Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 65.64 | 60.57 |
GSMUA_Achr8P09280_001 | Banana | cytosol | 6.15 | 45.83 |
GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 37.99 | 44.59 |
GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 43.58 | 44.19 |
GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 41.06 | 42.61 |
GSMUA_Achr10P... | Banana | plasma membrane | 43.85 | 40.46 |
GSMUA_Achr6P30500_001 | Banana | plasma membrane | 32.96 | 40.41 |
GSMUA_Achr3P20400_001 | Banana | mitochondrion | 38.83 | 40.41 |
KRG92822 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 36.87 | 39.29 |
KRH33975 | Soybean | golgi, plasma membrane, vacuole | 38.55 | 38.44 |
AT4G09100.1 | Thale cress | extracellular | 13.69 | 37.12 |
KRG96857 | Soybean | vacuole | 38.27 | 36.53 |
CDY53236 | Canola | plasma membrane | 35.2 | 36.31 |
KRH52998 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 33.52 | 35.93 |
KRH68588 | Soybean | plasma membrane | 36.31 | 35.52 |
KRH62285 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 32.96 | 34.71 |
Bra040642.1-P | Field mustard | plasma membrane | 36.87 | 34.2 |
GSMUA_AchrUn_... | Banana | plastid | 34.36 | 34.17 |
CDY18787 | Canola | plasma membrane | 36.59 | 33.85 |
Bra009960.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 28.49 | 33.55 |
CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.49 | 33.55 |
AT5G27420.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 34.36 | 33.42 |
Solyc03g112340.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 37.15 | 33.42 |
CDX80653 | Canola | plasma membrane | 28.21 | 33.33 |
PGSC0003DMT400046825 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 36.87 | 33.17 |
CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 32.4 | 33.14 |
CDY25038 | Canola | plasma membrane | 34.08 | 32.97 |
CDX99986 | Canola | plasma membrane | 32.12 | 32.95 |
Bra036631.1-P | Field mustard | plasma membrane | 32.12 | 32.86 |
VIT_14s0128g00120.t01 | Wine grape | plasma membrane, plastid, vacuole | 38.55 | 32.86 |
CDX86163 | Canola | plasma membrane | 27.37 | 32.67 |
Bra009962.1-P | Field mustard | mitochondrion, plastid | 25.98 | 32.52 |
AT3G05200.1 | Thale cress | plasma membrane | 36.03 | 32.41 |
Bra020591.1-P | Field mustard | plasma membrane | 34.36 | 32.28 |
CDY05577 | Canola | plasma membrane | 34.08 | 31.94 |
CDY39477 | Canola | extracellular | 27.65 | 31.94 |
Bra039454.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 34.36 | 31.87 |
Bra010641.1-P | Field mustard | extracellular, golgi | 27.37 | 31.82 |
CDX90377 | Canola | extracellular, golgi | 27.37 | 31.82 |
VIT_18s0001g06670.t01 | Wine grape | extracellular, plasma membrane, vacuole | 34.64 | 31.16 |
KRH16796 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 32.96 | 31.13 |
KRH72413 | Soybean | cytosol, golgi, vacuole | 32.12 | 30.75 |
CDX75097 | Canola | extracellular | 11.73 | 30.43 |
PGSC0003DMT400073575 | Potato | extracellular, plasma membrane | 36.03 | 29.79 |
Bra038386.1-P | Field mustard | extracellular | 11.45 | 29.71 |
CDY48058 | Canola | extracellular | 11.45 | 29.71 |
AT4G09120.1 | Thale cress | plasma membrane | 28.49 | 29.57 |
AT1G35330.1 | Thale cress | endoplasmic reticulum | 26.54 | 28.96 |
CDX82175 | Canola | extracellular | 18.72 | 28.63 |
AT4G40070.1 | Thale cress | extracellular, golgi, mitochondrion, plastid | 25.7 | 28.48 |
CDY05049 | Canola | plasma membrane | 22.91 | 28.08 |
GSMUA_AchrUn_... | Banana | cytosol, nucleus, plasma membrane | 13.13 | 27.98 |
GSMUA_Achr4P12270_001 | Banana | plastid | 13.41 | 27.75 |
Bra003887.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 27.65 | 27.58 |
CDY62007 | Canola | golgi, plasma membrane | 28.77 | 27.39 |
PGSC0003DMT400005472 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 29.89 | 27.37 |
Bra005375.1-P | Field mustard | cytosol, nucleus, plastid | 23.74 | 27.16 |
CDX84270 | Canola | cytosol, plastid, vacuole | 23.74 | 27.16 |
CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 23.74 | 27.16 |
Bra040855.1-P | Field mustard | golgi, plasma membrane | 28.49 | 27.13 |
CDY21367 | Canola | golgi, plasma membrane | 28.49 | 27.13 |
Bra000673.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 25.42 | 26.84 |
AT1G22500.1 | Thale cress | plasma membrane | 28.49 | 26.77 |
