Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05713 | Canola | extracellular | 38.81 | 97.96 |
| CDY05714 | Canola | cytosol | 49.06 | 85.45 |
| CDY13888 | Canola | plasma membrane | 78.44 | 78.65 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.98 | 76.5 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 75.47 | 71.79 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 61.19 | 55.64 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 60.92 | 55.26 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 61.99 | 55.16 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 61.99 | 55.16 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 60.92 | 53.81 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 59.84 | 53.49 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 40.7 | 46.6 |
| PGSC0003DMT400070587 | Potato | plastid | 42.86 | 46.22 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 46.63 | 41.29 |
| KRH76331 | Soybean | endoplasmic reticulum | 45.82 | 39.91 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 38.54 | 38.65 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 39.35 | 38.32 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 45.55 | 36.03 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 33.15 | 35.04 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 33.42 | 34.54 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 33.96 | 34.33 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 32.88 | 33.15 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 33.96 | 32.06 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 33.96 | 31.98 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 32.08 | 30.91 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 19.68 | 30.67 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.96 | 29.17 |
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 30.46 | 28.9 |
| TraesCS1D01G453000.1 | Wheat | extracellular, plasma membrane | 33.69 | 28.8 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 27.22 | 28.61 |
| CDY31686 | Canola | nucleus | 8.09 | 28.57 |
| CDX70126 | Canola | plasma membrane | 30.19 | 27.79 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 10.51 | 27.46 |
| CDX75097 | Canola | extracellular | 9.97 | 26.81 |
| CDY48058 | Canola | extracellular | 9.7 | 26.09 |
| Zm00001d009777_P001 | Maize | extracellular, golgi, plasma membrane | 28.3 | 25.8 |
| EES18815 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 32.08 | 25.16 |
| CDX82175 | Canola | extracellular | 15.63 | 24.79 |
| CDY62419 | Canola | cytosol | 8.89 | 22.0 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 16.98 | 21.95 |
| CDX90377 | Canola | extracellular, golgi | 18.06 | 21.75 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 16.71 | 21.6 |
| CDY39477 | Canola | extracellular | 17.79 | 21.29 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 16.44 | 20.07 |
| CDY35174 | Canola | plasma membrane | 14.82 | 19.57 |
| CDY03202 | Canola | plasma membrane | 14.82 | 19.57 |
| CDY21367 | Canola | golgi, plasma membrane | 19.68 | 19.41 |
| CDY31656 | Canola | cytosol, endoplasmic reticulum, plastid | 16.17 | 19.17 |
| CDY62007 | Canola | golgi, plasma membrane | 19.41 | 19.15 |
| CDY53236 | Canola | plasma membrane | 17.79 | 19.02 |
| CDX80653 | Canola | plasma membrane | 15.36 | 18.81 |
| CDX99986 | Canola | plasma membrane | 17.52 | 18.62 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 17.52 | 18.57 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 15.63 | 18.53 |
| CDY70284 | Canola | plasma membrane | 19.41 | 18.51 |
| CDX86163 | Canola | plasma membrane | 14.82 | 18.33 |
| CDY05049 | Canola | plasma membrane | 14.29 | 18.15 |
| CDX82176 | Canola | extracellular | 17.79 | 18.08 |
| CDY44502 | Canola | plasma membrane | 14.29 | 18.03 |
| CDX78812 | Canola | plasma membrane | 14.29 | 18.03 |
| CDY01502 | Canola | plasma membrane | 14.29 | 17.85 |
| CDY18787 | Canola | plasma membrane | 18.6 | 17.83 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 17.52 | 17.66 |
| CDY03651 | Canola | plasma membrane | 19.14 | 17.62 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 17.25 | 17.39 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 15.36 | 16.81 |
| CDY03652 | Canola | plasma membrane | 17.52 | 16.41 |
| CDX82179 | Canola | plasma membrane | 15.36 | 16.24 |
| CDY25038 | Canola | plasma membrane | 16.17 | 16.22 |
| CDY03116 | Canola | plasma membrane | 15.36 | 16.15 |
| CDY12022 | Canola | plasma membrane | 15.09 | 15.86 |
| CDY05577 | Canola | plasma membrane | 15.9 | 15.45 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 7.55 | 11.76 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 7.28 | 11.34 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 8.36 | 10.23 |
| CDY05145 | Canola | plasma membrane | 7.28 | 9.09 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 7.01 | 8.64 |
| CDX90435 | Canola | nucleus | 14.02 | 8.47 |
| CDY50446 | Canola | mitochondrion | 5.12 | 7.95 |
| CDY31685 | Canola | cytosol | 0.27 | 4.55 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | GO:A0A078HDR7 | UniProt:A0A078HDR7 | EnsemblPlants:CDY35921 | ProteinID:CDY35921 |
| ProteinID:CDY35921.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00059472001 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF431 | SMART:SM00184 |
| SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE9E9F | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g00660DBnaA07g00660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDR7]
Coordinates
chrLK032363:+:356677..357849
Molecular Weight (calculated)
42595.9 Da
IEP (calculated)
8.008
GRAVY (calculated)
-0.370
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPPQAISIL FFFFLDYVSA QSPPPPPYTT NDFFKPSLVI TTGVFSVVFT LTFVLLVYAK CFHNDLRSET DEDREIGRLE RLWQGLFNQS SRLSSGLNRT
101: AIESLPFFRF SALKGSKQGL ECSVCLSKFE DVEILRLLPK CKHAFHIECI DEWLEQHATC PLCRNRVCIE DELSVFSVLD SNMEIYIERE EGEDSSRFSS
201: FRKILKFGKN DKSLSLVEQG NEKRLHKFRH RIVVSDLVFK NRWSNVTPSD LTRLTSDMLN SMSSDRFSSM ERVDLRDKEE MDMKRMMKNK DSTRRVVSEI
301: TAVPRLSVLE VTTAVGGNDG GLAASTASTS RSDAIAATEE RRRQLWLPIA RRTAHWFANR EKMNELNTTK P
101: AIESLPFFRF SALKGSKQGL ECSVCLSKFE DVEILRLLPK CKHAFHIECI DEWLEQHATC PLCRNRVCIE DELSVFSVLD SNMEIYIERE EGEDSSRFSS
201: FRKILKFGKN DKSLSLVEQG NEKRLHKFRH RIVVSDLVFK NRWSNVTPSD LTRLTSDMLN SMSSDRFSSM ERVDLRDKEE MDMKRMMKNK DSTRRVVSEI
301: TAVPRLSVLE VTTAVGGNDG GLAASTASTS RSDAIAATEE RRRQLWLPIA RRTAHWFANR EKMNELNTTK P
001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
Arabidopsis Description
ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.