Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005375.1-P | Field mustard | cytosol, nucleus, plastid | 98.72 | 98.72 |
| CDX84270 | Canola | cytosol, plastid, vacuole | 93.61 | 93.61 |
| AT2G34990.2 | Thale cress | plasma membrane | 36.42 | 35.19 |
| CDX75097 | Canola | extracellular | 14.06 | 31.88 |
| CDY48058 | Canola | extracellular | 13.74 | 31.16 |
| CDY39477 | Canola | extracellular | 28.11 | 28.39 |
| CDX90377 | Canola | extracellular, golgi | 27.8 | 28.25 |
| CDX80653 | Canola | plasma membrane | 25.88 | 26.73 |
| GSMUA_Achr6P30500_001 | Banana | plasma membrane | 24.92 | 26.71 |
| CDX84269 | Canola | endoplasmic reticulum, plasma membrane, plastid | 30.99 | 26.36 |
| CDY31657 | Canola | extracellular, plasma membrane, plastid | 30.99 | 26.36 |
| CDX86162 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.56 | 26.32 |
| CDY53236 | Canola | plasma membrane | 29.07 | 26.22 |
| HORVU4Hr1G080840.1 | Barley | cytosol | 19.49 | 25.74 |
| CDX90713 | Canola | extracellular, golgi, plasma membrane | 27.8 | 25.66 |
| GSMUA_Achr5P17910_001 | Banana | golgi, plasma membrane, vacuole | 28.11 | 25.51 |
| CDY04519 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.5 | 25.35 |
| CDX86163 | Canola | plasma membrane | 24.28 | 25.33 |
| GSMUA_Achr7P12810_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 24.6 | 25.25 |
| CDX82175 | Canola | extracellular | 18.85 | 25.21 |
| CDY18787 | Canola | plasma membrane | 30.99 | 25.06 |
| HORVU4Hr1G022090.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 16.93 | 25.0 |
| CDY31686 | Canola | nucleus | 8.31 | 24.76 |
| CDY05049 | Canola | plasma membrane | 23.0 | 24.66 |
| CDY01502 | Canola | plasma membrane | 23.32 | 24.58 |
| EER99041 | Sorghum | endoplasmic reticulum, plasma membrane | 32.27 | 24.51 |
| CDX82179 | Canola | plasma membrane | 27.48 | 24.5 |
| GSMUA_AchrUn_... | Banana | plastid | 28.11 | 24.44 |
| Zm00001d020789_P001 | Maize | plasma membrane | 30.99 | 24.37 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 27.48 | 24.36 |
| HORVU5Hr1G069980.1 | Barley | plasma membrane | 29.71 | 24.22 |
| Zm00001d005936_P001 | Maize | plasma membrane | 30.35 | 24.17 |
| CDX78812 | Canola | plasma membrane | 22.68 | 24.15 |
| CDY44502 | Canola | plasma membrane | 22.68 | 24.15 |
| CDY19719 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.84 | 24.0 |
| TraesCS5D01G254900.1 | Wheat | golgi, plasma membrane | 30.03 | 23.98 |
| EES18560 | Sorghum | golgi, plasma membrane | 30.03 | 23.92 |
| Os09t0468300-00 | Rice | golgi, plasma membrane | 29.39 | 23.77 |
| GSMUA_Achr9P15010_001 | Banana | endoplasmic reticulum, plasma membrane | 27.16 | 23.74 |
| Zm00001d031261_P001 | Maize | golgi | 28.43 | 23.61 |
| TraesCS6B01G151000.1 | Wheat | extracellular, golgi, plasma membrane | 30.35 | 23.51 |
| CDY03116 | Canola | plasma membrane | 26.52 | 23.51 |
| CDX99986 | Canola | plasma membrane | 26.2 | 23.5 |
| GSMUA_Achr3P06680_001 | Banana | mitochondrion, plastid | 29.07 | 23.45 |
| CDX77681 | Canola | golgi, mitochondrion, plasma membrane, plastid | 21.41 | 23.34 |
| GSMUA_Achr3P20400_001 | Banana | mitochondrion | 25.56 | 23.26 |
| TraesCS5B01G245800.1 | Wheat | plasma membrane | 29.39 | 23.23 |
| CDY12022 | Canola | plasma membrane | 26.2 | 23.23 |
| TraesCS6D01G113000.1 | Wheat | golgi | 29.71 | 23.19 |
| TraesCS5A01G248100.1 | Wheat | plasma membrane | 29.39 | 23.17 |
