Factsheet for TraesCS7A01G176700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
golgi 4
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G178000.1	Wheat	golgi	94.22	95.83
TraesCS7B01G081700.1	Wheat	golgi	93.25	93.48
HORVU4Hr1G022090.1	Barley	endoplasmic reticulum, golgi, plasma membrane	42.89	83.96
HORVU7Hr1G036380.2	Barley	endoplasmic reticulum	78.07	77.88
HORVU4Hr1G080840.1	Barley	cytosol	42.89	75.11
Os06t0218300-01	Rice	endoplasmic reticulum, extracellular, golgi	65.06	61.09
Zm00001d037192_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	61.93	61.05
OQU76061	Sorghum	cytosol, peroxisome, plasma membrane	61.93	47.16
TraesCS6A01G315600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	41.45	42.47
AT4G09100.1	Thale cress	extracellular	12.05	37.88
TraesCS5A01G248100.1	Wheat	plasma membrane	34.94	36.52
TraesCS6A01G122800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	35.18	35.96
KRG92822	Soybean	endoplasmic reticulum, plasma membrane, vacuole	28.43	35.12
KRH33975	Soybean	golgi, plasma membrane, vacuole	28.92	33.43
TraesCS3A01G051000.1	Wheat	vacuole	26.02	32.63
TraesCS2A01G318200.1	Wheat	endoplasmic reticulum, golgi, vacuole	29.4	32.11
CDX82175	Canola	extracellular	17.83	31.62
KRH72413	Soybean	cytosol, golgi, vacuole	28.19	31.28
CDX75097	Canola	extracellular	10.36	31.16
KRH16796	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.95	30.61
Bra010641.1-P	Field mustard	extracellular, golgi	22.65	30.52
CDX90377	Canola	extracellular, golgi	22.65	30.52
Bra038386.1-P	Field mustard	extracellular	10.12	30.43
CDY48058	Canola	extracellular	10.12	30.43
KRG96857	Soybean	vacuole	27.47	30.4
CDY39477	Canola	extracellular	22.65	30.32
KRH52998	Soybean	endoplasmic reticulum, extracellular, plasma membrane	24.34	30.24
CDY19719	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.3	30.0
KRH68588	Soybean	plasma membrane	26.27	29.78
Bra036631.1-P	Field mustard	plasma membrane	25.06	29.71
CDX99986	Canola	plasma membrane	24.82	29.51
KRH62285	Soybean	endoplasmic reticulum, plasma membrane, vacuole	24.1	29.41
CDY53236	Canola	plasma membrane	24.34	29.11
TraesCS3A01G459700.1	Wheat	vacuole	23.61	28.66
Bra009960.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.96	28.62
CDX86162	Canola	endoplasmic reticulum, plasma membrane, vacuole	20.96	28.62
AT5G27420.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	25.3	28.53
TraesCS1A01G192600.1	Wheat	plastid	14.46	28.44
VIT_14s0128g00120.t01	Wine grape	plasma membrane, plastid, vacuole	28.67	28.33
CDX84270	Canola	cytosol, plastid, vacuole	21.2	28.11
CDY18787	Canola	plasma membrane	25.78	27.65
Solyc03g112340.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	26.51	27.64
VIT_18s0001g06670.t01	Wine grape	extracellular, plasma membrane, vacuole	26.51	27.64
TraesCS4A01G404600.1	Wheat	plasma membrane	23.61	27.61
CDY25038	Canola	plasma membrane	24.58	27.57
Bra005375.1-P	Field mustard	cytosol, nucleus, plastid	20.72	27.48
CDY31656	Canola	cytosol, endoplasmic reticulum, plastid	20.72	27.48
Bra039454.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	25.54	27.46
AT1G35330.1	Thale cress	endoplasmic reticulum	21.69	27.44
PGSC0003DMT400046825	Potato	endoplasmic reticulum, plasma membrane, vacuole	26.27	27.39
Bra040642.1-P	Field mustard	plasma membrane	25.3	27.2
CDX80653	Canola	plasma membrane	19.76	27.06
CDY05577	Canola	plasma membrane	24.82	26.96
AT4G40070.1	Thale cress	extracellular, golgi, mitochondrion, plastid	20.96	26.93
Bra020591.1-P	Field mustard	plasma membrane	24.58	26.77
CDX86163	Canola	plasma membrane	19.28	26.67
Bra009962.1-P	Field mustard	mitochondrion, plastid	18.31	26.57
AT2G34990.2	Thale cress	plasma membrane	20.72	26.54
AT2G35000.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	24.1	26.45
AT3G05200.1	Thale cress	plasma membrane	25.3	26.38
Bra003887.1-P	Field mustard	endoplasmic reticulum, plasma membrane	22.65	26.18
CDY70284	Canola	plasma membrane	24.34	25.96
PGSC0003DMT400005472	Potato	endoplasmic reticulum, plasma membrane, vacuole	24.34	25.83
Bra028075.1-P	Field mustard	plasma membrane	21.93	25.78
CDY12022	Canola	plasma membrane	21.93	25.78
CDY31657	Canola	extracellular, plasma membrane, plastid	22.65	25.54
AT4G09120.1	Thale cress	plasma membrane	21.2	25.51
CDY03116	Canola	plasma membrane	21.69	25.5
AT1G72200.1	Thale cress	plasma membrane	24.82	25.5
TraesCS4A01G104900.1	Wheat	mitochondrion	23.61	25.32
Bra005374.1-P	Field mustard	plasma membrane, plastid, vacuole	22.41	25.27
CDX84269	Canola	endoplasmic reticulum, plasma membrane, plastid	22.41	25.27
CDX82176	Canola	extracellular	22.17	25.21
Solyc04g074820.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	23.86	25.19
PGSC0003DMT400073575	Potato	extracellular, plasma membrane	26.27	25.17
KRH72412	Soybean	nucleus, plasma membrane, plastid	23.37	25.13
Bra008016.1-P	Field mustard	plasma membrane	24.34	25.06
CDY03651	Canola	plasma membrane	24.34	25.06
AT4G09130.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	21.45	24.93
TraesCS2A01G501100.1	Wheat	plastid	11.81	24.87
Bra008015.1-P	Field mustard	plasma membrane	23.61	24.75
CDY03652	Canola	plasma membrane	23.61	24.75
TraesCS7A01G551400.1	Wheat	golgi, plastid	14.46	24.59
AT4G09110.1	Thale cress	endoplasmic reticulum, extracellular, golgi	17.83	24.5
CDX82179	Canola	plasma membrane	20.72	24.5
KRH16794	Soybean	plasma membrane	23.13	24.49
CDY62007	Canola	golgi, plasma membrane	21.93	24.2
Solyc12g087860.1.1	Tomato	vacuole	21.69	24.13
CDY05049	Canola	plasma membrane	16.87	23.97
Bra040855.1-P	Field mustard	golgi, plasma membrane	21.69	23.94
CDY21367	Canola	golgi, plasma membrane	21.69	23.94
Bra000673.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	19.28	23.6
PGSC0003DMT400045807	Potato	plasma membrane	21.45	23.55
CDX90713	Canola	extracellular, golgi, plasma membrane	19.04	23.3
Bra001139.1-P	Field mustard	extracellular, golgi, plasma membrane	19.52	23.28
Bra012330.1-P	Field mustard	golgi, plasma membrane	19.28	23.26
AT1G22500.1	Thale cress	plasma membrane	20.48	22.31
CDY70750	Canola	extracellular, mitochondrion, nucleus	15.9	21.78
CDY05145	Canola	plasma membrane	15.42	21.55
CDY27787	Canola	extracellular, plasma membrane, vacuole	14.94	20.6
CDY12527	Canola	extracellular, plasma membrane, vacuole	10.12	17.65
CDY25739	Canola	endoplasmic reticulum, extracellular, plasma membrane	10.12	17.65
TraesCS1A01G444900.1	Wheat	golgi, plasma membrane	15.42	16.29
CDY50446	Canola	mitochondrion	8.92	15.48

