 28.35 28.72
TraesCS3B01G549900.1 Wheat vacuole 23.36 28.25
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 29.92 28.22
TraesCS6D01G113000.1 Wheat golgi 29.66 28.18
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 20.73 28.11
Os08t0484200-01 Rice golgi 30.45 28.09
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 29.66 27.83
Bra008016.1-P Field mustard plasma membrane 29.4 27.79
Bra028075.1-P Field mustard plasma membrane 25.72 27.76
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 29.13 27.48
Os03t0188200-01 Rice golgi 25.2 27.2
Bra025008.1-P Field mustard plastid 20.47 27.18
HORVU4Hr1G078260.1 Barley plasma membrane 25.46 27.17
HORVU4Hr1G080840.1 Barley cytosol 16.8 27.0
EES18560 Sorghum golgi, plasma membrane 27.82 26.97
Bra013268.1-P Field mustard plasma membrane 20.73 26.87
TraesCS4A01G404600.1 Wheat plasma membrane 24.93 26.76
Zm00001d018122_P001 Maize vacuole 29.4 26.73
Bra008015.1-P Field mustard plasma membrane 27.56 26.52
Zm00001d031261_P001 Maize golgi 25.98 26.26
Bra005375.1-P Field mustard cytosol, nucleus, plastid 21.52 26.2
TraesCS4D01G302600.1 Wheat plasma membrane 24.41 26.2
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.82 26.17
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.56 26.12
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 28.35 26.02
TraesCS4B01G304400.1 Wheat plasma membrane 24.15 25.92
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 28.61 25.89
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.77 25.19
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 28.87 25.17
TraesCS7B01G081700.1 Wheat golgi 27.3 25.12
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 29.13 25.11
TraesCS4A01G104900.1 Wheat mitochondrion 25.46 25.06
OQU85775 Sorghum golgi, plasma membrane, vacuole 27.82 25.06
TraesCS7D01G178000.1 Wheat golgi 26.77 25.0
HORVU6Hr1G077610.1 Barley plasma membrane 26.51 24.88
TraesCS7A01G176700.1 Wheat golgi 26.77 24.58
EER92732 Sorghum golgi 23.36 24.18
Zm00001d048230_P001 Maize golgi 23.88 23.95
TraesCS4D01G200100.1 Wheat plastid 25.98 23.91
HORVU4Hr1G057610.1 Barley plastid 25.72 23.79
Zm00001d029395_P001 Maize plasma membrane, plastid 23.36 23.24
Zm00001d027983_P001 Maize plasma membrane, plastid 22.05 23.2
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 23.36 23.0
Os03t0391100-00 Rice endoplasmic reticulum, golgi 25.2 22.07
TraesCS4B01G199100.1 Wheat plastid 25.46 21.7
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 22.83 20.91
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 29.4 20.55
Bra005343.1-P Field mustard plastid 14.96 20.43
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 17.85 16.83
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 14.17 16.07
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 17.59 15.95
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 17.32 15.83
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 17.06 15.48
Bra012630.1-P Field mustard nucleus 20.21 12.44
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10EnsemblPlantsGene:Bra020591EnsemblPlants:Bra020591.1EnsemblPlants:Bra020591.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0004842GO:GO:0005575GO:GO:0006464GO:GO:0006950GO:GO:0007154
GO:GO:0008150GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0009719GO:GO:0009737
GO:GO:0009814GO:GO:0009816GO:GO:0009987GO:GO:0009991GO:GO:0010200GO:GO:0016020
GO:GO:0016021GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0043562InterPro:IPR001841
InterPro:IPR013083UniProt:M4DVP7PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF414
SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI00025468E6InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
AT5G27420 (E=1e-137) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA02:+:24400582..24401727
Molecular Weight (calculated)
41778.1 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.238
Length
381 amino acids
Sequence
(BLAST)
001: MKSFFDGGPN RKQPALLAVV LLLLLTMSEL ASGQPSQSDP NNPYDYGGRL SPVMAVVVVV VIALLFFMGF FPIYPRHCPS ASDGGSVNPR VGARRVINST
101: VARGLDAEML ETFPTFVYSE VKTQKIGKGA LECAICLNEF EDDETLRLLP KCDHVFHPHC IDAWLKSHVT CPVCRTNLAE QEQTTAGPVE PEVVTEIDLE
201: SQQTVVPEPA VEGGSVARVK LPRSHTTGHS VVLPGECTER FTLRLPEELR KKIMANWKMN RSNSLLVRSR SGKPVERSRA RSDRWLFIKT PSFLWRSRDD
301: GSIRLGGNGS VKANAVTSPT GDSVRAEGWN FLRNPSFMWR GTPVPSPRVE VNIKDGEGTS SVQSQHTGTV GLSSGSVRLP V
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.