Factsheet for Os08t0484200-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G113000.1	Wheat	golgi	65.86	67.83
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	66.34	67.82
TraesCS6B01G151000.1	Wheat	extracellular, golgi, plasma membrane	65.38	66.83
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	65.38	66.5
EES18560	Sorghum	golgi, plasma membrane	61.74	64.89
Zm00001d031261_P001	Maize	golgi	55.21	60.48
Os09t0468300-00	Rice	golgi, plasma membrane	51.82	55.3
AT4G09100.1	Thale cress	extracellular	12.83	40.15
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	32.2	39.58
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	31.96	38.94
Os02t0572200-01	Rice	plasma membrane	31.96	37.82
KRH33975	Soybean	golgi, plasma membrane, vacuole	32.45	37.33
CDY39477	Canola	extracellular	27.12	36.13
Bra010641.1-P	Field mustard	extracellular, golgi	26.88	36.04
CDX90377	Canola	extracellular, golgi	26.88	36.04
CDY53236	Canola	plasma membrane	30.02	35.73
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	38.01	35.52
CDX75097	Canola	extracellular	11.38	34.06
Bra040642.1-P	Field mustard	plasma membrane	31.72	33.94
CDY18787	Canola	plasma membrane	31.72	33.85
KRH72413	Soybean	cytosol, golgi, vacuole	30.51	33.69
KRH68588	Soybean	plasma membrane	29.78	33.61
KRG96857	Soybean	vacuole	30.51	33.6
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	26.15	33.44
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.36	33.24
AT3G05200.1	Thale cress	plasma membrane	31.96	33.17
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	30.27	32.98
CDX82175	Canola	extracellular	18.64	32.91
CDX80653	Canola	plasma membrane	23.97	32.67
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	26.39	32.63
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	33.17	32.62
Bra038386.1-P	Field mustard	extracellular	10.9	32.61
CDY48058	Canola	extracellular	10.9	32.61
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.6	32.57
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.97	32.57
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.97	32.57
Bra009962.1-P	Field mustard	mitochondrion, plastid	22.52	32.52
CDX99986	Canola	plasma membrane	27.36	32.38
Bra036631.1-P	Field mustard	plasma membrane	27.12	32.0
CDX86163	Canola	plasma membrane	23.24	32.0
Os10t0574400-01	Rice	mitochondrion, plasma membrane, plastid	15.25	31.66
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	30.51	31.66
Os02t0759400-01	Rice	endoplasmic reticulum, golgi, mitochondrion, plastid	33.17	31.35
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	27.84	31.25
CDY25038	Canola	plasma membrane	27.6	30.81
CDY05577	Canola	plasma membrane	28.33	30.63
Os03t0188200-01	Rice	golgi	26.15	30.59
Bra020591.1-P	Field mustard	plasma membrane	28.09	30.45
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	29.3	30.4
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	28.33	30.31
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	28.81	29.9
CDX84270	Canola	cytosol, plastid, vacuole	22.28	29.39
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	26.63	29.1
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	22.03	29.07
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	22.03	29.07
CDY31657	Canola	extracellular, plasma membrane, plastid	25.67	28.8
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	24.94	28.69
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	25.18	28.26
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	25.18	28.26
AT4G09120.1	Thale cress	plasma membrane	23.49	28.12
AT1G35330.1	Thale cress	endoplasmic reticulum	22.28	28.05
CDY70284	Canola	plasma membrane	26.39	28.02
KRH16794	Soybean	plasma membrane	26.15	27.55
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	28.81	27.48
KRH72412	Soybean	nucleus, plasma membrane, plastid	25.67	27.46
CDY62007	Canola	golgi, plasma membrane	24.94	27.39
Bra040855.1-P	Field mustard	golgi, plasma membrane	24.7	27.13
CDY21367	Canola	golgi, plasma membrane	24.7	27.13
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	25.67	27.11
Bra008016.1-P	Field mustard	plasma membrane	26.39	27.05
CDY03651	Canola	plasma membrane	26.39	27.05
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	25.67	26.97
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	19.61	26.82
CDX82179	Canola	plasma membrane	22.76	26.78
CDX82176	Canola	extracellular	23.24	26.3
Solyc12g087860.1.1	Tomato	vacuole	23.73	26.27
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	21.55	26.25
AT1G72200.1	Thale cress	plasma membrane	25.67	26.24
AT2G34990.2	Thale cress	plasma membrane	20.58	26.23
Os03t0391100-00	Rice	endoplasmic reticulum, golgi	27.6	26.21
Bra012330.1-P	Field mustard	golgi, plasma membrane	21.79	26.16
CDX90713	Canola	extracellular, golgi, plasma membrane	21.31	25.96
PGSC0003DMT400045807	Potato	plasma membrane	23.73	25.93
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	21.79	25.86
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	22.28	25.77
CDY05049	Canola	plasma membrane	18.16	25.68
Bra008015.1-P	Field mustard	plasma membrane	24.46	25.51
CDY03652	Canola	plasma membrane	24.46	25.51
CDY12022	Canola	plasma membrane	21.79	25.5
AT1G22500.1	Thale cress	plasma membrane	23.49	25.46
Bra028075.1-P	Field mustard	plasma membrane	21.55	25.21
CDY03116	Canola	plasma membrane	21.07	24.65
Os02t0572300-00	Rice	nucleus, plastid	24.7	24.4
CDY70750	Canola	extracellular, mitochondrion, nucleus	16.71	22.77
CDY05145	Canola	plasma membrane	15.74	21.89
CDY27787	Canola	extracellular, plasma membrane, vacuole	15.74	21.59
Os05t0596500-01	Rice	endoplasmic reticulum, plasma membrane	17.92	19.22
Os06t0695900-01	Rice	endoplasmic reticulum, vacuole	17.43	18.05
CDY12527	Canola	extracellular, plasma membrane, vacuole	9.69	16.81
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	9.69	16.81
CDY50446	Canola	mitochondrion	8.23	14.23

