Factsheet for HORVU6Hr1G022590.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

nucleus 2
mitochondrion 3
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G113000.1	Wheat	golgi	88.37	89.03
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	88.37	87.93
TraesCS6B01G151000.1	Wheat	extracellular, golgi, plasma membrane	87.13	87.13
Os08t0484200-01	Rice	golgi	67.82	66.34
EES18560	Sorghum	golgi, plasma membrane	61.14	62.85
Zm00001d031261_P001	Maize	golgi	54.7	58.62
HORVU5Hr1G069980.1	Barley	plasma membrane	54.7	57.55
HORVU3Hr1G007990.1	Barley	cytosol	10.89	49.44
HORVU6Hr1G051510.1	Barley	nucleus	8.91	41.38
AT4G09100.1	Thale cress	extracellular	13.37	40.91
HORVU5Hr1G086510.1	Barley	mitochondrion	8.91	40.91
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	33.42	40.18
KRH33975	Soybean	golgi, plasma membrane, vacuole	33.91	38.16
KRH68588	Soybean	plasma membrane	33.42	36.89
CDY53236	Canola	plasma membrane	31.19	36.31
HORVU4Hr1G080840.1	Barley	cytosol	21.29	36.29
KRG96857	Soybean	vacuole	33.66	36.27
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	18.81	35.85
CDX75097	Canola	extracellular	12.13	35.51
HORVU7Hr1G096980.1	Barley	extracellular, vacuole	18.07	35.27
CDY39477	Canola	extracellular	26.98	35.16
Bra010641.1-P	Field mustard	extracellular, golgi	26.73	35.06
CDX90377	Canola	extracellular, golgi	26.73	35.06
CDY18787	Canola	plasma membrane	32.67	34.11
Bra038386.1-P	Field mustard	extracellular	11.63	34.06
CDY48058	Canola	extracellular	11.63	34.06
Bra040642.1-P	Field mustard	plasma membrane	32.43	33.94
AT3G05200.1	Thale cress	plasma membrane	32.92	33.42
HORVU1Hr1G001970.1	Barley	mitochondrion	7.43	33.33
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	34.16	32.86
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.23	32.35
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	30.2	32.19
KRH72413	Soybean	cytosol, golgi, vacuole	29.7	32.09
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	29.21	32.07
CDX82175	Canola	extracellular	18.56	32.05
CDX80653	Canola	plasma membrane	24.01	32.01
Bra036631.1-P	Field mustard	plasma membrane	27.72	32.0
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.72	32.0
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	26.24	31.74
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	25.25	31.58
CDX99986	Canola	plasma membrane	27.23	31.52
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.95	31.35
HORVU6Hr1G077610.1	Barley	plasma membrane	31.44	31.28
HORVU4Hr1G004070.1	Barley	cytosol	18.81	31.28
HORVU5Hr1G106000.1	Barley	golgi	26.49	31.2
Bra009962.1-P	Field mustard	mitochondrion, plastid	22.03	31.12
HORVU4Hr1G078260.1	Barley	plasma membrane	27.48	31.09
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.27	30.92
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.27	30.92
HORVU3Hr1G098880.1	Barley	plasma membrane	26.24	30.9
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	30.2	30.65
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	29.95	30.4
CDX86163	Canola	plasma membrane	22.52	30.33
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	29.7	30.15
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	30.69	29.81
CDY05577	Canola	plasma membrane	27.97	29.58
CDY25038	Canola	plasma membrane	26.98	29.46
CDX84270	Canola	cytosol, plastid, vacuole	22.77	29.39
Bra020591.1-P	Field mustard	plasma membrane	27.48	29.13
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	27.23	29.1
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	22.52	29.07
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	22.52	29.07
AT4G09120.1	Thale cress	plasma membrane	24.75	28.99
CDY31657	Canola	extracellular, plasma membrane, plastid	25.99	28.53
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	30.45	28.41
AT1G35330.1	Thale cress	endoplasmic reticulum	23.02	28.35
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	25.5	27.99
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	25.5	27.99
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	24.75	27.86
CDY70284	Canola	plasma membrane	26.73	27.76
KRH72412	Soybean	nucleus, plasma membrane, plastid	26.24	27.46
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	20.3	27.15
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	22.77	27.14
CDX90713	Canola	extracellular, golgi, plasma membrane	22.77	27.14
CDX82176	Canola	extracellular	24.5	27.12
KRH16794	Soybean	plasma membrane	26.24	27.04
HORVU4Hr1G057610.1	Barley	plastid	27.48	26.94
CDY05049	Canola	plasma membrane	19.31	26.71
CDY12022	Canola	plasma membrane	23.27	26.63
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	23.51	26.61
AT2G34990.2	Thale cress	plasma membrane	21.29	26.54
AT1G72200.1	Thale cress	plasma membrane	26.49	26.49
CDY03116	Canola	plasma membrane	23.02	26.35
Bra008016.1-P	Field mustard	plasma membrane	26.24	26.3
CDY03651	Canola	plasma membrane	26.24	26.3
CDX82179	Canola	plasma membrane	22.77	26.21
HORVU7Hr1G121570.1	Barley	endoplasmic reticulum	16.34	26.09
Bra040855.1-P	Field mustard	golgi, plasma membrane	24.26	26.06
CDY21367	Canola	golgi, plasma membrane	24.26	26.06
CDY62007	Canola	golgi, plasma membrane	24.26	26.06
Bra028075.1-P	Field mustard	plasma membrane	22.77	26.06
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	25.0	25.83
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	22.03	25.57
Solyc12g087860.1.1	Tomato	vacuole	23.51	25.47
PGSC0003DMT400045807	Potato	plasma membrane	23.76	25.4
Bra012330.1-P	Field mustard	golgi, plasma membrane	21.53	25.29
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	24.5	25.19
Bra008015.1-P	Field mustard	plasma membrane	24.26	24.75
CDY03652	Canola	plasma membrane	24.26	24.75
AT1G22500.1	Thale cress	plasma membrane	22.77	24.15
CDY27787	Canola	extracellular, plasma membrane, vacuole	17.57	23.59
CDY05145	Canola	plasma membrane	17.33	23.57
CDY70750	Canola	extracellular, mitochondrion, nucleus	17.08	22.77
HORVU1Hr1G095220.1	Barley	golgi, plasma membrane	17.57	18.02
CDY12527	Canola	extracellular, plasma membrane, vacuole	10.4	17.65
HORVU7Hr1G098470.1	Barley	plastid	17.33	17.5
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.15	17.23
CDY50446	Canola	mitochondrion	9.65	16.32

