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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010641.1-P Field mustard extracellular, golgi 99.35 99.35
CDY39477 Canola extracellular 97.08 96.45
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 70.45 67.18
CDY53236 Canola plasma membrane 36.69 32.56
CDY31686 Canola nucleus 11.04 32.38
HORVU5Hr1G069980.1 Barley plasma membrane 39.61 31.77
CDY04519 Canola endoplasmic reticulum, extracellular, plasma membrane 14.61 31.69
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 40.26 31.63
CDX82175 Canola extracellular 24.03 31.62
TraesCS5B01G245800.1 Wheat plasma membrane 40.26 31.31
Zm00001d005936_P001 Maize plasma membrane 39.94 31.3
Os09t0468300-00 Rice golgi, plasma membrane 39.29 31.27
CDX75097 Canola extracellular 13.96 31.16
TraesCS5A01G248100.1 Wheat plasma membrane 39.94 30.98
Zm00001d020789_P001 Maize plasma membrane 39.61 30.65
EER99041 Sorghum endoplasmic reticulum, plasma membrane 40.58 30.34
CDY18787 Canola plasma membrane 37.99 30.23
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 34.09 30.0
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 29.55 29.93
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 29.55 29.84
TraesCS3D01G495500.1 Wheat vacuole 37.34 29.79
CDY48058 Canola extracellular 13.31 29.71
CDX86163 Canola plasma membrane 28.9 29.67
GSMUA_Achr3P20400_001 Banana mitochondrion 33.12 29.65
CDX99986 Canola plasma membrane 33.44 29.51
GSMUA_AchrUn_... Banana golgi, plasma membrane 33.77 29.46
CDY25038 Canola plasma membrane 35.39 29.46
TraesCS3B01G549900.1 Wheat vacuole 29.87 29.21
CDX80653 Canola plasma membrane 28.57 29.04
GSMUA_Achr6P30500_001 Banana plasma membrane 27.27 28.77
CDY05577 Canola plasma membrane 35.39 28.53
CDX84270 Canola cytosol, plastid, vacuole 28.9 28.43
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 31.82 28.41
GSMUA_AchrUn_... Banana plastid 32.79 28.06
CDY05713 Canola extracellular 13.31 27.89
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 19.16 27.83
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 28.25 27.8
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 34.74 27.58
HORVU4Hr1G080840.1 Barley cytosol 21.1 27.43
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 31.82 27.37
TraesCS6D01G113000.1 Wheat golgi 35.39 27.18
CDX82176 Canola extracellular 32.14 27.12
CDY03202 Canola plasma membrane 24.68 27.05
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 35.39 26.98
EES18560 Sorghum golgi, plasma membrane 34.42 26.97
Os08t0484200-01 Rice golgi 36.04 26.88
CDX78812 Canola plasma membrane 25.65 26.87
CDY44502 Canola plasma membrane 25.65 26.87
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 35.39 26.85
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 35.06 26.73
CDY35174 Canola plasma membrane 24.35 26.69
CDY62419 Canola cytosol 12.99 26.67
CDY21367 Canola golgi, plasma membrane 32.14 26.33
CDY62007 Canola golgi, plasma membrane 32.14 26.33
Zm00001d031261_P001 Maize golgi 32.14 26.26
CDX77681 Canola golgi, mitochondrion, plasma membrane, plastid 24.35 26.13
CDY63052 Canola golgi, mitochondrion, plasma membrane, plastid 24.35 26.13
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 31.17 26.09
CDY05049 Canola plasma membrane 24.68 26.03
CDY31657 Canola extracellular, plasma membrane, plastid 30.84 25.82
CDY03116 Canola plasma membrane 29.55 25.78
HORVU4Hr1G078260.1 Barley plasma membrane 29.87 25.77
CDX82179 Canola plasma membrane 29.22 25.64
CDY01502 Canola plasma membrane 24.68 25.59
CDY12022 Canola plasma membrane 29.22 25.5
CDY70284 Canola plasma membrane 32.14 25.45
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 34.74 25.42
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 34.09 25.3
TraesCS4A01G404600.1 Wheat plasma membrane 28.57 24.79
TraesCS4B01G304400.1 Wheat plasma membrane 28.57 24.79
TraesCS4D01G302600.1 Wheat plasma membrane 28.57 24.79
CDX90713 Canola extracellular, golgi, plasma membrane 27.27 24.78
EER92732 Sorghum golgi 29.55 24.73
Os03t0188200-01 Rice golgi 28.25 24.65
Zm00001d018122_P001 Maize vacuole 33.44 24.58