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EntrezGene:4345870	EMBL:AK241976	ProteinID:BAD09305.1	ProteinID:BAD10704.1
ProteinID:BAF23994.1	ProteinID:BAT05953.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161	GO:GO:0061630
InterPro:IPR001841	InterPro:IPR013083	EnsemblPlantsGene:Os08g0484200	EnsemblPlants:Os08t0484200-01	PFAM:PF13639	PFscan:PS50089
PANTHER:PTHR14155	PANTHER:PTHR14155:SF322	UniProt:Q6YTT7	SMART:SM00184	SMART:SM01197	SUPFAM:SSF57850
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000023ADA8	RefSeq:XP_015648896.1	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0484200-01)

Coordinates

chr8:+:23921006..23922529

Molecular Weight (calculated)

42716.8 Da

IEP (calculated)

9.812

GRAVY (calculated)

-0.118

Length

413 amino acids

Sequence
(BLAST)

001: MGSPRGRRRG DNGRLLLLAA AAVVIASLVG GGAAQPTTSG PGPNYFNPKS FNPSMAVVIV VLVTAFFFLG FFSIYIRRCA GGPLGGPGGY GVGGGGGGRV
101: GGGFTFAAAR SRRVRGLDPA VLGAFPTMAY ADVKAHKAGK GALECAVCLS EFDDDETLRL LPRCSHAFHA DCIDAWLASH VTCPVCRANL AFDAGVPPPP
201: LAPPHALTTG QDVAAAPPQP AAPEQVTVDV VVADAEETEE RIRREEAAEL MRIGSVKRAL RSKSGRRPPQ FPRSHTTGHS LAAAAAVPAT ADDAAERYTL
301: RLPDHVLREI VTSARLRRTT SLQSFRTTAA AGGGARAGRS VRLGQSGRWS NVSSLMRTFS ARLPAWGSAR RGAEADSPGK DGAKVAGDCT ASVEQHCDGG
401: GGGACPRPLG DHV

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.