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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90713 Canola extracellular, golgi, plasma membrane 97.05 97.05
CDY05049 Canola plasma membrane 80.53 93.49
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 71.98 68.35
AT4G09120.1 Thale cress plasma membrane 67.55 66.38
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 57.23 64.24
Bra028075.1-P Field mustard plasma membrane 48.08 46.18
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 39.23 36.14
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.73 30.92
Bra038386.1-P Field mustard extracellular 12.39 30.43
Bra009962.1-P Field mustard mitochondrion, plastid 25.37 30.07
Bra036631.1-P Field mustard plasma membrane 29.79 28.86
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 28.61 28.12
Bra010641.1-P Field mustard extracellular, golgi 25.07 27.6
GSMUA_Achr6P30500_001 Banana plasma membrane 23.6 27.4
Bra040855.1-P Field mustard golgi, plasma membrane 30.38 27.39
Bra040642.1-P Field mustard plasma membrane 30.97 27.2
Bra005375.1-P Field mustard cytosol, nucleus, plastid 25.07 27.16
Bra012330.1-P Field mustard golgi, plasma membrane 27.43 27.03
GSMUA_AchrUn_... Banana golgi, plasma membrane 28.02 26.91
Bra020591.1-P Field mustard plasma membrane 29.79 26.51
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 28.02 26.46
Bra008016.1-P Field mustard plasma membrane 31.27 26.3
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 23.6 26.23
GSMUA_Achr3P20400_001 Banana mitochondrion 26.55 26.16
Os09t0468300-00 Rice golgi, plasma membrane 29.79 26.1
Zm00001d005936_P001 Maize plasma membrane 30.09 25.95
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 29.5 25.51
EER99041 Sorghum endoplasmic reticulum, plasma membrane 30.97 25.49
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 26.84 25.42
TraesCS5A01G248100.1 Wheat plasma membrane 29.5 25.19
HORVU5Hr1G069980.1 Barley plasma membrane 28.32 25.0
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 28.61 25.0
TraesCS5B01G245800.1 Wheat plasma membrane 29.2 25.0
Bra008015.1-P Field mustard plasma membrane 29.2 25.0
HORVU4Hr1G080840.1 Barley cytosol 17.4 24.89
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.32 24.87
Zm00001d020789_P001 Maize plasma membrane 28.91 24.62
TraesCS3D01G495500.1 Wheat vacuole 27.14 23.83
GSMUA_Achr10P... Banana plasma membrane 27.14 23.71
Bra025008.1-P Field mustard plastid 19.76 23.34
GSMUA_AchrUn_... Banana plastid 24.78 23.33
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 9.73 23.24
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 28.32 23.13
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 27.43 23.02
TraesCS6D01G113000.1 Wheat golgi 27.14 22.94
Bra013268.1-P Field mustard plasma membrane 19.76 22.79
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 27.14 22.77
TraesCS3B01G549900.1 Wheat vacuole 20.94 22.54
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 18.58 22.42
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 26.84 22.41
Os03t0188200-01 Rice golgi 23.3 22.38
Zm00001d031261_P001 Maize golgi 24.78 22.28
OQU85775 Sorghum golgi, plasma membrane, vacuole 27.73 22.22
Zm00001d018122_P001 Maize vacuole 27.43 22.2
EES18560 Sorghum golgi, plasma membrane 25.37 21.88
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 13.57 21.7
Os08t0484200-01 Rice golgi 26.25 21.55
TraesCS4B01G304400.1 Wheat plasma membrane 22.42 21.41
HORVU6Hr1G077610.1 Barley plasma membrane 25.37 21.18