| TraesCS6A01G122800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 30.03 | 23.15 |
| CDY21367 | Canola | golgi, plasma membrane | 27.8 | 23.14 |
| CDY63052 | Canola | golgi, mitochondrion, plasma membrane, plastid | 21.09 | 23.0 |
| CDY62007 | Canola | golgi, plasma membrane | 27.48 | 22.87 |
| CDY03651 | Canola | plasma membrane | 29.07 | 22.58 |
| TraesCS3B01G549900.1 | Wheat | vacuole | 22.68 | 22.54 |
| HORVU6Hr1G022590.1 | Barley | golgi, mitochondrion | 29.07 | 22.52 |
| CDY03202 | Canola | plasma membrane | 20.13 | 22.42 |
| CDY70284 | Canola | plasma membrane | 27.8 | 22.36 |
| TraesCS3D01G495500.1 | Wheat | vacuole | 27.48 | 22.28 |
| CDY25038 | Canola | plasma membrane | 26.2 | 22.16 |
| Os08t0484200-01 | Rice | golgi | 29.07 | 22.03 |
| CDX82176 | Canola | extracellular | 25.56 | 21.92 |
| Os03t0188200-01 | Rice | golgi | 24.6 | 21.81 |
| EER92732 | Sorghum | golgi | 25.56 | 21.74 |
| CDY35174 | Canola | plasma membrane | 19.49 | 21.71 |
| Zm00001d037192_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 29.07 | 21.62 |
| HORVU4Hr1G078260.1 | Barley | plasma membrane | 24.6 | 21.57 |
| CDY03652 | Canola | plasma membrane | 27.16 | 21.46 |
| TraesCS6B01G346000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 27.48 | 21.39 |
| Os06t0218300-01 | Rice | endoplasmic reticulum, extracellular, golgi | 30.03 | 21.27 |
| CDY05577 | Canola | plasma membrane | 25.88 | 21.2 |
| TraesCS4B01G304400.1 | Wheat | plasma membrane | 23.96 | 21.13 |
| TraesCS7B01G081700.1 | Wheat | golgi | 27.8 | 21.01 |
| Zm00001d027983_P001 | Maize | plasma membrane, plastid | 24.28 | 20.99 |
| TraesCS4D01G302600.1 | Wheat | plasma membrane | 23.64 | 20.85 |
| TraesCS7D01G178000.1 | Wheat | golgi | 27.16 | 20.83 |
| TraesCS6D01G294800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.84 | 20.74 |
| TraesCS7A01G176700.1 | Wheat | golgi | 27.48 | 20.72 |
| TraesCS4A01G404600.1 | Wheat | plasma membrane | 23.32 | 20.56 |
| TraesCS6A01G315600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 26.52 | 20.49 |
| HORVU6Hr1G077610.1 | Barley | plasma membrane | 26.52 | 20.44 |
| CDY05713 | Canola | extracellular | 9.58 | 20.41 |
| GSMUA_Achr10P... | Banana | plasma membrane | 25.24 | 20.36 |
| Zm00001d048230_P001 | Maize | golgi | 24.28 | 20.0 |
| Zm00001d052189_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 26.52 | 20.0 |
| TraesCS4A01G104900.1 | Wheat | mitochondrion | 24.28 | 19.64 |
| OQU85775 | Sorghum | golgi, plasma membrane, vacuole | 26.2 | 19.39 |
| Zm00001d018122_P001 | Maize | vacuole | 25.88 | 19.33 |
| HORVU4Hr1G057610.1 | Barley | plastid | 25.24 | 19.17 |
| CDY70750 | Canola | extracellular, mitochondrion, nucleus | 18.53 | 19.14 |
| CDY62419 | Canola | cytosol | 8.95 | 18.67 |
| TraesCS4D01G200100.1 | Wheat | plastid | 24.6 | 18.6 |
| Os02t0759400-01 | Rice | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.88 | 18.54 |
| CDY12527 | Canola | extracellular, plasma membrane, vacuole | 14.06 | 18.49 |
| Zm00001d029395_P001 | Maize | plasma membrane, plastid | 22.36 | 18.28 |
| CDY05145 | Canola | plasma membrane | 17.25 | 18.18 |
| KXG39223 | Sorghum | golgi, plasma membrane, plastid, vacuole | 22.36 | 18.09 |
| CDY27787 | Canola | extracellular, plasma membrane, vacuole | 17.25 | 17.94 |
| CDY25739 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 13.42 | 17.65 |
