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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:vacuole
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 65.54 64.86
TraesCS4A01G104900.1 Wheat mitochondrion 60.31 59.69
HORVU4Hr1G057610.1 Barley plastid 63.45 58.98
TraesCS4D01G200100.1 Wheat plastid 63.71 58.94
TraesCS4B01G199100.1 Wheat plastid 63.45 54.36
Os03t0391100-00 Rice endoplasmic reticulum, golgi 51.96 45.75
AT4G09100.1 Thale cress extracellular 12.79 37.12
CDX75097 Canola extracellular 12.01 33.33
Bra038386.1-P Field mustard extracellular 11.75 32.61
CDY48058 Canola extracellular 11.75 32.61
Zm00001d026494_P001 Maize plastid 15.93 30.05
GSMUA_AchrUn_... Banana plastid 28.2 30.0
CDY53236 Canola plasma membrane 25.85 28.53
CDX82175 Canola extracellular 17.23 28.21
Zm00001d005936_P001 Maize plasma membrane 28.72 27.99
Bra010641.1-P Field mustard extracellular, golgi 22.45 27.92
CDX90377 Canola extracellular, golgi 22.45 27.92
Zm00001d031261_P001 Maize golgi 27.42 27.85
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 24.28 27.68
CDY39477 Canola extracellular 22.19 27.42
CDY18787 Canola plasma membrane 27.42 27.13
Bra040642.1-P Field mustard plasma membrane 26.89 26.68
KRH33975 Soybean golgi, plasma membrane, vacuole 24.54 26.18
Zm00001d048230_P001 Maize golgi 25.85 26.05
Bra036631.1-P Field mustard plasma membrane 23.76 26.0
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 23.76 26.0
Zm00001d020789_P001 Maize plasma membrane 26.89 25.88
CDX99986 Canola plasma membrane 23.24 25.5
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 24.28 25.27
AT3G05200.1 Thale cress plasma membrane 26.11 25.13
KRG96857 Soybean vacuole 24.54 25.07
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 24.8 25.07
CDX86163 Canola plasma membrane 19.58 25.0
KRH72413 Soybean cytosol, golgi, vacuole 24.28 24.87
Zm00001d027983_P001 Maize plasma membrane, plastid 23.5 24.86
CDX80653 Canola plasma membrane 19.58 24.75
KRH68588 Soybean plasma membrane 23.5 24.59
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 19.32 24.34
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 19.32 24.34
CDY25038 Canola plasma membrane 23.5 24.32
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 21.15 24.25
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 26.63 24.23
Zm00001d003499_P001 Maize endoplasmic reticulum, golgi, plasma membrane 24.54 24.23
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 20.37 24.15
Zm00001d030038_P001 Maize plastid 14.62 24.14
Bra009962.1-P Field mustard mitochondrion, plastid 18.02 24.13
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 24.28 24.09
CDY05577 Canola plasma membrane 24.02 24.08
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 22.45 23.96
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 20.89 23.53
Bra020591.1-P Field mustard plasma membrane 23.24 23.36
Bra040855.1-P Field mustard golgi, plasma membrane 22.72 23.14
CDY21367 Canola golgi, plasma membrane 22.72 23.14
CDY70284 Canola plasma membrane 23.5 23.14
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 24.02 23.12
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 24.02 23.12
Zm00001d016901_P001 Maize vacuole 20.89 23.05
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 22.72 23.02
CDY05049 Canola plasma membrane 17.49 22.95
CDY62007 Canola golgi, plasma membrane 22.45 22.87
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 25.07 22.86
AT1G72200.1 Thale cress plasma membrane 24.02 22.77
CDY31657 Canola extracellular, plasma membrane, plastid 21.67 22.55
Bra005375.1-P Field mustard cytosol, nucleus, plastid 18.28 22.36
CDX84270 Canola cytosol, plastid, vacuole 18.28 22.36
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 18.28 22.36
