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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12022 Canola plasma membrane 97.73 97.73
CDY03116 Canola plasma membrane 94.62 94.62
AT1G35330.1 Thale cress endoplasmic reticulum 67.99 73.17
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 46.18 48.08
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 37.96 36.41
Bra038386.1-P Field mustard extracellular 11.61 29.71
Bra009962.1-P Field mustard mitochondrion, plastid 23.51 29.02
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 28.05 28.7
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 24.65 28.62
Bra010641.1-P Field mustard extracellular, golgi 24.93 28.57
GSMUA_Achr6P30500_001 Banana plasma membrane 23.51 28.42
Bra036631.1-P Field mustard plasma membrane 27.48 27.71
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 23.8 27.54
HORVU4Hr1G080840.1 Barley cytosol 18.41 27.43
GSMUA_Achr3P20400_001 Banana mitochondrion 25.5 26.16
Bra012330.1-P Field mustard golgi, plasma membrane 25.5 26.16
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.33 25.91
Bra005375.1-P Field mustard cytosol, nucleus, plastid 22.95 25.88
Bra020591.1-P Field mustard plasma membrane 27.76 25.72
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 26.06 25.7
Bra040642.1-P Field mustard plasma membrane 28.05 25.65
Bra040855.1-P Field mustard golgi, plasma membrane 26.91 25.27
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 27.76 25.26
GSMUA_AchrUn_... Banana golgi, plasma membrane 25.21 25.21
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 25.5 25.07
GSMUA_Achr10P... Banana plasma membrane 27.48 25.0
Zm00001d005936_P001 Maize plasma membrane 27.76 24.94
HORVU5Hr1G069980.1 Barley plasma membrane 26.91 24.74
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 14.73 24.53
TraesCS5B01G245800.1 Wheat plasma membrane 27.48 24.49
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 27.2 24.49
TraesCS3D01G495500.1 Wheat vacuole 26.63 24.35
Os09t0468300-00 Rice golgi, plasma membrane 26.63 24.29
Zm00001d020789_P001 Maize plasma membrane 27.2 24.12
Bra008016.1-P Field mustard plasma membrane 27.48 24.07
EER99041 Sorghum endoplasmic reticulum, plasma membrane 28.05 24.03
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 9.63 23.94
TraesCS5A01G248100.1 Wheat plasma membrane 26.91 23.93
GSMUA_AchrUn_... Banana plastid 24.36 23.89
Bra008015.1-P Field mustard plasma membrane 26.06 23.23
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 26.35 23.02
TraesCS6D01G113000.1 Wheat golgi 26.06 22.94
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 26.06 22.77
Bra025008.1-P Field mustard plastid 18.41 22.65
TraesCS3B01G549900.1 Wheat vacuole 20.11 22.54
Bra013268.1-P Field mustard plasma membrane 18.7 22.45
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 25.78 22.41
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 26.63 22.33
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 17.56 22.06
TraesCS7D01G178000.1 Wheat golgi 25.5 22.06
TraesCS7B01G081700.1 Wheat golgi 25.78 21.98
TraesCS7A01G176700.1 Wheat golgi 25.78 21.93
EES18560 Sorghum golgi, plasma membrane 24.36 21.88
Os08t0484200-01 Rice golgi 25.21 21.55
Zm00001d031261_P001 Maize golgi 22.95 21.49
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 25.21 21.45
Zm00001d018122_P001 Maize vacuole 25.21 21.24
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 26.35 21.04
OQU85775 Sorghum golgi, plasma membrane, vacuole 24.93 20.8
Os03t0188200-01 Rice golgi 20.68 20.68
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 24.36 19.68
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 22.38 19.65
HORVU4Hr1G078260.1 Barley plasma membrane 19.83 19.61
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 18.98 19.25
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 21.81 19.01
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 21.81 19.01
HORVU6Hr1G077610.1 Barley plasma membrane 21.81 18.97
TraesCS4A01G404600.1 Wheat plasma membrane 18.98 18.87
Bra005343.1-P Field mustard plastid 14.73 18.64
TraesCS4A01G104900.1 Wheat mitochondrion 20.4 18.6
TraesCS4B01G304400.1 Wheat plasma membrane 18.7 18.59
TraesCS4D01G302600.1 Wheat plasma membrane 18.7 18.59
HORVU4Hr1G057610.1 Barley plastid 21.53 18.45
Zm00001d027983_P001 Maize plasma membrane, plastid 18.7 18.23
EER92732 Sorghum golgi 18.98 18.21
Zm00001d048230_P001 Maize golgi 19.55 18.16
TraesCS4D01G200100.1 Wheat plastid 21.25 18.12
Zm00001d029395_P001 Maize plasma membrane, plastid 19.26 17.75
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 19.26 17.57
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 26.91 17.43
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 20.4 17.31
Os03t0391100-00 Rice endoplasmic reticulum, golgi 20.96 17.01
TraesCS4B01G199100.1 Wheat plastid 20.96 16.55
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 17.56 14.87
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 17.56 14.76
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 16.43 14.36
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 13.6 14.29
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 17.0 14.29
Bra012630.1-P Field mustard nucleus 17.85 10.18
Protein Annotations
EnsemblPlants:Bra028075.1EnsemblPlants:Bra028075.1-PEnsemblPlantsGene:Bra028075Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI000254286DUniProt:M4EH10MapMan:19.2.2.1.5.3.3:
Description
AT1G35330 (E=2e-112) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA09:+:18594989..18596050
Molecular Weight (calculated)
39840.0 Da
IEP (calculated)
10.145
GRAVY (calculated)
-0.442
Length
353 amino acids
Sequence
(BLAST)
001: MTNRKSIILP RYYVIYLVLL VFQVTGQPQP GAIGPYGRQI RPNQVPAVII GMLIFSLLFS MIACCVCYKY RSMSPPGTNS DTDEEGRGGV PWTRRTSRGV
101: EKDVIMSFPS FLYSQVKGLK LGKGGVECAI CLNEFDDGEE LRLMPACSHA FHAPCIDVWL SSRSTCPVCR DNLAPKPGNN IYPFIRPRTN QDMDLEMANA
201: RRSVLESPDV RLLDVLPRSN NNRANRLPRP RSTGSSNWQI TEMLFPRSHS TGHSLIPLRE NLDRFTLQLP QELRRHLSQR TLPQARSSRQ GYRSGSVGSH
301: RRGIPHGRGY NHRTISLSFS FSFQSASLQL EKGKDKEFGE GSFERLRPEI PLS
Best Arabidopsis Sequence Match ( AT1G35330.1 )
(BLAST)
001: MMTIGKSPIL LHHHVIFLLL LVLQVSGQHQ PRTTAPPYIA QRPNQVPAVI IAMLMFTLLF SMLACCVCYK YTNTSPHGTS SDTEEGGHGE VAFTRRTSRG
101: LGKDVINSFP SFLYSQVKGL KIGKGGVECA ICLNEFEDEE TLRLMPPCSH AFHASCIDVW LSSRSTCPVC RASLPPKPGS DQNSLYPFIR PHDNQDMDLE
201: NVTARRSVLE SPDVRLLDRL SWSNNTGANT PPRSRSTGLS NWRITELLFP RSHSTGHSLV PRVENLDRFT LQLPEEVRRQ LSHMKTLPQA RSSREGYRSG
301: SVGSERRGKG KEKEFGEGSF DRLKAEMV
Arabidopsis Description
RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.