| TraesCS4B01G199100.1 | Wheat | plastid | 24.6 | 17.23 |
| CDX98867 | Canola | endoplasmic reticulum, golgi | 18.53 | 16.43 |
| HORVU7Hr1G036380.2 | Barley | endoplasmic reticulum | 21.73 | 16.35 |
| Os03t0391100-00 | Rice | endoplasmic reticulum, golgi | 22.68 | 16.32 |
| CDY35921 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 19.17 | 16.17 |
| OQU76061 | Sorghum | cytosol, peroxisome, plasma membrane | 28.11 | 16.15 |
| CDY13888 | Canola | plasma membrane | 18.85 | 15.95 |
| CDY06859 | Canola | endoplasmic reticulum, plasma membrane | 20.77 | 15.59 |
| CDY50446 | Canola | mitochondrion | 11.82 | 15.48 |
| CDY50930 | Canola | endoplasmic reticulum, plasma membrane | 20.77 | 15.48 |
| CDX97460 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.13 | 15.44 |
| CDY35230 | Canola | endoplasmic reticulum, plasma membrane | 20.45 | 15.35 |
| CDY66475 | Canola | endoplasmic reticulum, plasma membrane | 19.81 | 15.16 |
| CDX81954 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.53 | 15.14 |
| CDX92900 | Canola | endoplasmic reticulum, plasma membrane | 19.81 | 14.94 |
| CDX70126 | Canola | plasma membrane | 19.17 | 14.89 |
| CDX90435 | Canola | nucleus | 22.68 | 11.56 |
| CDY05714 | Canola | cytosol | 6.07 | 8.92 |
| CDY31685 | Canola | cytosol | 0.32 | 4.55 |
Protein Annotations
| MapMan:19.2.2.1.5.3.3 | Gene3D:3.30.40.10 | GO:A0A078H1J8 | UniProt:A0A078H1J8 | EnsemblPlants:CDY31656 | ProteinID:CDY31656 |
| ProteinID:CDY31656.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00050265001 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF414 | SMART:SM00184 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EF055C | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA05g08910DBnaA05g08910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1J8]
Coordinates
chrLK032277:-:166587..167528
Molecular Weight (calculated)
35331.9 Da
IEP (calculated)
8.073
GRAVY (calculated)
-0.386
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MPADDMPQPG FVKNESDLAI MVATALAFSI FIVGLASVCY RWAGRRFYAD EQSVNLSTHP QHELQTARRG TTRRGIDAAI VESFQTFLYS EVKEQRIGKG
101: GVECVVCLCE FQDNDRLSLM PNCCHVYHAD CVSVWLSDHS TCPLCRVDLV FQQGQGSDPD PELGVVDTTE ARLSESMTWT NRSRPPRSRS MRLPHLRVSG
201: ISLSRSHSTG HCVAEPVENL DRFTLRLPDG VRTRLIKKTL VRSSQGLYRS RSVGSRSARS VFSEQWCNYK NHRRIHSMTL SFTDHLRVWL AGDVVAPPNS
301: EQTSREFRPD DLV
101: GVECVVCLCE FQDNDRLSLM PNCCHVYHAD CVSVWLSDHS TCPLCRVDLV FQQGQGSDPD PELGVVDTTE ARLSESMTWT NRSRPPRSRS MRLPHLRVSG
201: ISLSRSHSTG HCVAEPVENL DRFTLRLPDG VRTRLIKKTL VRSSQGLYRS RSVGSRSARS VFSEQWCNYK NHRRIHSMTL SFTDHLRVWL AGDVVAPPNS
301: EQTSREFRPD DLV
001: MVSFERNIRV LLQSVAYESS ETMVQPGTEI KASDLTLLVI TIILFAIFIV GLASVCFRWT SRQFYSQESI NPFTDSDVES RTSITAVRGL DEAIINSFPT
101: FLYSEVKERR IGIGGVECAV CICEFEDHET LRLMPECCHV FHADCVSVWL SDHSTCPLCR VDLCLQPGER SYLNPEPDLV ESTNSHLFDG VTWTNRNRPS
201: RSWSTRLSQC RVSQILISRS HSTGHSVVQP LDNLDRFTLR LPEEVRRQLT KKTVDNVAFS QARSSRRGYR SRSAGSERSV FSYQRRMHSF SDCAWSTSCG
301: GEAVAPSKDS RRISVEQSQL DDRV
101: FLYSEVKERR IGIGGVECAV CICEFEDHET LRLMPECCHV FHADCVSVWL SDHSTCPLCR VDLCLQPGER SYLNPEPDLV ESTNSHLFDG VTWTNRNRPS
201: RSWSTRLSQC RVSQILISRS HSTGHSVVQP LDNLDRFTLR LPEEVRRQLT KKTVDNVAFS QARSSRRGYR SRSAGSERSV FSYQRRMHSF SDCAWSTSCG
301: GEAVAPSKDS RRISVEQSQL DDRV
Arabidopsis Description
RING/U-box superfamily protein [Source:TAIR;Acc:AT2G34990]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.