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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 75.19 74.23
TraesCS5B01G245800.1 Wheat plasma membrane 75.45 73.74
HORVU5Hr1G069980.1 Barley plasma membrane 72.87 73.44
TraesCS5A01G248100.1 Wheat plasma membrane 75.19 73.3
Zm00001d005936_P001 Maize plasma membrane 72.87 71.76
Zm00001d020789_P001 Maize plasma membrane 70.8 68.84
EER99041 Sorghum endoplasmic reticulum, plasma membrane 71.58 67.23
TraesCS3B01G549900.1 Wheat vacuole 54.26 66.67
TraesCS3D01G495500.1 Wheat vacuole 61.5 61.66
Os08t0484200-01 Rice golgi 55.3 51.82
KRG92822 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.83 47.02
KRH33975 Soybean golgi, plasma membrane, vacuole 42.12 45.4
KRG96857 Soybean vacuole 39.28 40.53
KRH68588 Soybean plasma membrane 37.73 39.89
Bra010641.1-P Field mustard extracellular, golgi 31.27 39.29
CDX90377 Canola extracellular, golgi 31.27 39.29
Os02t0572200-01 Rice plasma membrane 35.14 38.97
Os04t0450300-00 Rice endoplasmic reticulum, golgi 34.11 38.94
CDY53236 Canola plasma membrane 34.88 38.9
CDY39477 Canola extracellular 30.75 38.39
AT4G09100.1 Thale cress extracellular 12.66 37.12
Bra036631.1-P Field mustard plasma membrane 33.33 36.86
CDY19719 Canola endoplasmic reticulum, plasma membrane, vacuole 33.33 36.86
Bra040642.1-P Field mustard plasma membrane 36.69 36.79
CDY18787 Canola plasma membrane 36.69 36.69
AT5G27420.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 34.88 36.68
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 41.86 36.65
VIT_14s0128g00120.t01 Wine grape plasma membrane, plastid, vacuole 39.53 36.43
CDX99986 Canola plasma membrane 32.82 36.39
KRH72413 Soybean cytosol, golgi, vacuole 35.14 36.36
CDX82175 Canola extracellular 21.96 36.32
KRH52998 Soybean endoplasmic reticulum, extracellular, plasma membrane 31.27 36.23
KRH62285 Soybean endoplasmic reticulum, plasma membrane, vacuole 31.78 36.18
AT3G05200.1 Thale cress plasma membrane 36.95 35.93
KRH16796 Soybean cytosol, endoplasmic reticulum, plasma membrane, plastid 34.88 35.62
Solyc03g112340.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 36.43 35.43
VIT_18s0001g06670.t01 Wine grape extracellular, plasma membrane, vacuole 36.43 35.43
CDX80653 Canola plasma membrane 27.65 35.31
AT4G40070.1 Thale cress extracellular, golgi, mitochondrion, plastid 29.46 35.29
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.39 34.87
CDX86162 Canola endoplasmic reticulum, plasma membrane, vacuole 27.39 34.87
CDY25038 Canola plasma membrane 33.33 34.86
PGSC0003DMT400046825 Potato endoplasmic reticulum, plasma membrane, vacuole 35.66 34.67
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 34.37 34.46
CDX86163 Canola plasma membrane 26.61 34.33
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 38.76 34.32
CDY05577 Canola plasma membrane 33.85 34.29
Bra009962.1-P Field mustard mitochondrion, plastid 25.32 34.27
Bra020591.1-P Field mustard plasma membrane 33.59 34.12
CDX75097 Canola extracellular 11.63 32.61
PGSC0003DMT400073575 Potato extracellular, plasma membrane 36.18 32.33
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 31.52 32.28
Os10t0574400-01 Rice mitochondrion, plasma membrane, plastid 16.54 32.16
KRH72412 Soybean nucleus, plasma membrane, plastid 32.04 32.12
CDY31657 Canola extracellular, plasma membrane, plastid 30.49 32.07
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 30.23 31.79
Bra005374.1-P Field mustard plasma membrane, plastid, vacuole 29.72 31.25
Bra038386.1-P Field mustard extracellular 11.11 31.16
CDY48058 Canola extracellular 11.11 31.16
AT2G34990.2 Thale cress plasma membrane 25.84 30.86
Os03t0188200-01 Rice golgi 27.91 30.59
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 28.17 30.36