Solyc04g074820.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 29.33 | 26.72 |
CDY12022 | Canola | plasma membrane | 26.26 | 26.63 |
AT4G09110.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 22.35 | 26.49 |
Bra012330.1-P | Field mustard | golgi, plasma membrane | 25.42 | 26.45 |
Bra001139.1-P | Field mustard | extracellular, golgi, plasma membrane | 25.7 | 26.44 |
CDX90713 | Canola | extracellular, golgi, plasma membrane | 24.86 | 26.25 |
GSMUA_Achr1P17360_001 | Banana | nucleus, plasma membrane, plastid | 18.44 | 26.19 |
Bra028075.1-P | Field mustard | plasma membrane | 25.7 | 26.06 |
CDY03116 | Canola | plasma membrane | 25.42 | 25.78 |
AT2G34990.2 | Thale cress | plasma membrane | 23.18 | 25.62 |
Bra008016.1-P | Field mustard | plasma membrane | 28.77 | 25.56 |
CDY03651 | Canola | plasma membrane | 28.77 | 25.56 |
AT4G09130.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 25.42 | 25.49 |
CDX82179 | Canola | plasma membrane | 24.86 | 25.36 |
Solyc12g087860.1.1 | Tomato | vacuole | 26.26 | 25.2 |
CDY70284 | Canola | plasma membrane | 27.37 | 25.19 |
AT2G35000.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 26.54 | 25.13 |
AT1G72200.1 | Thale cress | plasma membrane | 28.21 | 25.0 |
CDX82176 | Canola | extracellular | 25.42 | 24.93 |
PGSC0003DMT400045807 | Potato | plasma membrane | 26.26 | 24.87 |
CDY31657 | Canola | extracellular, plasma membrane, plastid | 25.42 | 24.73 |
KRH16794 | Soybean | plasma membrane | 26.82 | 24.49 |
Bra005374.1-P | Field mustard | plasma membrane, plastid, vacuole | 25.14 | 24.46 |
CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 25.14 | 24.46 |
KRH72412 | Soybean | nucleus, plasma membrane, plastid | 26.26 | 24.35 |
CDY05145 | Canola | plasma membrane | 19.83 | 23.91 |
CDY70750 | Canola | extracellular, mitochondrion, nucleus | 20.11 | 23.76 |
CDY27787 | Canola | extracellular, plasma membrane, vacuole | 19.83 | 23.59 |
Bra008015.1-P | Field mustard | plasma membrane | 25.98 | 23.48 |
CDY03652 | Canola | plasma membrane | 25.98 | 23.48 |
GSMUA_Achr6P22700_001 | Banana | plasma membrane | 14.53 | 21.85 |
GSMUA_Achr9P13810_001 | Banana | golgi, mitochondrion, plastid, vacuole | 18.72 | 18.21 |
GSMUA_Achr9P00230_001 | Banana | vacuole | 18.44 | 17.93 |
CDY12527 | Canola | extracellular, plasma membrane, vacuole | 11.73 | 17.65 |
GSMUA_Achr3P05190_001 | Banana | endoplasmic reticulum, golgi, plastid | 18.72 | 17.45 |
CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.45 | 17.23 |
GSMUA_Achr6P26720_001 | Banana | plasma membrane | 16.2 | 16.52 |
GSMUA_Achr4P08120_001 | Banana | plasma membrane | 16.48 | 16.43 |
GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 16.48 | 16.08 |
CDY50446 | Canola | mitochondrion | 9.22 | 13.81 |
Protein Annotations
EnsemblPlants:GSMUA_Achr9P15010_001 | EnsemblPlants:GSMUA_Achr9T15010_001 | EnsemblPlantsGene:GSMUA_Achr9G15010_001 | Gene3D:3.30.40.10 | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 |
PANTHER:PTHR14155:SF263 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg | SignalP:SignalP-TM | SMART:SM00184 |
SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0002951DF5 | UniProt:M0U0F9 | MapMan:19.2.2.1.5.3.3 | : |
Description
Putative zinc finger, C3HC4 type domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G15010_001]
Coordinates
chr9:+:9857009..9858322
Molecular Weight (calculated)
37706.9 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.073
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTHGCRPI ASAGYVVLPL VLLLLTARCA HAQSSSASVP SDKYNPYFGA PSFNATMAIV IVFLVAALFL VGFLSIYIRH CAGGGSDRHG LARGTAARSR
101: RLLLQQQMGL SPELLYTFPT LVYAEVKGLK LGKGALECAV CLSEFEDDDA LRLLPPCSHA FHPECIDAWL ASHVTCPVCR SNLAEAANAT ADRETPTVGL
201: ARIEERQRPE VGLRSGSRPP KLRRSHTTGH SVVLPGENVE RYTLRLPEHV WREIFASQKL HRSTSCVSFA TAVEGSWRRG SRGTGGGGAG EGSSRGGRSV
301: RLGRSDQGSS SGKFTAVRTP FYCLGGGGSG ATKSVAAAAA AAAADDDESS ATGHAGRV
101: RLLLQQQMGL SPELLYTFPT LVYAEVKGLK LGKGALECAV CLSEFEDDDA LRLLPPCSHA FHPECIDAWL ASHVTCPVCR SNLAEAANAT ADRETPTVGL
201: ARIEERQRPE VGLRSGSRPP KLRRSHTTGH SVVLPGENVE RYTLRLPEHV WREIFASQKL HRSTSCVSFA TAVEGSWRRG SRGTGGGGAG EGSSRGGRSV
301: RLGRSDQGSS SGKFTAVRTP FYCLGGGGSG ATKSVAAAAA AAAADDDESS ATGHAGRV
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.