Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039216_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 73.46 | 76.47 |
| EES18815 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 83.78 | 72.09 |
| Os05t0596500-01 | Rice | endoplasmic reticulum, plasma membrane | 55.77 | 58.96 |
| TraesCS1A01G444900.1 | Wheat | golgi, plasma membrane | 52.58 | 54.45 |
| HORVU1Hr1G095220.1 | Barley | golgi, plasma membrane | 52.33 | 54.06 |
| TraesCS1B01G479700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 54.05 | 50.93 |
| TraesCS1D01G453000.1 | Wheat | extracellular, plasma membrane | 53.32 | 50.0 |
| GSMUA_Achr6P26720_001 | Banana | plasma membrane | 34.4 | 39.89 |
| GSMUA_Achr9P06250_001 | Banana | endoplasmic reticulum, plasma membrane | 33.66 | 37.33 |
| PGSC0003DMT400070587 | Potato | plastid | 30.96 | 36.63 |
| Solyc05g018310.1.1 | Tomato | extracellular, plasma membrane, vacuole | 28.99 | 36.42 |
| GSMUA_Achr4P08120_001 | Banana | plasma membrane | 31.7 | 35.93 |
| GSMUA_Achr9P00230_001 | Banana | vacuole | 31.7 | 35.05 |
| CDY05713 | Canola | extracellular | 12.29 | 34.01 |
| GSMUA_Achr6P22700_001 | Banana | plasma membrane | 19.16 | 32.77 |
| PGSC0003DMT400000810 | Potato | plasma membrane | 28.26 | 31.08 |
| KRH76331 | Soybean | endoplasmic reticulum | 31.45 | 30.05 |
| AT2G20030.1 | Thale cress | endoplasmic reticulum, plasma membrane | 28.5 | 29.74 |
| CDY13888 | Canola | plasma membrane | 27.03 | 29.73 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 29.98 | 29.4 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 30.22 | 29.29 |
| Bra024178.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 30.22 | 29.29 |
| Solyc12g007320.1.1 | Tomato | plasma membrane | 27.27 | 29.13 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 27.27 | 28.98 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 28.99 | 28.92 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 28.75 | 28.61 |
| Bra010349.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 29.48 | 28.57 |
| Bra011068.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 29.24 | 28.54 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 25.8 | 28.3 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 28.99 | 28.3 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 28.99 | 28.3 |
| KRH39345 | Soybean | endoplasmic reticulum, vacuole | 28.99 | 28.16 |
| KRH16295 | Soybean | plasma membrane | 26.54 | 27.34 |
| AT4G28890.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 28.99 | 27.31 |
| KRH62061 | Soybean | plastid | 17.94 | 26.94 |
| VIT_11s0016g03420.t01 | Wine grape | plastid | 30.96 | 26.87 |
| Zm00001d014612_P001 | Maize | peroxisome | 26.04 | 26.7 |
| KRH52730 | Soybean | golgi, plasma membrane, vacuole | 25.31 | 25.12 |
| Zm00001d026494_P001 | Maize | plastid | 11.55 | 23.15 |
| CDY05714 | Canola | cytosol | 11.06 | 21.13 |
| Zm00001d031261_P001 | Maize | golgi | 17.94 | 19.36 |
| Zm00001d005936_P001 | Maize | plasma membrane | 18.18 | 18.83 |
| Zm00001d020789_P001 | Maize | plasma membrane | 18.18 | 18.59 |
| Zm00001d016901_P001 | Maize | vacuole | 15.72 | 18.44 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 15.97 | 17.96 |
| Zm00001d048230_P001 | Maize | golgi | 16.46 | 17.63 |
| Zm00001d030038_P001 | Maize | plastid | 9.83 | 17.24 |
| Zm00001d003499_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 15.97 | 16.75 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 14.99 | 15.93 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 15.97 | 15.44 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 15.72 | 15.42 |
| Zm00001d018122_P001 | Maize | vacuole | 14.74 | 14.32 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | UniProt:A0A1D6FLZ1 | ProteinID:AQK92686.1 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 |
| PANTHER:PTHR14155:SF220 | SMART:SM00184 | SUPFAM:SSF57850 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000843BD0B |
| EnsemblPlantsGene:Zm00001d009777 | EnsemblPlants:Zm00001d009777_P001 | EnsemblPlants:Zm00001d009777_T001 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
Putative RING zinc finger domain superfamily protein
Coordinates
chr8:+:80609627..80610850
Molecular Weight (calculated)
44006.5 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.013
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPRQHLAL VAVLVSAAVA AQTTTDELSA SPADNNSALV AGVGIKVSFR PRVAIVVGIF TMIFSLTFLV LMYAKFCHPS GSSSNNGAAA AAVCSVGVPK
101: QVIQSLPFFR FATLRGARQG MECSVCLARF DDADLLRLLP RCRHAFHLHC VDRWLQSNAS CPLCRTSVDA DHATLGLKYP SSARIVFGGD ALSSGRFDDA
201: AGAGTGSGRD LLDIFVERVP GPYIKKTISS SPPPPGLDRH KHRIIVSDVL FRSRWSELNS ADLIALDTEM LRSVSSGRFV FPPEYNNEMI AAAAAEEEEE
301: EDDGIMPTAM GRKRLLEPVD DVVDDDLLGD GCRSGFAVSA SASAARMISS GVRSMSEIVS LSRERLSEED NRRWLTIARR TARWFAAGRA SRGNEEEHRA
401: VHVVDDV
101: QVIQSLPFFR FATLRGARQG MECSVCLARF DDADLLRLLP RCRHAFHLHC VDRWLQSNAS CPLCRTSVDA DHATLGLKYP SSARIVFGGD ALSSGRFDDA
201: AGAGTGSGRD LLDIFVERVP GPYIKKTISS SPPPPGLDRH KHRIIVSDVL FRSRWSELNS ADLIALDTEM LRSVSSGRFV FPPEYNNEMI AAAAAEEEEE
301: EDDGIMPTAM GRKRLLEPVD DVVDDDLLGD GCRSGFAVSA SASAARMISS GVRSMSEIVS LSRERLSEED NRRWLTIARR TARWFAAGRA SRGNEEEHRA
401: VHVVDDV
001: MNSPQEISIL FFFIIFLDYV SAQSPPPPNL YATSDLFKPS LAIITGVFSI VFTLTFVLLV YAKCFHNDLR SETDSDGERI RHDRLWQGLF NRSSRFSGLD
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
101: KKAIESLPFF RFSALKGLKQ GLECSVCLSK FEDVEILRLL PKCRHAFHIG CIDQWLEQHA TCPLCRNRVN IEDDLSVLGN SSTSLRILNQ SETREEDSRL
201: EIYIEREEGT NDGSSRFSSF RKILKKSLLL EREGNENIDE KKLMHKFNHR IVVSDAVFKN RWSNITSSDL TFLTSEMLNS VSSDRFSSVD RVHRGNLRDK
301: EDMEMKRMLI KHKDSSRRTV SEITTVSREK AVGGSYRGST ASTSQNYAVT ATTEERRRRL WLPIARRTAQ WFVNREKSND LNTTRQNLNV
Arabidopsis Description
ATL12Putative RING-H2 finger protein ATL12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL78]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.