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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 4
  • plastid 2
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid, vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31657 Canola extracellular, plasma membrane, plastid 98.1 98.1
CDX84269 Canola endoplasmic reticulum, plasma membrane, plastid 97.01 97.01
AT2G35000.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 76.36 74.34
Bra000673.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 36.14 39.23
Bra028075.1-P Field mustard plasma membrane 36.41 37.96
Bra038386.1-P Field mustard extracellular 13.59 36.23
GSMUA_Achr6P30500_001 Banana plasma membrane 25.82 32.53
GSMUA_Achr5P17910_001 Banana golgi, plasma membrane, vacuole 29.62 31.59
Bra040642.1-P Field mustard plasma membrane 32.88 31.35
Bra005375.1-P Field mustard cytosol, nucleus, plastid 26.63 31.31
Bra036631.1-P Field mustard plasma membrane 29.62 31.14
Bra009960.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 25.27 30.59
Bra040855.1-P Field mustard golgi, plasma membrane 31.25 30.59
Bra010641.1-P Field mustard extracellular, golgi 25.54 30.52
GSMUA_AchrUn_... Banana golgi, plasma membrane 29.08 30.31
TraesCS5D01G254900.1 Wheat golgi, plasma membrane 32.07 30.1
GSMUA_Achr3P20400_001 Banana mitochondrion 27.99 29.94
Bra003887.1-P Field mustard endoplasmic reticulum, plasma membrane 29.08 29.8
Os09t0468300-00 Rice golgi, plasma membrane 31.25 29.72
Bra012330.1-P Field mustard golgi, plasma membrane 27.72 29.65
Bra011991.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 11.41 29.58
GSMUA_Achr7P12810_001 Banana endoplasmic reticulum, plasma membrane, vacuole 24.46 29.51
HORVU5Hr1G069980.1 Barley plasma membrane 30.71 29.43
Bra009962.1-P Field mustard mitochondrion, plastid 22.83 29.37
TraesCS5B01G245800.1 Wheat plasma membrane 31.52 29.29
Bra008015.1-P Field mustard plasma membrane 31.52 29.29
Bra039454.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 30.71 29.27
Zm00001d005936_P001 Maize plasma membrane 31.25 29.26
Bra008016.1-P Field mustard plasma membrane 31.79 29.03
TraesCS5A01G248100.1 Wheat plasma membrane 31.25 28.97
Bra020591.1-P Field mustard plasma membrane 29.62 28.61
GSMUA_Achr10P... Banana plasma membrane 29.62 28.09
HORVU4Hr1G022090.1 Barley endoplasmic reticulum, golgi, plasma membrane 16.03 27.83
TraesCS3D01G495500.1 Wheat vacuole 28.8 27.46
EER99041 Sorghum endoplasmic reticulum, plasma membrane 30.71 27.43
Zm00001d020789_P001 Maize plasma membrane 29.62 27.39
TraesCS3B01G549900.1 Wheat vacuole 23.1 26.98
Bra025008.1-P Field mustard plastid 20.38 26.13
GSMUA_AchrUn_... Banana plastid 25.54 26.11
GSMUA_Achr3P06680_001 Banana mitochondrion, plastid 27.45 26.03
Zm00001d031261_P001 Maize golgi 26.63 25.99
EES18560 Sorghum golgi, plasma membrane 27.72 25.95
HORVU4Hr1G080840.1 Barley cytosol 16.58 25.74
HORVU6Hr1G022590.1 Barley golgi, mitochondrion 27.99 25.5
TraesCS6D01G113000.1 Wheat golgi 27.45 25.19
Os08t0484200-01 Rice golgi 28.26 25.18
GSMUA_Achr9P15010_001 Banana endoplasmic reticulum, plasma membrane 24.46 25.14
TraesCS6B01G346000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 27.45 25.12
TraesCS6B01G151000.1 Wheat extracellular, golgi, plasma membrane 27.45 25.0
EER92732 Sorghum golgi 25.0 25.0
HORVU4Hr1G078260.1 Barley plasma membrane 24.18 24.93
Bra017535.1-P Field mustard nucleus, plasma membrane, plastid 19.02 24.91
Bra013268.1-P Field mustard plasma membrane 19.84 24.83
TraesCS4B01G304400.1 Wheat plasma membrane 23.64 24.51
TraesCS4A01G404600.1 Wheat plasma membrane 23.64 24.51
TraesCS6A01G315600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.9 24.44
TraesCS6A01G122800.1 Wheat endoplasmic reticulum, golgi, mitochondrion 26.9 24.38
HORVU6Hr1G077610.1 Barley plasma membrane 26.9 24.38
Os03t0188200-01 Rice golgi 23.37 24.36
TraesCS4D01G302600.1 Wheat plasma membrane 23.37 24.23