CDY03651 Canola plasma membrane 32.14 24.57
CDY03652 Canola plasma membrane 31.17 24.24
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.49 24.13
OQU85775 Sorghum golgi, plasma membrane, vacuole 33.12 24.11
TraesCS4A01G104900.1 Wheat mitochondrion 30.19 24.03
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 34.42 23.98
GSMUA_Achr10P... Banana plasma membrane 30.19 23.97
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.49 23.95
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.49 23.95
Zm00001d027983_P001 Maize plasma membrane, plastid 27.27 23.2
Zm00001d048230_P001 Maize golgi 28.57 23.16
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 32.79 23.11
TraesCS7D01G178000.1 Wheat golgi 30.52 23.04
TraesCS7B01G081700.1 Wheat golgi 30.84 22.95
HORVU6Hr1G077610.1 Barley plasma membrane 30.19 22.91
TraesCS4D01G200100.1 Wheat plastid 30.52 22.71
TraesCS7A01G176700.1 Wheat golgi 30.52 22.65
HORVU4Hr1G057610.1 Barley plastid 30.19 22.57
Zm00001d029395_P001 Maize plasma membrane, plastid 27.92 22.45
CDY05145 Canola plasma membrane 21.1 21.89
CDY70750 Canola extracellular, mitochondrion, nucleus 21.1 21.45
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 26.95 21.45
CDY27787 Canola extracellular, plasma membrane, vacuole 20.78 21.26
TraesCS4B01G199100.1 Wheat plastid 29.87 20.58
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 35.06 19.82
Os03t0391100-00 Rice endoplasmic reticulum, golgi 27.92 19.77
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 25.65 18.99
CDY12527 Canola extracellular, plasma membrane, vacuole 14.29 18.49
CDY13888 Canola plasma membrane 21.75 18.11
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 13.96 18.07
CDY35921 Canola endoplasmic reticulum, extracellular, plasma membrane 21.75 18.06
CDX98867 Canola endoplasmic reticulum, golgi 19.81 17.28
CDX81954 Canola endoplasmic reticulum, plasma membrane, vacuole 21.43 17.23
CDY06859 Canola endoplasmic reticulum, plasma membrane 23.05 17.03
CDY35230 Canola endoplasmic reticulum, plasma membrane 23.05 17.03
CDX97460 Canola endoplasmic reticulum, extracellular, plasma membrane 22.08 16.67
CDX92900 Canola endoplasmic reticulum, plasma membrane 22.4 16.63
CDY66475 Canola endoplasmic reticulum, plasma membrane 22.08 16.63
CDY50930 Canola endoplasmic reticulum, plasma membrane 22.4 16.43
CDX70126 Canola plasma membrane 21.43 16.38
CDY50446 Canola mitochondrion 12.01 15.48
CDY31685 Canola cytosol 0.97 13.64
CDX90435 Canola nucleus 23.7 11.89
CDY05714 Canola cytosol 4.55 6.57
Protein Annotations
EnsemblPlants:CDX90377EnsemblPlantsGene:GSBRNA2T00150975001Gene3D:3.30.40.10GO:A0A078DMU0GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155
PANTHER:PTHR14155:SF414PFAM:PF13639PFscan:PS50089ProteinID:CDX90377ProteinID:CDX90377.1SignalP:SignalP-TM
SMART:SM00184SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI0004EE2480MapMan:19.2.2.1.5.3.3:
Description
BnaA08g16070D
Coordinates
chrLK031862:+:1471660..1472586
Molecular Weight (calculated)
34164.5 Da
IEP (calculated)
8.417
GRAVY (calculated)
-0.344
Length
308 amino acids
Sequence
(BLAST)
001: MARVQGFISH RWIIFQLITV LHVANAQSLP PPSQDELQPG HAPSKTTVFG VLIAAFFFFG LLSVYIRHCT RAMPGHSNTN SRRRAFEGCS RRGGLEDAVV
101: ESFPVFAYSS VKESKIGSGD LECAICLNEL EDRETVRLLP VCNHLFHVDC IDAWLYSHAT CPVCRFNLTA KPVKTGSEAP VSDHVVIDIR GDSEADEEEE
201: KSHHRRPSSE IVGKFPRSNS TGHSMGRLSD GTERFTLRLP EDVRRRIMAA KGRRLKRTRS FDADLMDSGY VVGSGGKSDR VSWADRWGLF VSKSNSGSVR
301: SPNGDSLT
Best Arabidopsis Sequence Match ( AT4G40070.1 )
(BLAST)
001: MMTRVECFNP HRWIILHVAI IIQSKANAQS FSPSPPDLQT GHTPSKTTVF AVLVTLFFLT GLLSVYIRHC ARSNPDSSTR YFRNRANDGS SRRGGLDNAV
101: VESFPVFAYS SVKESKIGSK DLECAICLNE LEDHETVRLL PICNHLFHID CIDTWLYSHA TCPVCRSNLT AKSNKPGDED DGVPLAAMRD HVVVDIETVE
201: VAKSHHRRLS SEISGKFPRS NSTGHSMDRF SDGTERFTLR LPDDVKMRLM AVKGRRLKRT RSFDVDLTAE HYCRSGEESS NTIGSGAKSG RVNWPDRWGL
301: TLFVSKSNSG SVRSQKSNGE PLK
Arabidopsis Description
ATL32RING-H2 finger protein ATL32 [Source:UniProtKB/Swiss-Prot;Acc:Q8W571]
SUBAcon: [mitochondrion,golgi,plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.