Protein Annotations

MapMan:19.2.2.1.5.3.3	Gene3D:3.30.40.10	EMBL:AK372568	UniProt:F2E8U4	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:HORVU6Hr1G022590	EnsemblPlants:HORVU6Hr1G022590.1	InterPro:IPR001841	InterPro:IPR013083	PFAM:PF13639
PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF322	SMART:SM00184	SMART:SM01197	SUPFAM:SSF57850
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00020081BA	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E8U4]

Coordinates

chrchr6H:-:72175515..72177264

Molecular Weight (calculated)

42256.3 Da

IEP (calculated)

8.999

GRAVY (calculated)

-0.108

Length

404 amino acids

Sequence
(BLAST)

001: MNPTRGRRNG RSSFLLLIAL VTAAADIAAA QPAGQGGPSY FNPKFNPSMT VIIVVLVTAF FFLGFFSIYI RRCAGGPLGG PGEDLGAPGA RMGSIAFLTS
101: GAARSRRMRG LDPAALEALP TMAYADVKAH KVGKGELECA VCLSEFDDDD TLRLLPKCSH AFHADCIDAW LASHVTCPVC RANLVPGAEA LAASAAAATS
201: ATPERDVVAA TSAPQPAQET VTAPPEQVTV VIADAADETE EERIRREEAA ELVRIGSVKR ALRSKSARSP AAQFPRSHTT GHSLAAALAD SADRYTLRLP
301: EHVLREVLAS GKLQRTKSLQ AFREGRAGGS TRHGSRSVRL GQSGRWPNMS FFLGLSFSAW GSLRRGEADA PGKGGAKVAG DGTPAAEQGC DGGACPLPLG
401: GRRV

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.