TraesCS6D01G294800.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 26.36 23.95
Bra001139.1-P Field mustard extracellular, golgi, plasma membrane 22.55 23.85
Zm00001d037192_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 27.17 23.75
HORVU4Hr1G057610.1 Barley plastid 26.36 23.54
Os06t0218300-01 Rice endoplasmic reticulum, extracellular, golgi 28.26 23.53
Zm00001d052189_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 26.36 23.37
Zm00001d027983_P001 Maize plasma membrane, plastid 22.83 23.2
Zm00001d048230_P001 Maize golgi 23.91 23.16
TraesCS4A01G104900.1 Wheat mitochondrion 24.18 23.0
Os03t0391100-00 Rice endoplasmic reticulum, golgi 27.17 22.99
TraesCS7B01G081700.1 Wheat golgi 25.82 22.95
OQU85775 Sorghum golgi, plasma membrane, vacuole 26.36 22.93
Zm00001d018122_P001 Maize vacuole 26.09 22.91
Os02t0759400-01 Rice endoplasmic reticulum, golgi, mitochondrion, plastid 27.17 22.88
TraesCS7D01G178000.1 Wheat golgi 25.27 22.79
TraesCS7A01G176700.1 Wheat golgi 25.27 22.41
TraesCS4D01G200100.1 Wheat plastid 25.0 22.22
Zm00001d029395_P001 Maize plasma membrane, plastid 22.28 21.41
TraesCS4B01G199100.1 Wheat plastid 25.0 20.58
KXG39223 Sorghum golgi, plasma membrane, plastid, vacuole 21.2 20.16
Bra005343.1-P Field mustard plastid 14.13 18.64
OQU76061 Sorghum cytosol, peroxisome, plasma membrane 27.45 18.53
HORVU7Hr1G036380.2 Barley endoplasmic reticulum 20.11 17.79
Bra009136.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 17.12 15.59
Bra017320.1-P Field mustard extracellular, nucleus, plasma membrane 14.13 15.48
Bra011068.1-P Field mustard endoplasmic reticulum, plasma membrane 17.39 15.35
Bra010349.1-P Field mustard endoplasmic reticulum, plasma membrane 16.85 14.76
Bra024178.1-P Field mustard endoplasmic reticulum, plasma membrane 16.58 14.52
Bra012630.1-P Field mustard nucleus 19.02 11.31
Protein Annotations
MapMan:19.2.2.1.5.3.3Gene3D:3.30.40.10EnsemblPlantsGene:Bra005374EnsemblPlants:Bra005374.1EnsemblPlants:Bra005374.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0004842GO:GO:0005575GO:GO:0006464GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0009719GO:GO:0009987GO:GO:0010200
GO:GO:0016020GO:GO:0016021GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0050832
InterPro:IPR001841InterPro:IPR013083UniProt:M4CMD6PFAM:PF13639PFscan:PS50089PANTHER:PTHR14155
PANTHER:PTHR14155:SF414SMART:SM00184SUPFAM:SSF57850SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0002547F29
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg:::
Description
AT2G35000 (E=5e-108) | zinc finger (C3HC4-type RING finger) family protein
Coordinates
chrA05:+:5091972..5093078
Molecular Weight (calculated)
40082.7 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.141
Length
368 amino acids
Sequence
(BLAST)
001: MAIIYNRWIP RSASLLLLLL LLQSVPYGSG QPTPPVPQTR ASDPVVIVIT VLFFVIFSMV FGSIFCRRSS VYSRPSVFGL TDADAAVGVV RIRRSAARGL
101: APAVIESFPT FIYSEVKSVR IGKGGVECAV CLCEFEDEET LRLMPPCCHV FHADCVDVWL SERSTCPLCR ADLVQKQGDG GSDLSSDPGT VSSGSDPERG
201: VLEASDRHLL DGVTWTNSNN ITPRSKSTGL ASWSITGLLF PRSHSTGHSL VQPVGDLDRF TLRLPDDVHR QLMKTGTIRN VTLPQARSSR SGYRSGSVGS
301: GTGGVFSYGR KDHNHNRRLH SLSFSFSFRS GSVRSTFGGD TVAPPKNFPA ATESGERSFE RLRPDERV
Best Arabidopsis Sequence Match ( AT2G35000.1 )
(BLAST)
001: MAILDTKSSR WIPHNLLFLL LLLLLQSVPY GFGQTQTTPP GTTKTKPNDP VVVVITVLFL VIFFMVFGSI FCRRSNAQFS RSSIFRSTDA DAESQVVRIR
101: RLTARGLDAE AIETFPTFLY SEVKAVRIGK GGVECAVCLC EFEDDETLRL MPPCCHVFHA DCVDVWLSEH STCPLCRADL VLNQQGDDDD STESYSGTDP
201: GTISSSTDPE RGMVLESSDA HLLDAVTWSN SNITPRSKST GLSSWQITGI LFPRSHSTGH SLIQPAGNLD RFTLRLPDDV RRQLMKTSRT MGHVALLPQA
301: RSSRSGYRSG SVGSERSAFP YGRKSNNNNR RLHSLSFSFS FRSGSVRSTF SGDAPKNLPT SIEAGERSFE RLRPDERV
Arabidopsis Description
ATL9E3 ubiquitin-protein ligase ATL9 [Source:UniProtKB/Swiss-Prot;Acc:O64763]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.