Factsheet for HORVU7Hr1G096980.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G001970.1	Barley	mitochondrion	32.37	74.44
HORVU5Hr1G086510.1	Barley	mitochondrion	30.43	71.59
HORVU4Hr1G004070.1	Barley	cytosol	82.13	69.96
HORVU3Hr1G007990.1	Barley	cytosol	27.54	64.04
HORVU6Hr1G051510.1	Barley	nucleus	22.71	54.02
Os04t0450300-00	Rice	endoplasmic reticulum, golgi	71.5	43.66
Zm00001d003499_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	69.57	37.11
KXG26428	Sorghum	plasma membrane	72.46	36.95
HORVU7Hr1G121570.1	Barley	endoplasmic reticulum	29.95	24.51
HORVU4Hr1G080840.1	Barley	cytosol	27.05	23.63
HORVU5Hr1G069980.1	Barley	plasma membrane	39.61	21.35
GSMUA_Achr8P09280_001	Banana	cytosol	4.83	20.83
HORVU5Hr1G106000.1	Barley	golgi	32.85	19.83
HORVU3Hr1G098880.1	Barley	plasma membrane	32.37	19.53
HORVU6Hr1G022590.1	Barley	golgi, mitochondrion	35.27	18.07
KRH38505	Soybean	plasma membrane, vacuole	23.67	17.19
HORVU6Hr1G077610.1	Barley	plasma membrane	33.33	17.0
HORVU4Hr1G078260.1	Barley	plasma membrane	26.09	15.13
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	25.6	12.74
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	12.08	11.79
HORVU4Hr1G057610.1	Barley	plastid	22.71	11.41
KRH13267	Soybean	plasma membrane	7.73	9.82
HORVU7Hr1G098470.1	Barley	plastid	17.87	9.25
HORVU1Hr1G095220.1	Barley	golgi, plasma membrane	16.91	8.88

Protein Annotations

EnsemblPlants:HORVU7Hr1G096980.1	EnsemblPlantsGene:HORVU7Hr1G096980	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0008270
InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_H2	PANTHER:PTHR14155
PANTHER:PTHR14155:SF263	PFAM:PF12678	PFscan:PS50089	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF57850
UniParc:UPI000B46D779	UniProt:A0A287XH78	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:590252526..590253526

Molecular Weight (calculated)

22845.0 Da

IEP (calculated)

7.329

GRAVY (calculated)

-0.600

Length

207 amino acids

Sequence
(BLAST)

001: CFCSPTYVLH LLLGLLPHCS HAFHPECIDP WLEARITCPL CRANLEKPPP PLPPAVAPPS PEQVAWRQPS PSSSPPHTVA IPVQKEEESD EDDRKEEAME
101: LEMPRNERQA ARLPRSHSTG HSLFAASAAA AERSDHERFT LRLPHHVREQ VLRSRRLRHA TSLIDLAGAS PEGSVRGGRP VGGGGSYGNA DGGRRWQAFL
201: ARTMSWD

Best Arabidopsis Sequence Match ( AT3G05200.1 )
(BLAST)

001: MRSSDHMAFA GVLPIVFLLI LSSADLAASQ SQPGPTNQPY NYGRLSPAMA VIVVILIAAL FFMGFFSIYF RHCSGVPDAG VSPAGGARSR ATVNAAARGL
101: DVSVVETFPT FLYSDVKTQK LGKGELECAI CLNEFEDDET LRLLPKCDHV FHPHCIDAWL EAHVTCPVCR ANLAEQVAEG ESVEPGGTEP DLELQQVVVN
201: PEPVVTAPVP EQLVTSEVDS RRLPGVPVDL KRVKFSRSHT TGHSVVQPGE CTERFTLRLP EDVRKRIMKD WKLNRTNSLL VLPRGGSSRR GKPIDRSRAR
301: SDRWLFRKTP SFLWRSRDDG SIRLGATGSV RASAVPNSTG SDSVRAGDRW AFLRNASFLW RNSSVHVPRG GVNKDGEGTS VKSTGASGST SGSVRLPV

Arabidopsis Description

ATL6E3 ubiquitin-protein ligase ATL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.