CDY62007 Canola golgi, plasma membrane 29.46 30.32
PGSC0003DMT400005472 Potato endoplasmic reticulum, plasma membrane, vacuole 30.49 30.18
AT4G09120.1 Thale cress plasma membrane 26.87 30.14
KRH16794 Soybean plasma membrane 30.49 30.1
Bra040855.1-P Field mustard golgi, plasma membrane 29.2 30.05
CDY21367 Canola golgi, plasma membrane 29.2 30.05
CDX82179 Canola plasma membrane 27.13 29.91
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 26.87 29.89
AT1G35330.1 Thale cress endoplasmic reticulum 25.32 29.88
CDY70284 Canola plasma membrane 29.97 29.82
CDY05049 Canola plasma membrane 22.48 29.79
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 26.1 29.79
CDX84270 Canola cytosol, plastid, vacuole 24.03 29.71
Solyc04g074820.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 29.97 29.52
AT1G72200.1 Thale cress plasma membrane 30.75 29.46
Bra005375.1-P Field mustard cytosol, nucleus, plastid 23.77 29.39
CDY31656 Canola cytosol, endoplasmic reticulum, plastid 23.77 29.39
CDX90713 Canola extracellular, golgi, plasma membrane 25.58 29.2
CDX82176 Canola extracellular 27.39 29.04
AT4G09130.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 26.61 28.85
Bra012330.1-P Field mustard golgi, plasma membrane 25.32 28.49
AT4G09110.1 Thale cress endoplasmic reticulum, extracellular, golgi 22.22 28.48
Bra008016.1-P Field mustard plasma membrane 29.46 28.29
CDY03651 Canola plasma membrane 29.46 28.29
AT1G22500.1 Thale cress plasma membrane 27.65 28.08
CDY05145 Canola plasma membrane 20.93 27.27
CDY27787 Canola extracellular, plasma membrane, vacuole 21.19 27.24
CDY12022 Canola plasma membrane 24.81 27.2
Bra008015.1-P Field mustard plasma membrane 27.65 27.02
CDY03652 Canola plasma membrane 27.65 27.02
Bra028075.1-P Field mustard plasma membrane 24.29 26.63
CDY70750 Canola extracellular, mitochondrion, nucleus 20.67 26.4
CDY03116 Canola plasma membrane 24.03 26.35
Os02t0572300-00 Rice nucleus, plastid 28.17 26.08
Solyc12g087860.1.1 Tomato vacuole 25.06 26.01
PGSC0003DMT400045807 Potato plasma membrane 25.32 25.93
Os03t0391100-00 Rice endoplasmic reticulum, golgi 28.17 25.06
CDY12527 Canola extracellular, plasma membrane, vacuole 12.92 21.01
CDY25739 Canola endoplasmic reticulum, extracellular, plasma membrane 12.66 20.59
Os05t0596500-01 Rice endoplasmic reticulum, plasma membrane 19.12 19.22
Os06t0695900-01 Rice endoplasmic reticulum, vacuole 18.6 18.05
CDY50446 Canola mitochondrion 9.82 15.9
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10UniProt:A0A0P0XPJ3ProteinID:BAT08534.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0043161
GO:GO:0061630InterPro:IPR001841InterPro:IPR013083EnsemblPlantsGene:Os09g0468300EnsemblPlants:Os09t0468300-00PFAM:PF13639
PFscan:PS50089PANTHER:PTHR14155PANTHER:PTHR14155:SF322SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI000393C197InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
Hypothetical conserved gene. (Os09t0468300-00)
Coordinates
chr9:-:17790438..17792028
Molecular Weight (calculated)
40485.9 Da
IEP (calculated)
10.203
GRAVY (calculated)
-0.207
Length
387 amino acids
Sequence
(BLAST)
001: MAPARVHSNG RLLMLLLLLA VAGFAAAQPS QDNPPAGYYA TNFSPSMAIV IVVLIAAFFF LGFFSIYVRH CYGGRGDYST TPLPRSGAAR SRRQRGLDQS
101: VLATFPTMAY ADVKAHKSVK GALECAVCIS EFDDDETLRL LPKCSHVFHQ DCIDTWLASH ATCPVCRANL VDGASEPASD VAAELPTAPA PRPEGATPSE
201: AAAPGGEAAA AVVIDVEETE EERIIREEAA ELTRIGSLKR ALRSKSGRAP AARFPRSHST GHSLSSSAAA SAGAERFTLR LPEHVLREVI AAGQLQRTTS
301: LVAFRAGRQG STRRGLRSGG GGGGGEGSSR AGRSVRLGQS GRWPSFLPRT FSARLPAWGS RSTRRGDGDG SSKGGRTAGS GAGAGGK
Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)
001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV
Arabidopsis Description
ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.