Protein Annotations

EnsemblPlants:TraesCS7A01G176700.1	EnsemblPlantsGene:TraesCS7A01G176700	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155	PANTHER:PTHR14155:SF281	PFAM:PF13639	PFscan:PS50089	SEG:seg
SignalP:SignalP-noTM	SMART:SM00184	SUPFAM:SSF57850	TIGR:cd16454	TMHMM:TMhelix	MapMan:19.2.2.1.5.3.3

Description

No Description!

Coordinates

chr7A:-:130090446..130092153

Molecular Weight (calculated)

44823.7 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.432

Length

415 amino acids

Sequence
(BLAST)

001: MPTRTRTPTP GRHALLLAAL VLAAGAVAQA DDDDAWDRKS DHGGGRGVVY GARKPPSFSA PMVVLLVALI ATFFFIGFFS IYIRQCGRGN SPTIPAAAFL
101: VLSRQQEQQE QQQQARPRGL DPEVVASFPA MTYAEARALR DKGGDDAAVL ECAVCLSEFE DGDQLRLLPK CSHAFHPDCI GEWLAGHVTC PVCRCSLAPE
201: EPAPAAAEEN GAGAEEQRAP EVAIDMDREG DGEAQEERMG EAAELERIGS LRRAVRSRSG RPFSRAHSTG HSLSARFDGD LERFTLRLPE HVRRDMVAAG
301: EESLRRTVAR DAGARSARIG RSDRWPSFIA RTFSSRVPFW AASRRAPDAE PVGAPAPTTP TAPPLPRTVR EKAPDGPVVG SATNKGSVRF DCLGGRVDGD
401: SEEEPEEEKA IVRRA

Best Arabidopsis Sequence Match ( AT5G27420.1 )
(BLAST)

001: MDPIKHISLP VLVLFLLLSV SAGQPGTPDQ RHDPYAYSGS LSPAMAVVVV VVIAALFFMG FFTVYIRHCT GAVDGSVTPA GGARRRVTNA TVARGLDAET
101: IETFPTFVYS EVKTQKIGKG ALECAICLNE FEDDETLRLL PKCDHVFHPH CIGAWLQGHV TCPVCRTNLA EQTPEPEVVV ETDLEAQQQS AVPVPVVELP
201: RVKFPRSHTT GHSVVLPGES TDRFTLRVPE ELRKKIMANW KLNRSNSVFV LPRGGSSRSG KQVDRSRAKS DRWLFRKTPS FLWRNRDDGS IRLGGTGSVR
301: GNSVTSPSGD SVRADRWAFL RNPSFLWRNT TPVPSPRVEV NNKDGEGTSS VQHIGTVGST SGSLRLPV

Arabidopsis Description

ATL31E3 ubiquitin-protein ligase ATL31 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGA5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.