Bra008016.1-P Field mustard plasma membrane 23.5 22.33
CDY03651 Canola plasma membrane 23.5 22.33
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 21.41 22.28
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 21.41 22.28
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 22.72 22.14
AT1G22500.1 Thale cress plasma membrane 21.93 22.05
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 23.76 21.93
CDX82176 Canola extracellular 20.89 21.92
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 22.19 21.74
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 22.45 21.61
AT1G35330.1 Thale cress endoplasmic reticulum 18.28 21.34
PGSC0003DMT400073575 Potato extracellular, plasma membrane 24.02 21.25
Bra012330.1-P Field mustard golgi, plasma membrane 19.06 21.22
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 16.71 21.19
Zm00001d018122_P001 Maize vacuole 22.98 21.0
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 18.54 20.94
AT2G34990.2 Thale cress plasma membrane 17.49 20.68
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 19.06 20.45
CDX90713 Canola extracellular, golgi, plasma membrane 18.02 20.35
Bra008015.1-P Field mustard plasma membrane 20.89 20.2
CDY03652 Canola plasma membrane 20.89 20.2
AT4G09120.1 Thale cress plasma membrane 18.02 20.0
CDX82179 Canola plasma membrane 18.28 19.94
CDY03116 Canola plasma membrane 18.28 19.83
CDY12022 Canola plasma membrane 18.02 19.55
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 17.75 19.54
KRH16794 Soybean plasma membrane 19.84 19.39
PGSC0003DMT400045807 Potato plasma membrane 19.06 19.31
Bra028075.1-P Field mustard plasma membrane 17.75 19.26
KRH72412 Soybean nucleus, plasma membrane, plastid 19.32 19.17
Solyc12g087860.1.1 Tomato vacuole 18.54 19.03
CDY05145 Canola plasma membrane 14.1 18.18
CDY27787 Canola extracellular, plasma membrane, vacuole 14.1 17.94
CDY70750 Canola extracellular, mitochondrion, nucleus 13.58 17.16
Zm00001d039216_P001 Maize endoplasmic reticulum, extracellular, golgi 17.49 17.14
Zm00001d014612_P001 Maize peroxisome 16.97 16.37
Zm00001d009777_P001 Maize extracellular, golgi, plasma membrane 15.93 14.99
CDY12527 Canola extracellular, plasma membrane, vacuole 8.36 13.45
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 8.09 13.03
CDY50446 Canola mitochondrion 8.09 12.97
Protein Annotations
EntrezGene:103644697MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10UniProt:A0A1D6K4X2GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016874InterPro:IPR001841InterPro:IPR013083
ProteinID:ONL98650.1PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF322SMART:SM00184
SUPFAM:SSF57850SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002214992EnsemblPlantsGene:Zm00001d029395EnsemblPlants:Zm00001d029395_P001
EnsemblPlants:Zm00001d029395_T001InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
E3 ubiquitin-protein ligase ATL6
Coordinates
chr1:+:68809509..68810660
Molecular Weight (calculated)
39260.0 Da
IEP (calculated)
8.237
GRAVY (calculated)
0.185
Length
383 amino acids
Sequence
(BLAST)
001: MAPTPPTSTR PRRHHTILRP PLALALALAI VRPASPQLLQ PPPGATVSSA FSPPPSPPVD GVGGRFAVTT SLLFVGLIVA LFLLGFFSAF LRRRCGAGAD
101: TRGRGGGGGV GSLAASAGAA AGAGLDAAAM EALPVLTYAT ARAVRAGRGA LECAVCLSAF DAAGEKLRLL PGCCHVFHAA CVDAWLAAHV TCPVCRADLS
201: DPAVAAAGHV LAADLAADTV VVVNVVDGPA APAAEAAGQD ATPSETAEDR FTLRLPERLR REIDEARRLR RALSASTALP SGGPLASSAA APRTMSAARP
301: SRRWSGLLRA LSGSRRVSEP DGHWRVVPLP TGAGNGEVVQ EQDDVDKYFS LTFAGFVIDG DVAAVDWHPE VFHVSTGVPA AQR
Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)
001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV
Arabidopsis Description
ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.