Bra005343.1-P Field mustard plastid 17.4 21.15
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.07 21.14
HORVU4Hr1G078260.1 Barley plasma membrane 22.12 21.01
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 25.07 20.99
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 25.96 20.9
TraesCS4A01G404600.1 Wheat plasma membrane 21.83 20.85
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 24.78 20.74
HORVU4Hr1G057610.1 Barley plastid 25.07 20.63
TraesCS4D01G302600.1 Wheat plasma membrane 21.53 20.56
TraesCS4A01G104900.1 Wheat mitochondrion 23.3 20.41
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 26.25 20.37
TraesCS4D01G200100.1 Wheat plastid 24.78 20.29
Zm00001d027983_P001 Maize plasma membrane, plastid 21.24 19.89
EER92732 Sorghum golgi 21.53 19.84
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 25.66 19.68
TraesCS7D01G178000.1 Wheat golgi 23.6 19.61
TraesCS7B01G081700.1 Wheat golgi 23.89 19.57
TraesCS7A01G176700.1 Wheat golgi 23.6 19.28
Zm00001d048230_P001 Maize golgi 21.53 19.21
Os03t0391100-00 Rice endoplasmic reticulum, golgi 24.48 19.08
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 19.47 18.97
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 21.53 18.86
Zm00001d029395_P001 Maize plasma membrane, plastid 20.94 18.54
TraesCS4B01G199100.1 Wheat plastid 24.19 18.34
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 27.14 16.88
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 16.22 16.37
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 18.88 15.38
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 18.29 14.87
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 17.99 14.52
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 16.52 13.86
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 17.11 13.81
Bra012630.1-P Field mustard nucleus 19.17 10.5
Protein Annotations
EnsemblPlants:Bra000673.1EnsemblPlants:Bra000673.1-PEnsemblPlantsGene:Bra000673Gene3D:3.30.40.10GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF208PFAM:PF13639PFscan:PS50089SEG:segSignalP:SignalP-TMSMART:SM00184
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI00025402E9UniProt:M4C8Z5MapMan:19.2.2.1.5.3.3:
Description
AT4G09130 (E=5e-122) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA03:+:12391985..12393004
Molecular Weight (calculated)
38023.2 Da
IEP (calculated)
7.851
GRAVY (calculated)
-0.305
Length
339 amino acids
Sequence
(BLAST)
001: MTIFTRDLSH RFVLCVLLPL FIFQFLPNAT CQQESESKVT AESVIGIVLL SMFLLCIVGC CFFYACQSAE VESGSRQVLH TRARHGLDKD IIESFPFFLY
101: SEIKGLKVGK GGVECAICLN EFDDEETLRW MPPCSHTFHA SCIDVWLSSW STCPVCRANL SLKPGESFPY PSMDLETGNV QRGVQESPDD ISLTGNNTSN
201: YTTPRSRSTG LLSSWRMAEI FVPRSHSTGR SVVQLGENLE RFTLQLPDEV QRQLASLHPT RKSHMALPEA RSSRQGYRSG SVGSERSSFS QGRQTFRRAL
301: SMSFSSGRST LGKHVRETSQ TKDKDSGERS FERLMPEKV
Best Arabidopsis Sequence Match ( AT4G09130.1 )
(BLAST)
001: MTIFTRDFSH RILACVLLPL FLFQCLPYVT CQQGSESAGR NGKSKESSII GIVLLSLFLL LLVVYCLNYG CCIEENETGG HEVLHSRVRR GIDKDVIESF
101: PAFLYSEVKA FKIGNGGVEC AICLCEFEDE EPLRWMPPCS HTFHANCIDE WLSSRSTCPV CRANLSLKSG DSFPHPSMDV ETGNAQRGVQ ESPDERSLTG
201: SSVTCNNNAN YTTPRSRSTG LLSSWHVPEL FLPRSHSTGH SLVQPCQNID RFTLQLPEEV QRQLVSLNLI KRSHIALPRA RSSRQGYRSG SVGNERTGFS
301: QGRQTLRRAI STSLSFSFQP APVRSTLDRD NLMRETSQAN DKDFGERSFQ RLMPEKN
Arabidopsis Description
ATL37Putative RING-H2 finger protein ATL37 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0R4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.